Ficedula albicollis (collared flycatcher): 101815528
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Entry
101815528 CDS
T02815
Symbol
NFKB1
Name
(RefSeq) nuclear factor kappa B subunit 1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04010
MAPK signaling pathway
fab04210
Apoptosis
fab04218
Cellular senescence
fab04620
Toll-like receptor signaling pathway
fab04621
NOD-like receptor signaling pathway
fab04622
RIG-I-like receptor signaling pathway
fab04623
Cytosolic DNA-sensing pathway
fab04625
C-type lectin receptor signaling pathway
fab04920
Adipocytokine signaling pathway
fab05132
Salmonella infection
fab05164
Influenza A
fab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101815528 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
101815528 (NFKB1)
04218 Cellular senescence
101815528 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
101815528 (NFKB1)
04621 NOD-like receptor signaling pathway
101815528 (NFKB1)
04622 RIG-I-like receptor signaling pathway
101815528 (NFKB1)
04623 Cytosolic DNA-sensing pathway
101815528 (NFKB1)
04625 C-type lectin receptor signaling pathway
101815528 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
101815528 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101815528 (NFKB1)
05168 Herpes simplex virus 1 infection
101815528 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
101815528 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101815528 (NFKB1)
Transcription factors [BR:
fab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
101815528 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
101815528
NCBI-ProteinID:
XP_005044950
UniProt:
U3K0E6
LinkDB
All DBs
Position
4:22585317..22646256
Genome browser
AA seq
982 aa
AA seq
DB search
MAAEDSYIMGVSDPQMFAVDQFMGMNALFNSTNYITSEIPLRTADGPYLQIIEQPKQRGF
RFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVG
KFCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPEL
SYLQAEGCGDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVI
SDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWE
GFGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKD
KEEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGSAGSGFSFPSYGYSAFGGMQFHPG
TTKSNAGMKHEGLSNCMAEQDRKSCDKQSDEWDMKCDVKVETVERTECRTSAVNEKKEDS
GFSCKTEVSEADCRWQDALFLEKAMQLARRHCNALFDYAVTGDVKMLLAAQRHLTAVQDD
NGDNVLHLAIIHLHTELVKNLLEVMPDLNYNDIINMRNDLYQTPLHLAVITKQAKVVEEL
LKAGADVSLLDRHGNSVLHLAATEGDDKILSLLLRHEKVSPMVNFPNGEGLSAIHMVVMA
NSMSCLKHLIAAGVNINAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTT
PLHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDGEDDDEGIVPGTTPLDMAAN
SEVYDILNGKPYESAEVLEDLLTQGHLRELNENSKMQLYKLLELPDPTKNWSTLAQKLGL
GILNNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQMDHREAIEIIQEALSISHRSSPL
EESTAKALPSSSPLTFARDTGELDNSRFQDTESTCDSGVETSFRKLSFTYSDSLNSKSSL
TLSKMALGYGHESSGQSNYIAD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaagattcctatatcatgggagtatctgatccccagatgtttgcagtggat
cagttcatgggaatgaatgctttatttaacagtacaaattacatcacttcagaaatacca
ctacgaacagcagatggaccatatcttcagatcatagaacagccaaaacagaggggattt
cgtttccgatacgtatgtgaagggccttcgcacggtgggctgcctggtgcttctagtgaa
aagaacaagaaatcataccctcaggtcaaaatctgcaattatgttggacctgcaaaagta
attgtccagttagttactaatgggaaatacgtccacttacacgctcacagcttggtgggt
aaattctgcgaggacggagtgtgcacggttaccgcaggacccaaggacatggttgtaggg
tttgcaaatcttggaatacttcatgtcacgaagaagaaagtgtttgaaactctggaaaca
cggatgatagatgcttgcaagaagggatacaacccaggactcctggtgcatccggaactc
agctatctgcaggcagaaggatgcggagacaggcagctaactgaacgggagagggaaatc
atccgccaggcagccatccagcagaccaaggagatggatctcagcgtggtgcggctcatg
ttcacagcctttctccccgacagcaacggcagcttcacacgcaaactggatcccgttata
tccgatgcgatatatgacagcaaagctcccaatgcctccaacctaaaaattgtaagaatg
gacagaacagcagggtgtgtgacaggaggggaagagatttacctgctctgtgacaaggtt
cagaaagatgatattcaaatacgtttctatgaagaggacgagaatggtggtatgtgggaa
ggctttggagatttttctcctacagatgtacatagacagtttgctattgtgttcaaaaca
cccaagtaccgagatgtcaatatcacaaagccagcatctgtatttgtacaactgcgtagg
aaatctgatctagaaacaagcgaaccaaagccttttctctactatccggaaatcaaagat
aaagaagaagtgcagaggaaacgacagaagctcatgccgaacttctccgatggctatggg
ggaggcagtggcaccggaggtggtggcatgtatggaggggcaggtggcagtgctggctct
ggattcagttttccttcatatggatactctgcttttggagggatgcaattccatcctggc
acaacaaagtccaatgctggcatgaaacatgaaggtctatcaaattgcatggctgaacaa
gacagaaagagctgtgataaacaaagtgacgaatgggacatgaaatgtgatgtgaaggtg
gaaactgtggagaggactgaatgcagaacatctgctgttaatgagaaaaaggaggattct
ggtttttcctgcaagactgaagtaagcgaagcagattgcaggtggcaggatgctctgttc
ctggagaaggccatgcagcttgccaggcgccactgcaacgctctctttgattacgccgta
accggagatgtgaagatgctgctggcagctcagcgccatctcactgctgtccaggatgat
aatggggacaatgtccttcatttagcaattatccaccttcatactgagctggtgaaaaac
ctcttggaagtgatgcccgatttgaattacaatgacatcattaacatgagaaatgacctc
tatcagacccccctgcacctggcagtaatcacaaagcaggcaaaggtggtggaagagctg
ctgaaggctggagcagatgtcagcctcctggatcgccacggcaattctgtcttacattta
gctgctactgaaggagatgacaagattttgagtctactcctcaggcatgagaaggtatct
ccaatggtcaacttccccaatggtgaaggtctcagtgcaattcacatggtggtaatggca
aatagcatgtcctgcctcaaacatctgattgctgctggagttaacatcaatgctcaggaa
caaaaatctggacgaactgcattgcatttggctgttgaacaagagaacatccccttggca
ggctgccttttgcttgagggtgatgcagatgtggacagcactacatatgatgggacaact
ccacttcacatagcagctggaaggggctcaacaaaattggcagcagttctcaaagcagca
ggtgcaaatcctcacattgagaactttgagccattgtttgatctagatgatgtgaaagat
ggtgaagatgatgatgaagggattgtgcctggaacaacaccactggatatggcggccaac
agtgaggtctatgacatattaaatggcaaaccctatgagtcagcagaggttttggaggac
ttactcacacaaggacatttgagagagttgaatgagaattccaagatgcagctttacaaa
ctattggaattgcctgatccaaccaaaaactggtccaccctagcacaaaaactgggtctt
ggcatccttaataatgccttcaggttgagcccttccccatcgaagactctgctggataac
tatgaggtttctggtggtacagttcaagagctgatcacagctttgagacagatggatcac
agagaagccatagaaataattcaggaagcactatccatctcacacagatcatctcccttg
gaggagagtacagcaaaagctcttccatcatcgtcaccactcacctttgcaagagataca
ggtgagctcgataatagcagattccaagacacggaaagtacctgtgacagcggtgtggag
acctccttccgcaagctgagtttcacttactcagactctctgaacagcaagtcctcacta
acactcagcaaaatggccctgggctatggacatgaaagttcagggcaaagcaattacata
gctgactag
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