Ficedula albicollis (collared flycatcher): 101815369
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Entry
101815369 CDS
T02815
Symbol
PCDH9
Name
(RefSeq) protocadherin 9
KO
K16498
protocadherin delta 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
101815369 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fab01009
]
101815369 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101815369 (PCDH9)
Protein phosphatases and associated proteins [BR:
fab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101815369 (PCDH9)
Cell adhesion molecules [BR:
fab04515
]
Cadherins
Protocadherins
101815369 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
RCR
V_ATPase_I
EphA2_TM
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
101815369
NCBI-ProteinID:
XP_005037872
LinkDB
All DBs
Position
1:56115235..56820600
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AA seq
1203 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPSTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH
LPDGSQESCSDSGLGDHEPVGGGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSD
GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLV
NGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNTGNHMTDIPLANLKSYKQAPGSVESPKE
HQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggccgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaacgtgcccata
ggaaacataccaaaggacctgaacatttctcatatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcacctctggtcaaagtgtccagt
aacacgggggaaatctttacaacatctaacagaatagacagagaaaaactatgtgctgga
gcttcctatgcagaagaaaatgagtgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaatgcgcct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacgggtttcaatggtgtgcagcactatgag
ttgttaaacgggcagagtgtctttggactggatattgtagaaactccagaaggggagaaa
tggcctcagctgattgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtagaggatggaggtaccccccagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtctttaaagagagtcaagtagaggtccat
ataccagagaatgcccctgtaggcacctctgtaattcagcttcatgctacagatgctgat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagcc
cgggcaaccgtcaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgata
tgtttcattgagagagaggtccccttccacttgaaagctgtttacgacaaccagtatttg
ttagagacctcctccttgttggactatgagggcaccaaagaattcagctttaaaattgtg
gcttctgattccggcaagcccagtttgaaccagactgccctggtaagagttaagctggag
gatgaaaatgacaaccctccgatattcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggtcctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaacggcacccctcctttgcagagtcaagcagcagtaattgtt
actgtgttggatgaaaatgacaacagtcccaaatttactcataatcatttccagtttttc
gtatcagagaacttaccaaagtatagcacggtgggggtgatcacagtgactgatgcagat
gctggggaaaataaagcagtgaccctttccatcctgaacgacaatgaaaactttgtgctg
gatccgtactctggagttataaagtccaacgtttcttttgatcgagaacagcagagctct
tacacctttgatgttaaggcagtggatggagggcaacctcctcgctcttctacagcaaaa
gtgacaataaacgtgatggatgttaatgataacagtcctgttgtcatctacccaccttct
aatacttcttttaagctagtgccactctcagcaattccaggatcggtggtagccgaagtc
tttgctgtggatatagacactggcatgaacgctgagctgaagtacacaattgtaagtggc
aataacaagggcttgtttcggattgacccagtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgacgtggggctgcaccgcttagtagtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtatttttatatgtaaatgatactgctggaaat
gcctcctatatttatgacctgatacgcaggactatggaaactcctttggatcggaacata
ggggacagtagccaaccctaccaaaatgaggactatctcacaatcatgatcgctattgtg
gcgggtgccatggttgtcatagtggtgatttttgtcacagttcttgttcgctgtcggcac
gcctccagattcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagctcc
cttttgaactttgttaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccatcaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccacgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtcccagcgccgtgttacttttcac
ctccccgatggctcccaggaaagctgcagtgacagtggtctgggagaccacgagccagtg
ggtggtggaaccctgatctcacaccctctccctctggttcagccgcaggacgaattctac
gaccaggcttcaccggacaagaggactgaagctgatggcaactctgaccccaattctgat
gggcctcttggtccacgaggattagctgaagctacagagatgtgtactcaagaatgcctg
gttttgggtcactcagacaactgttggatgcctcctagcttgggtccataccaacagcca
aagtctcctctctccacctttgcacctcagaaagaatgggttaagaaggacaaactagtt
aatggacacacgttgaccaggacctggaaagaagatagcaacagaaaccagttcagcgat
cgaaagcagtatggttccagtgagggccatttcaacactggcaaccacatgactgacatt
cctctggccaacttgaagtcttataaacaggccccaggatctgtggagagtccaaaggag
caccagctataa
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integrated database retrieval system
