Ficedula albicollis (collared flycatcher): 101815386
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Entry
101815386 CDS
T02815
Symbol
SCRIB
Name
(RefSeq) scribbled planar cell polarity protein
KO
K16175
protein scribble
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101815386 (SCRIB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_14
LRR_8
LRR_4
PDZ_2
LRR_13
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
101815386
NCBI-ProteinID:
XP_016151602
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All DBs
Position
2:complement(129532901..129669288)
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AA seq
1967 aa
AA seq
DB search
MRRGFCPKTDPVLSFLSQPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIP
EIPESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLGHLALNDVSLQSLPTDIGNLANLVT
LELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPE
LGNLRRLVCLDVSENRLEQLPEELSGLVALTDLLLSQNLLESIPDGIGQLKQLSILKVDQ
NRLTDMTESIGDCENLSELILTENMLTALPRSLGRLAKLTNLNADRNRLTALPAEIGGCA
SLSVLSLRDNRLALLPPELANTSELHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPM
LKFQTEDDEKTGEKVLTCYLLPQQPSPSLENLLQNSVDESWTDTNLNRVSVIQFLDEPKG
DDDEESGAERRGLQRRATPHPSELKVMKKVIEVRRNEVNAARADGNPGSPSSDEKRLSAT
SNRSEDSHLSSSTASAEPRPEDRERSWPNGQGPQLGRERKAREEEEEERKEAAEQEEEDV
EVEYNEPTVHFAEDTLIRSEDEEEDEERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAV
VALLQGLSSDGVPKEEEELGGCNNNPEPREQEEEWEEEERKNGALSAQPSVKGVSFDQAN
NLLIEPARIEEEECALMDRRFFPFRPVGFLEFQNLEFFWLLHQRQRLMQGWNSPESPKIQ
GLALNPPNPGAGSVPLSLWGALFGGFSPPGIFISRVSEEGPAARAGVRVGDKLLEVNGVP
LHRAEHQVAVEALRGSGSSVSMTVLRERMVEPENAITVTPLRPGDDYSPRERRGGLRFPG
GPEPPAPGRFSTCLLRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIAEGGAAHRDGILHV
GDRVISINGVDMTEARHDQAVALLTAASPTIVLLVEREGAAPGPGEPPPARLHSPPPGDR
DGDGDRDSQSPAEEPAAPPRSPPGMGLEEQYPIEEIHLVKAGGPLGLSIVGGSDHSSHPF
GIHEPGVFISKVIPRGLAARSGLRVGDRILEVNGTDLRQATHQEAVSALLSHGQELSVLL
RRDPAPPGMQEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDG
RLQVGMRILEVNHQSLLGMTHTEAVQVLRGVGDALLVQVCDGFDPRAAAAVEVSPGIIAN
PFAAGMGRKNSLESISSIDRELSPEELELLQKEMEMVREATQWEREEMQKVERLCRERAA
AAQQLEEEAESVPTEPLRLDYRTLAALPSSGLQRGNRAPADRPQPRRSMEGLCPVLSPPV
SPEPPAPPEGCPPCPEEPPEPLIDSQPIPFSQNPFVLANRRGRAGLGGPPLGYGRGGVLR
TSLHCKAPVGECGAGNARRESPYSPSTPQVPAAPRAPHLAGRETRFAAINFISSQDDSKS
TKPGVIQPLSRLRASAACPRAEQGDNSPNPFQQGNNSPNPFQQGNNPNPFQQHEPGLRIH
SSPKPRPPSPPSPDEVPVNVKQAYKTFAAVPQCQPLLGTQESSGQSSTXSLLCPLQVALS
PSTQHSPEQRSFRERQKYFEVEVKQQHLDKPPKRVSLVGEDDLKKMKEEEARKLQQQRAL
LLEEEAEEEEEEVRKVPEALQSSIIIEGVEYKVERLNGRSSQAAAARSLELSENSSSQRN
SLEDGIKSEHRTNSMSGLDPGPAPVRTAKAERRQQERLRVQSPELLPQDRDRDKELSPAE
RRALEAEKRAMWRAARSSALEDSVKQYEQDLARKLYQSRQRAPAPGARASPVQSHASRVP
AGSGGQSRMKSLEQDALKAQMVIAKSKEGKKRSTLEQLAESPSPAPTPSPTPLEDCSPRN
VTSPGRLSLSEKKFDYREFAAIPSSKPVYEIQSPDAADDLRFVADRSSSAPWEQDGQPEQ
EQEEALGGRDSTAAAAAAPPALEDVALFSSKRKLRHGRRSLETAVPT
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaggattttgccccaaaactgacccagttctgtcatttctgtcccagcctttc
ttcaggctgctgaacctgcgcaagctgggcctgagtgacaatgagatccagaggcttccc
cccgaggtggccaacttcatgcagctggtggagctggacatctcccgcaatgacattcca
gaaattcctgaaagcatcaaattctgcaagtccctggaaatcgcagacttcagtgggaat
cctctctccaggcttcctgagggcttcacccagctgagaagcctgggccacctggccctg
aacgatgtgtccctgcagagcctccccacggacattgggaatttggcaaacctggtgact
ttggagctgcgtgagaacctgctaaagactctccccacctccctctcattccttgtcaag
ctggagcagctggatctcggtggcaatgacctggaggtgctgccggacactctgggcgct
ctccccaacctgcgcgagctgtggctggaccggaaccagctctcggcgctgccgccggag
ctggggaacctgcgccgcctggtgtgcctggacgtgtcagagaacaggctggagcagctg
cccgaggagctcagcgggctggtggcactgacagacctgctgctgtcccagaacctgctg
gagagcatcccagatggcattggtcagctgaagcagctctccatcctcaaggtggaccag
aaccggctgacagacatgacagaatcgattggggactgtgagaacctgtctgagctcatc
ctgactgagaacatgctgacagccctgccccggtccctgggcaggctggccaagctgacc
aacctgaacgcggaccggaaccgtctgacggcgctgccggccgagatcgggggctgcgcc
agcctcagcgtcctgtccctgcgcgacaaccggctggccctgctgccccccgagctggcc
aacaccagcgagctgcacgtgctggacgtggctggcaacaggctgcagaacctgcccttt
gctttgacaaacctgaacctgaaagcgctgtggctggcagaaaaccagtcccagcccatg
ctgaagttccagaccgaggatgatgagaagacaggagagaaggttctcacctgctacctc
ctgccccagcagccctctcccagcctggagaaccttctgcagaacagcgtggatgagagc
tggacagacaccaacctgaacagagtcagcgtgatccagttcctggatgaacccaaggga
gatgatgacgaggagtctggagctgagagacgaggcctgcagcgccgagccacccctcac
cccagcgagctgaaggtgatgaagaaggtgatcgaggtgcggcgcaacgaggtgaacgct
gccagggctgatggcaaccccggctctcccagctcagatgagaagaggctgagtgccacg
tccaaccgcagcgaggactctcacctgtccagcagcacggcctctgccgagcccaggccc
gaggacagggagcggagctggcccaacgggcaggggccccagctgggcagggagaggaag
gccagagaggaggaggaggaggagcgcaaggaagctgctgagcaggaggaggaagatgtg
gaggtggaatacaatgagcccaccgtgcacttcgccgaggacacgctgatccgcagcgag
gatgaggaggaggacgaagagcgccccttccccgtggagaagcagaggctgatccgcaag
gacacgccccattacaagaaacacttcaagatcaccaaactgcccaagccagaggcagtg
gtggcccttctgcaggggctgagcagcgatggggtccccaaagaggaagaggagctggga
ggctgcaataacaaccccgagccccgggagcaggaggaagagtgggaggaggaggagaga
aagaacggagctctgtctgctcagccatccgtgaagggggtgtcgtttgatcaagccaat
aatctgctgattgaacctgctcgcattgaggaggaagagtgtgcactgatggacagaagg
ttcttccccttcaggccagttggatttctggaattccagaacttggaatttttctggctc
ttgcaccagagacagcggctgatgcaggggtggaacagccctgaatcccccaaaatccag
ggcctggccctgaatcccccaaatccaggggctggcagtgtcccattgtcactttggggt
gccctttttgggggtttctctccccctggcatcttcatttcccgagtgtccgaggagggt
cctgcagcccgagcaggggtcagagttggggacaaactgctggaggtgaacggggtgccc
ctgcaccgcgccgagcaccaggtggccgtggaggcgctgcggggctcgggcagctcggtg
tccatgacggtgctgcgggagcgcatggtggagcccgagaacgccatcaccgtcaccccg
ctgcggcccggggacgactacagcccgcgggagcggcgcggggggctgcgcttccccggc
ggccccgagcccccggccccggggcgattctccacctgcctgctgcgcaacgagaagggg
ctgggcttcagcatcgccggcggcaagggctccacgccctaccgggccggggacacgggg
atcttcatctccaggattgcagagggaggagctgcccaccgggacgggatcctgcacgtc
ggggacagagtcatctcaatcaatggggtagacatgacagaagccaggcatgaccaggcc
gtagcgctgcttaccgcggcctcgcccaccatcgtgctgctggtggagcgggagggagcc
gcgcccggcccgggggagccgccccccgcccgcctgcactcgcccccgcccggggacagg
gacggggacggggacagggacagccagagcccggccgaggagccagcagcgccgcccagg
agccccccgggcatggggctggaggagcagtaccccatcgaggaaattcacctggtgaaa
gcaggggggcccctggggctgagcatcgtgggaggcagtgaccattccagccatcccttt
gggatccatgagccaggagtcttcatctccaaggtgatcccccgggggctggctgcccgc
agcgggctccgtgttggggacaggatcctggaggtgaacggcactgacctgcgccaggcc
acgcaccaggaggctgtgagcgccctgctgagccacgggcaggagctgagcgtgctgctg
aggagggaccctgctcctcctggcatgcaggaaatctgcattgaaaaggctccaggagag
aagctgggcatcagcatcaggggtggagccaagggccatgctggcaatccctttgatccc
actgatgagggcatcttcatctccaaggtgagctcctcgggggcggcggcgcgggacggg
cggctgcaggtggggatgcggatcctggaggtgaaccaccagagcctgctgggcatgacg
cacacggaggccgtgcaggtgctgcggggcgtgggcgacgcgctgctggtgcaggtgtgc
gacggcttcgacccccgggcggcggctgccgtggaggtgtccccagggatcattgccaac
ccctttgctgctggcatggggcgcaagaacagcctggagagcatctcctccatcgaccgg
gagctgagccccgaggagctggagctgctgcagaaggagatggaaatggtgagagaagcc
actcagtgggagagagaagaaatgcagaaagtggagaggctgtgtagggagcgggcggcg
gccgcgcagcagctggaggaggaggcagagagcgtccccactgagcccctgcgcctggac
taccggaccctggcagcgctgcccagcagtgggctgcagagaggcaaccgagctcccgct
gatcgcccccagccccgccgctccatggagggtctctgccccgtgctgtcccccccggtg
tccccggagccccccgcgccccccgaggggtgtcccccgtgcccggaggagccgcccgag
cccttgatcgactcgcagcccatccccttcagccagaaccccttcgtgctggccaaccgc
cggggccgggcgggcctgggggggccgcccctgggctacggccgggggggcgtgctgcgg
accagcctgcactgcaaggctcccgtgggcgagtgtggggcaggaaatgcccggcgtgaa
tccccctattctcccagcaccccacaggtgcccgcagccccccgggcccctcacctggcc
ggcagggagactcgctttgctgccattaacttcatcagctctcaggatgacagtaaatca
accaagcctggtgtgatccagcccctgtcccgcctgcgagcgagtgcagcgtgtcccagg
gcagagcagggggacaacagccccaaccccttccagcagggcaacaacagccccaaccca
ttccagcagggcaacaaccccaacccattccagcagcacgagcccggcctcaggatccac
agctctccgaagcctcggccaccgtcaccgccctccccggacgaggtgcccgtcaacgtc
aaacaggcctacaagaccttcgcagcagtgccccagtgccagcccctgctgggcacacag
gaatcgtctgggcagagcagcacagngtcactgctctgtcccctgcaggtcgccctcagc
cccagcacccagcacagccctgagcagaggtccttccgtgagaggcagaagtatttcgag
gtggaggtgaagcagcagcacctggacaaacctcccaagcgcgtgtccctggtgggggag
gatgacctgaagaagatgaaggaggaggaagcccgaaagctgcagcagcagcgagccctg
ctgctggaggaggaggctgaggaggaggaggaggaggtgaggaaggtgcccgaggctctg
cagtccagcatcatcatcgagggcgtggagtacaaggtggagaggctgaatggaaggagc
agccaggctgcagcagctcggtccctggagctcagtgagaacagcagctcgcagaggaat
tccctggaggacgggatcaagtctgagcacagaaccaactccatgtcagggctcgacccc
ggcccggccccggtgcgcacggccaaggctgagcggcggcagcaggagcggctgcgcgtg
cagagccccgagctgctgccccaggacagggacagggacaaggagctgtccccagccgag
cgccgggccctggaggcggagaaacgagccatgtggagggcagcacgatcctcagctctt
gaagacagtgttaaacagtacgagcaggatctggccaggaagctgtaccagtcccggcag
cgggctcctgctcccggggccagggctagtccggtgcagagccacgcctccagagtgcca
gcagggtcaggaggccaatccaggatgaagtcactggagcaggacgctctcaaggcccag
atggtcattgccaagtccaaggaggggaagaagcgcagcacgctggagcagctggcagag
tcaccctcacctgcgcccacgccgtccccaacaccgctggaagattgcagccccaggaac
gtcacttccccaggaaggctgtcactgtctgaaaagaagtttgactaccgggaatttgct
gctattccttcctccaaacctgtttacgaaatccagtcccctgatgcagctgatgacctc
agattcgtggctgacaggagcagctcagctccctgggagcaggacgggcaacccgagcag
gagcaggaggaggccctgggaggccgggactcaacagcagcagcagcagcagctccccca
gccctggaggacgtggccctgttcagcagcaagcgcaagctccggcacggccggcgcagc
ctggagaccgctgtccccacatag
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