KEGG   Ficedula albicollis (collared flycatcher): 101815411
Entry
101815411         CDS       T02815                                 
Symbol
RIF1
Name
(RefSeq) replication timing regulatory factor 1
  KO
K11138  telomere-associated protein RIF1
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fab03032]
    101815411 (RIF1)
DNA replication proteins [BR:fab03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    101815411 (RIF1)
SSDB
Motif
Pfam: Rif1_N Polysacc_syn_2C
Other DBs
NCBI-GeneID: 101815411
NCBI-ProteinID: XP_016155158
LinkDB
Position
7:37561083..37590056
AA seq 2303 aa
MRESLFQQSGSGTQQARHGLRAAGAAGAVGRRPQGRPGRHCGAAGHGRRLLFRYSLTRRL
RAGGGSDRAPSAPRSRFTGEGGKAFIADVKKHFPQLCKVFKAHISSPNLELSNAALQALG
FCTFNSNNTAELSATETQELLAAVNSVAVKCSDKNTRTRALWVISKQAFPPEVVKKEVSN
ILCTLETILTKGEVQSVVVEYEALNVIIRLVEQTPDQMGEEAVRWAKLIIPLVVHSAHKV
QLRGATALEMGMPLLLQKQQEVAAVTEHLMTTKLISELQKLFSAKNETFVLKLWPLFVRL
LGKTLHRSGSFINSLLQLEELGFRSSSPVVKKIAFIAWKSLIDNFALNPDILCSAKRLKL
LMQPLSSIHVRTEALALTKLEVWWYLLMRLGPHLPSNFEQVCVPLIQSTLSVDPAAAAFP
GTPSRPNNPSLGSATPGQKSGPFPFVSPGTPRMALNSSTAAVVQFPSIQLLGIEMLLHFL
MGPQVVDFAKQNKLVLSLEPLQYPLISSPSFFCKHASTLINAVQDGFVAIGKEVPDCLLN
VIWKDINGFVKTAIEAGNKKEKQGSEILTMLLQALKNTVRSNSLPVQKMLSLIDITVKEL
PPKVLGSPAYQVADMDLLNGTPALFLIQLPFHNNLLECCVTDERFFGILETLVGFALSGP
TSALAFSESVLCVIDQSAQQVGNKEHLWRMWSIVVNPLTEWINQNNEVNQGDALEHNFSA
VYSALLLPVSHIFPTQGFPQPTLKSLLRSWSDLYRAFARCAALVATAEENLCCEELCAKI
ISGLEGETPVVFSMLEGLTHLVSVMVDCINFAPYGTKFQPKTRSPQTPTDWAKKKKEPLG
KLSSLFKLLLLLLNSFHELSCREVHSEPLTAVGPSLLAALHSIISHISLPSLLGTTLAFF
SKPLAVFYEKNKLPEVPKVYSNLNTKLEKLLAEMLQCLQCHCPGSCDSELLQQLSPVLCL
AFQHRSKQLRQQSAQLWNCTFAKASSLTYPEELKSVLSQAKKKIPLLLPGFESIEMSEEC
SGPFSDMMENSQLDAKISGMEVKVGQKRDSILAQTSEPKNDGKDKSSNVQATPAKLKLEF
SSPKTTSETLLEEEKSVDFVFIPPETKPRILTEHQKEVLRSKRADIPAMYNTLDASQDTS
SFSQYTQSQEDSLEVPPLVENAKEEPANQPQEEEAGSEGCHSEESPACSGEGEAKNETAE
MIPEESSIGEGLETSSVEAASQEASAEKEDTSNVTSSSASSDIISGTPQPVSRRQSFITL
EKFGAAESRAFSPAPLSSVLELPGSAPEAATQENSSGSKASAKAERSGEENKNVPKCEAG
ATRRVTRQQSRMELQGHKAKLQGRPEESLASDSLEGSAELGSAVEGVEHVLLSQAQTLPP
SEPDIQKMEDAAPKMEKVQELDMDSKENTPPESSSCSEQAPGDDSQVPAASPQQKQLRRS
SRRRPETLESSGSQEKEDGLPKRDRRKEEEKAGQKKLSQGKGDGSQKQKGIAGKTTQSTK
ESSQAERVAEDWSCKDSAACRGLEEEGSRGGRRAEDSPRPEGEAQGSLSTAGQKVERPRY
HTRRSSQGLLSSIENSEADSSDSKEESTKKRKTIKVRSRSSSLEGKLKEEQAGSQSLEGS
PQGNGAKSPVEANKGDPEVSTGAAVPAEPGGLESQEIPAAAGEAVGSGSSENSGALQDTS
VEQNNGDASMESLSSPCVSEQDGRAAEESKQEEKQSSPGDCAPAANASAAEPSSLQSHEC
QSKRSKRVKKIKSCDCCFKKPKLQVTETKLTEPKKEKAPELEEPESSPVQTPGNVSGHSD
LEESLALAPCGMSTPKEPSSFSLESQGVALENMEGSSVVVEEENPENPEGSAAETTESTE
EIKEPAEEKEQTEQVLPESVPAEPRESCLDSGDQGEEPAAAEKEEITENRQVEEVPEELS
VDSKPEEKEMKEPEGNQEDKGEAESSAGETCVVPDQEMKDELMEAEIKVPENVALANTSV
DSPLKVEGDPQVQVTESPTSLQARCTWSPSASPSTSILKRGVKRSQEDDSLSPANKIRRV
SFANPIFQEGLADDIDRRSPVIRSHSSPSSRSLKILSNMQHITTPTKGFLSPGSRTLKFK
SSKKCLITEMAKESLPCLTEFVYPALAGCKAPVDVILPQITSNICARGLGQLIRAKNIKT
VGDLSTLTALEIKTLPIRSPKVSNVKRALKGYHEQQVKSRAVEESSVLEDAEKPGNDVEE
KPLCGEEEKLAADLVEAPTSSEQPPVDLLGQIQALAAQLSSADLHGYSGRQLFEMQEQLA
GMASCILRNLQARWSSPPHQGPE
NT seq 6912 nt   +upstreamnt  +downstreamnt
atgagggaaagcctcttccagcagagcggctctggcactcagcaggctcgccacggcctg
agggcagccggagctgccggagcggtcggacgccgcccccaggggcgcccaggccggcac
tgtggcgcagccggacatggacggcgcctccttttccgctattccctgacccggcgtttg
cgggccgggggcggctcggaccgtgcgccctcagcgccgcgcagtcgcttcactggtgaa
ggaggcaaagcgttcattgcagatgtcaagaaacacttccctcaactctgcaaggtgttc
aaggcacacatttccagtccaaacttggagctcagtaatgcagcattgcaggccttggga
ttttgcacttttaattcaaataacacagctgaattatctgccactgaaacccaggagctg
ctggcagcagtgaacagcgtggctgtgaaatgctcagacaaaaacacccgcactcgggca
ctttgggtcatctctaagcaggcttttcccccagaggttgttaaaaaggaggtgtccaat
attctctgtaccctggaaacaatcctgactaaaggagaagttcagtctgttgtggttgaa
tatgaggcacttaatgtcattattcgcttagtggagcaaactccagaccagatgggagaa
gaggctgtgaggtgggcaaagctgatcatccctctggttgtccactcagctcacaaagtg
cagttaagaggtgccactgccctggagatggggatgccactgctcctgcagaagcagcag
gaggtggcagctgtcactgagcacctgatgaccacaaaattaatttccgaacttcagaaa
ttgttctctgccaaaaacgagaccttcgtgttaaagctgtggcccctgtttgtcagactg
cttggaaagaccctgcatcgcagtggcagcttcatcaattccctgctgcagctggaggag
ctgggattccgcagcagctccccagtggtgaagaaaattgccttcattgcatggaagagc
ctcattgataattttgccctaaatccagacattctgtgcagtgctaaaaggctgaaactg
ctgatgcagcccctgagctccatccatgtgaggacagaggctctggcactcaccaagctg
gaggtgtggtggtatttactgatgagactgggccctcacctgccctccaactttgaacag
gtttgtgtcccattaatccagagcaccctgagtgtggatcctgctgctgctgcgttccca
ggaactccctcacgccccaacaaccccagcctgggctcagcaacccctgggcagaaatca
ggtcctttcccgtttgtgagcccaggcacgcccaggatggccctgaacagcagcacagca
gcagtggtgcagttcccttccatccagctcctggggattgaaatgctgctccacttcctc
atgggaccacaagttgtggattttgcaaagcagaacaaactggtgcttagtttagagcct
ctccagtacccactgatcagtagcccttcttttttttgtaagcatgccagcactctgata
aatgctgttcaggatggctttgttgcaattggaaaagaagttcctgattgtttgctgaat
gtcatctggaaggacataaatggatttgtaaaaacagcaattgaagcaggaaataagaaa
gaaaagcaaggctcagaaatactgaccatgttactccaggccttaaaaaacactgtgaga
tcaaattctctgcctgtgcagaaaatgctgtctctcattgatatcactgtcaaggagtta
cctccaaaagtattgggatccccagcttatcaggttgctgatatggatcttttaaatgga
accccagctttgttcctcatccagctgcctttccacaataatctcttggaatgctgtgtg
acagatgagagattctttgggattttggaaactctggtgggttttgccctgtctggcccc
acctctgccctggctttcagtgagtctgtgctctgtgtcattgatcagagtgcacagcag
gtgggcaacaaggagcacctctggagaatgtggagtattgttgttaatcctctgactgag
tggattaatcagaacaacgaggtgaaccagggggatgccctggagcacaacttcagtgct
gtgtacagtgctttgctgctgccagtatcccacattttccccactcagggattcccacag
ccaactttgaaatccttgctgcgctcttggtcagacctgtaccgagcttttgctcgttgt
gctgctctggttgcaacagcagaagaaaacctgtgctgtgaagaactctgtgccaaaata
atatctgggctagaaggtgaaactccagtagtgttttccatgctggaaggtctcacccac
cttgtgtcagtcatggttgactgcatcaactttgccccctatgggactaaattccagccc
aaaactagatctccccagacacccacggactgggctaagaagaagaaggagccccttggc
aaactcagctctctgttcaagctgctgctgctgctgctgaactccttccatgagctcagc
tgcagggaggtgcactcagaacccctgactgccgtgggcccctccctgctggctgccctg
cactccatcatcagccacatctcgctgccttcgctccttggcaccactctggcctttttc
tccaagcccttggcagtgttctatgaaaaaaacaagctccctgaggtacccaaagtctac
agcaatctgaacaccaagctggagaagctgctggcagagatgctgcagtgcctgcagtgt
cactgccctggctcctgtgactctgagctgctgcagcagctcagccccgtgctgtgcctg
gccttccagcacaggagcaagcagctgcgccagcagagtgcccagctctggaactgcacc
tttgccaaggcctcctctctcacctaccctgaggaactcaagtctgtgttaagccaagcc
aaaaagaaaatccctttgctgctgcctggttttgaaagcattgagatgtctgaggagtgc
agtggccccttctctgacatgatggaaaattcccagctggatgcaaagatcagtggaatg
gaggtgaaggtgggacagaaacgagattcaatattggcacagacaagtgaaccaaaaaat
gatggcaaagacaagtccagcaacgtgcaggcaacacctgccaagttaaaactagaattt
tcatctcctaagacaacaagtgagacacttctagaagaggagaaatctgttgattttgtg
tttattcctccagaaacaaaaccaagaatattgacagaacatcagaaagaagtgcttagg
tcaaagagggctgatattcctgccatgtacaacaccttggatgcctcccaggacaccagc
tcgttttcccagtacacccagagccaggaggattctttggaggtgccacctttagtggaa
aatgccaaggaagagcctgcaaaccaacctcaggaggaagaggcggggagtgaaggatgt
cactcagaggagagcccagcctgcagcggcgagggggaggccaaaaatgagacagctgag
atgatcccagaggaatcatccattggagagggattggagacgagttctgtggaagcagct
tcccaggaggcctcagcagagaaggaggacacctcaaatgtcaccagcagctcagcctcc
agtgacatcatctctggcaccccccagcccgtcagccggcgccagtccttcatcaccctg
gagaaattcggggctgcagagagcagagccttcagcccagcccctctgagctctgtgttg
gagctgcctgggagtgctcctgaggcagccacccaggaaaacagcagtggcagcaaggcc
agtgctaaagcagagaggtctggagaggaaaataaaaacgttccgaagtgcgaggccggg
gcgacgcgcagggtgacgcggcagcagagcaggatggagctgcagggccacaaagccaag
ctccagggcaggccagaggagtccctggcctctgacagcctggagggcagtgctgagctg
ggctctgcagtggagggtgtggagcatgtcctgctgagccaggcccagactctgccccct
tcagagccagacatccagaaaatggaggatgcagccccaaaaatggaaaaggtgcaggag
ctggacatggattcaaaagaaaacacccccccagagagcagcagctgctctgagcaggcc
ccaggggatgacagccaggtgccagcagcgtccccccagcagaaacagctccggcgttcc
tccaggagacgccctgagactctggagagctcaggcagccaggagaaagaggacgggctc
ccaaagagagacaggaggaaagaggaggagaaagctgggcagaagaagctgtcccagggg
aaaggagatggatcccaaaagcagaaaggaattgctgggaaaacaacacaaagcacgaaa
gagagcagccaagctgagagagtggcagaggactggagctgcaaggactctgctgcctgc
aggggcctggaggaggaggggagcagggggggcaggagggcagaggattcccccaggccc
gagggggaggctcagggcagcctcagcactgcagggcagaaggtggagcgccctcgctac
cacaccaggagatcctcccaaggtttgctgtccagcatagagaactctgaggctgacagc
tctgacagcaaggaggagagcacaaagaagaggaaaaccataaaagtgaggagtagaagc
agttctcttgaaggaaaattgaaagaggaacaggcagggagccagagccttgagggatct
ccccagggaaatggagctaagagtccagtggaggcaaataaaggtgatcctgaggtgagc
acgggtgctgcagtgccagctgagccaggtggcctggaaagccaggaaatccctgcagct
gctggagaagctgtggggtctggcagctctgagaattcaggtgctctgcaggacaccagc
gtggagcagaacaatggtgatgcttccatggagtccctgagcagcccctgcgtgtctgag
caggatgggagagcagcagaggagagcaaacaggaggagaagcagagcagcccaggggac
tgtgcaccagcagccaatgcttcagctgctgagccctcctctttgcaaagccatgagtgt
cagagcaagagaagtaaaagggtgaagaaaatcaagagctgtgattgctgcttcaaaaag
ccaaagctgcaggtgactgaaacaaagctcactgagccaaagaaggagaaagctcctgag
ctggaggagcctgagagcagcccagtccagacacctgggaatgtttctggtcactcagat
ctggaggagagcttggccctggctccctgtgggatgagcactcccaaggaacccagcagc
ttcagcttggaaagccagggagtggctctggaaaacatggaggggagcagtgtggtggtg
gaggaggagaatccagagaatccagagggttcagctgctgaaaccaccgagtccacggag
gaaataaaggaacctgctgaggagaaggagcaaacagaacaggttctgcctgagagtgtt
cctgcagagcccagggagagctgcctggactcaggggaccaaggggaagaaccagcagct
gcagaaaaggaagaaataactgaaaatagacaagtggaagaggtgcctgaggagctgagt
gttgacagcaaacctgaggaaaaagagatgaaggagccagaaggaaatcaggaggataaa
ggagaagctgagagctctgctggagaaacttgtgttgttccagatcaagagatgaaggat
gaattgatggaagctgaaataaaagtgcctgaaaatgtggccttggcaaacacgagtgtg
gattcccctctgaaggtggaaggggatccccaagtgcaggtgactgaaagccccaccagc
ctccaggcccgctgcacctggtccccctcagcctccccctccaccagcatcctgaagaga
ggggtcaaaaggagccaggaggatgattccctgtcacctgccaacaagatccgtcgagtc
tcttttgcaaatcccatttttcaggagggcctggctgacgacatcgacaggaggagtcct
gtcatcagatcccattcctcaccctcttccagaagtcttaaaatcctctctaacatgcag
cacattaccactccaaccaaaggatttctgtccccaggatctcgtacccttaaatttaag
agctcaaagaagtgtttaatcacagaaatggccaaggaatctctgccgtgccttacagag
tttgtgtatcctgccttggctggctgcaaggcccctgtggatgtcattttacctcagatc
acatccaacatctgtgccaggggcctggggcagctcatccgagccaagaacatcaagact
gtgggagacctgagcactctgacagctctggaaatcaaaactctgcccatccgctccccc
aaagtctccaatgtcaaaagagctctgaaaggataccatgagcaacaggtaaaatctcga
gcagtggaggaaagctcagtgcttgaagatgctgaaaagcctgggaatgacgtggaggag
aaacctctttgtggagaagaggaaaaacttgcagcagatctggtggaagcccccacaagc
agcgagcagccccctgtggatctcctggggcagatccaggctctggctgcccagctgagc
tcagcagatctgcatggctactctggcaggcagctctttgagatgcaggagcagctggca
gggatggcctcgtgcatcctgaggaacctgcaggctcgctggagctcccctccccaccag
ggccccgagtag

DBGET integrated database retrieval system