Ficedula albicollis (collared flycatcher): 101815489
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Entry
101815489 CDS
T02815
Symbol
CASZ1
Name
(RefSeq) castor zinc finger 1
KO
K25209
zinc finger protein castor
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101815489 (CASZ1)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101815489 (CASZ1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_CASZ1
zf-C2H2_CASZ1_1
Phage_YorO
Motif
Other DBs
NCBI-GeneID:
101815489
NCBI-ProteinID:
XP_016158895
LinkDB
All DBs
Position
21:complement(7746539..7838091)
Genome browser
AA seq
1878 aa
AA seq
DB search
MKVDYLSEFGFRLSDYAERTLCTDAASGKPAMAAKRKGGLKLNAICAKLSRQVVCDHAGA
EQARADRGQQDSSNKELPQPGAKEPGTEFADGLSRVQKIEEDKRREVIEKWVNGEYNEEP
LLGRAEGREGKGAESAELPPEGVYMVQPKGCSDEEDNGDEADALRGSQDGSFLDDRDSDG
PAKDDAYRSSSGEPGSKLGAGATSGEASSLRDYAATTMNEFLGMFGYDEQNMRDELARKI
SFDKLHAAPAEAAALPGDDAAGKRARFSKYEEYIRKLKAGEQLSWPVHLAKAEELGSKLG
KEPCSALAQPGRGPGPDASMLTETKATILPLPSPGSSQMQGLMSRASKYDFFIQKLKTGE
SIRPQNGNTYKKASKYDLENVKYLHLFKPGEGSPDMGGAIAFKTGKVGRPSKYDVRNIQK
LTPVKAVPSLAPASLASTPSSTPVAGPEQSISLPFNTPEYLKSTFSKTDSITTGTVSTVK
NGLPTDKPAVSEDVNIYQKYIARFSGSQHCGHIHCAYQYREHYHCLDPECNYQRFTSKQD
VIRHYNMHKKRDNSLQHGFMRFSPLDDCSVYYHGCHLNGKSTHYHCMQVGCNKVYTSTSD
VMTHENFHKKNTQLINDGFQRFRATEDCGTVECQFYGQKTTHFHCRRPGCTFTFKNKCDI
EKHKSYHIKDDAYAKDGFKKFYKYEECKYEGCVYSKATNHFHCIRAGCGFTFTSTSQMTS
HKRKHERRHIRSSGVLGLPTSLLGSKDNEQEESSNDDLIDFSAMSSKNSSLSASPTSQQS
SVSLIVPAAPSSAAELASSQATKSANSLTPATKISGLLSQALPSNIPLALALSNSALPGA
AGSFFPIIPSRVSTPLPASSANLMAAGSGSNAASSAPADSSSQPVSGSGEPVATSSTSSP
APAASIMERISASKGLISPMMARLAAAALKPSVALEAGNGQPAPPGRFNPVQVKQEPAEA
MGPSSATSQDPLQEQSLDLSVKDHGNESNGHTVSANSSLLSSLMNKMSKTSASLGNLLSI
KTEAEGSQAGAGEPSQYLGKAVKALVQEKLSEPWKMYLRRFGTKDFCDAQCDFLHKVHFH
CVVEECGALFSTLDGAIKHANFHFRTEGGTVKSNSESPFSTATESKASLAPSSPSAAPAT
MASAPALDVPTPNPAALPSAPTLLAWKQLASTIPQMPQIPASVPNLAASPLATTSLENAK
PQVKPGFLQFQENDPCLATDCKYANKFHFHCLFGNCKYVCKTSGKAESHCLDHINPNNNL
VNVRDQFAYYSLQCLCPNQHCEFRMRGHYHCLRPGCYFVTNITTKLPWHVKKHEKAERRA
ANGFKYFTKREECGRLGCKYNQVNSHFHCIREGCQFSFLLKHQMTSHARKHMRRMLGKNF
DRVPTQVIGHTPRNENLPQVGSMAPSPASSGTPASFQGAPSMMDTETEEYMDYTGCSPGG
ISSESSNMDRSCSSTPVGNESTSAGNTITMPTASGAKKRFWIIEDMSPFGKRRKTASSRK
MLDEGMMLEGFRRYDLYEDCKDSSCQFSLKVTHYHCTRENCGYKFCGRTHMYKHAQHHDR
VDNLVLDDFKRFKSSLSCNFPDCQFSGNSTHFHCLRCGFRCTDSTKVTAHRKHHGKQDVI
SAAGFCQFSSSVDCEVPDCKYKLKCSHFHCTYPGCKHTVVGMSQMDSHKRKHEKQERGEL
PAISPGPEGLAHPALEYDIQNSSISLDSSLNLSADTSSSLLFLQNAAGVGLGDSLDLSRK
AAEGGERPAPGAAGEDGPAGTAGPTGEDEEDSSQEDEEDDEEEMNEEEEDDEEEDDDDDD
EEDEEEEDLNTDSEESLPDPEGLAAKEDGEPEEGASSTDRGDASRPQGEPALAAAPAPAP
APAPAAASASTAAPAASP
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgattatttaagtgaattcggctttcgtctctccgactatgctgaaagaact
ctatgcactgacgcagcctcaggaaaacccgcgatggctgccaagcgcaaaggcggcctg
aagctgaacgccatctgcgccaagctgagccgccaggtcgtctgcgaccacgcgggcgcc
gagcaggcacgggcggacaggggacagcaggacagcagcaacaaggagctgccccagccc
ggcgccaaggagccgggcacagagtttgcagatggactcagccgcgtgcagaagatcgag
gaggacaaaaggagggaggtgatcgagaagtgggtgaacggggagtacaacgaggagccg
ctgctggggcgagcagagggcagagagggcaagggcgccgagagcgcggagctgcccccc
gagggggtgtacatggtgcagcccaagggctgcagcgacgaggaggacaacggcgacgag
gcggacgctctgaggggctcgcaggacggcagcttcttggatgacagggattcagatggg
ccagccaaggacgatgcctaccggtcctccagcggcgagccgggctccaagctgggggca
ggagccacctcaggggaagcgtcctcgctgcgggactacgccgccaccaccatgaacgag
ttcctgggcatgttcggctacgacgagcagaacatgcgggacgagctggcgcgcaagatc
agcttcgacaagctgcacgccgcgcccgcggaggccgcggccctgcccggcgacgacgcc
gcgggcaagcgcgcccgcttctccaagtacgaggagtacatccgcaagctgaaggccggc
gagcagctctcgtggcccgtgcacctggccaaggcggaggagctgggctccaagctgggc
aaggagccgtgctcggcgctggcccagcccgggcgcgggccgggccccgacgcctccatg
ctgaccgagaccaaagccaccatcctgcccctgccctcccccggcagctcccagatgcag
ggcctcatgtcacgggcctccaagtacgacttcttcattcagaagctgaagacgggcgag
agcatcaggccgcaaaacggcaacacctacaagaaggcctccaagtacgacctcgaaaac
gtcaagtacttgcacctcttcaagcccggggagggaagcccagacatgggaggagccatc
gccttcaagacgggcaaggttggccggccctccaagtacgacgtgaggaacatccagaag
ctcactccagtgaaagctgtgcccagcctggcccccgcctccctcgccagcacccccagc
agcactcccgtggccgggccagagcagtccatctcattgccattcaacactcctgagtac
ctgaaatcaactttctccaagacagactccatcacaactggaacagtctctacagtaaag
aatggattacccactgacaaaccagccgtcagcgaagacgtaaatatttaccagaagtac
attgccaggttctctggcagccagcactgtggccacatccactgtgcctaccagtaccga
gagcactaccactgcctggaccccgagtgcaactaccagaggttcaccagtaaacaggac
gtgatccggcactacaacatgcacaagaagcgggacaactccctgcagcacggcttcatg
cgcttcagccccctggacgactgcagcgtctactaccacggctgccacctcaacggcaag
agcacccactaccactgcatgcaggtgggttgtaataaggtctacacaagcacctctgat
gtgatgacccatgagaacttccacaagaagaacacgcagctcatcaacgacgggttccag
cggttccgtgccactgaggactgcggcactgtggaatgccagttctacgggcagaaaacc
actcacttccactgcaggagacctgggtgcacattcaccttcaagaacaagtgtgacatt
gagaagcacaagagctaccacatcaaagatgatgcctatgccaaggatggcttcaagaag
ttctacaagtacgaggaatgcaagtacgagggctgtgtctacagcaaggccaccaaccac
ttccactgcatcagggcaggctgtggcttcaccttcacctccaccagccagatgacttcc
cacaagcgcaagcacgagcgccggcacatccgcagctcgggggtgctggggctgcccacc
tcgctcctgggctccaaggacaacgagcaggaggagtccagtaacgatgacctcattgac
ttctctgccatgagctccaagaactccagcctgagtgcctccccgaccagtcagcagtct
tccgtttctctcatcgtcccagctgcgccctcctctgcagctgagcttgcttcctcacag
gccaccaagtctgccaacagcctgacaccagccacaaagatctctggcctgctttcccag
gcccttcccagcaatatacccttggccctggcactctccaactcagcacttcctggagca
gctggatccttcttccccatcatccccagccgggtctctacaccccttcctgccagctcg
gctaatctgatggctgctggttctggcagcaatgcagcatcatctgctcctgcagattcc
tcatcccagccagtttcaggatctggtgagccagtggctacttcttcgacttcttcaccc
gctccagcagcctctataatggaaaggatctctgctagtaagggattaatctctcctatg
atggccaggctggcagcagctgcactcaagccctctgtggcacttgaagcagggaatgga
caaccagcacctcctggacggttcaatccagtccaggtgaagcaggaacctgcagaggcc
atgggaccctcatctgccaccagccaggaccccttgcaggagcagagtttggacctgagt
gtcaaggaccatggtaatgaatcaaatggccacacagtctcggcaaattcatctctttta
tcctcgcttatgaataagatgtccaagaccagtgccagtcttggcaacctgctgagcatt
aagacagaagctgaaggcagccaggctggggctggggagccaagtcagtacctgggcaag
gcagtgaaggccctggtgcaggagaagctctctgagccatggaagatgtacctgcgccgg
tttggcaccaaggatttctgtgatgcccagtgtgactttctgcacaaggtgcatttccac
tgtgtggtggaggagtgtggggccctcttcagcaccctggatggagccatcaagcacgcc
aattttcacttccgaactgaaggtggaactgtgaaaagcaactctgagtctcccttctcg
actgctactgagagtaaggcttccctggccccttcatcaccatctgctgctcctgccacc
atggccagtgctcctgccctggacgtgcccactccaaacccagctgctctgccctctgct
cccacactacttgcttggaagcagctggcttcaaccataccccagatgcctcagatccca
gcatcagtgcctaacctggcagcttcaccgttggcaacgacttccctggagaatgccaag
cctcaggtcaaacctggatttctccagttccaggagaatgatccctgcttggcaacagac
tgcaagtacgccaacaaattccacttccactgtctctttgggaactgcaagtatgtgtgc
aaaacctctggcaaagcagaatcccactgcctggaccacatcaaccccaacaataacctg
gtgaatgtgcgagaccagtttgcttactactccctgcagtgtctctgtccaaaccagcac
tgcgagttccggatgcggggccattaccactgcctgcggcccggctgctacttcgtcacc
aacatcaccaccaagctgccctggcacgtgaagaagcacgagaaggcagagaggagggca
gccaacggcttcaagtacttcaccaagcgggaggaatgtggcagactgggttgcaaatac
aaccaggtgaacagccacttccactgcatccgagagggctgccagttctccttcctgctc
aagcaccagatgacatcccatgccaggaagcacatgaggaggatgctggggaagaacttt
gatcgtgttcctactcaggttattggccacactccaagaaatgaaaatctcccccaggtt
ggcagcatggcacccagcccagcctcatcaggaaccccagcttcctttcagggagccccc
agcatgatggacactgaaacagaggagtacatggattacactggctgcagccctgggggc
atctcctctgaatcctccaacatggaccgcagctgctccagcacccccgtgggcaatgaa
agcacctcagcagggaacaccatcaccatgccaacagcctcgggggccaagaagcgtttc
tggattatcgaggacatgtccccgtttggcaagcgccgcaagaccgcgtcctcgcgcaag
atgctggacgaggggatgatgctggaggggttccggcgctacgacctctacgaggactgc
aaggactcgagctgccagttctctctcaaggttacccactaccactgcacacgggagaac
tgcggctacaagttctgcggccgtacccacatgtacaagcacgcccagcaccacgaccgc
gtcgacaacctggtgttggatgatttcaagcgcttcaagtcttcgctgagctgcaacttc
ccagactgtcagttctctggcaatagcacgcacttccactgcctgcgctgcggcttccgc
tgcaccgacagcaccaaggtgacggcgcaccgcaagcaccacggcaagcaggacgtgatc
agcgccgccggcttctgccagttcagctccagcgtggactgcgaggtgcccgactgcaag
tacaagctcaagtgctcccacttccactgcacgtaccccggctgcaagcacacggtggtg
gggatgtcgcagatggactctcacaagcgcaagcacgagaagcaggagcgcggggagctg
cccgccatctcccccggccccgagggcctcgcccaccccgccctcgagtacgacatccag
aactcttccatcagcctggacagttccctgaacctgagcgccgacaccagcagctcgctg
ctgttcctgcagaacgcggcgggcgtggggctgggcgactcgctggacctgagcaggaag
gcggccgagggcggcgagcgcccggcgcccggcgcggccggggaggacgggcccgcgggg
acagccggccccacgggcgaggacgaggaggactcctcccaggaggatgaggaggacgac
gaggaggagatgaatgaagaggaggaggatgacgaggaggaggatgacgatgatgatgat
gaggaggatgaggaggaggaagacctgaacacagattctgaagaatcgctgccagaccct
gaaggcctggccgccaaagaagatggagaaccagaggagggggcttcttccacagaccgt
ggcgatgcttccaggccgcagggcgagccagccctcgcggcagcccctgcccctgcccct
gctcctgctcccgctgctgcctcagcctccaccgctgccccagcagcttctccttaa
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integrated database retrieval system
