Ficedula albicollis (collared flycatcher): 101815579
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Entry
101815579 CDS
T02815
Symbol
VPS50, CCDC132
Name
(RefSeq) VPS50, EARP/GARPII complex subunit
KO
K23288
syndetin
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101815579 (VPS50)
Membrane trafficking [BR:
fab04131
]
Protein recycling
Others
EARP complex
101815579 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
101815579
NCBI-ProteinID:
XP_005041154
UniProt:
U3K730
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All DBs
Position
2:24717796..24801822
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AA seq
967 aa
AA seq
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MQKIKSLMTRQGLRSPQESVNDLSPIESFRIPTKEELRELHEEPADPQAQQEIINSIEEI
YFSNDSFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVEELE
RVTSLQSGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAVGSSV
SDGNNVIGSEENSFDRNYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLD
VISRLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSS
FSILQLHEFKFMEQSRSPSVSPSKQPASAVSSSVTLFEQFCHGGNPFEIQADSKEDETED
VLASNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPIKSVSRETLRSRKRSDY
NLNKVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRN
DMFESTGLGLSSSRLRTTLNRIQESLIDLEVSADPSGTLTAAEERKEKVPSPHLSHLVVL
TSGNSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTASELR
KPVYWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNVYVDALLKEFEEFNRRLNDVSKRV
RIPLPVSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPI
PDKEFVETYIKAYYLTENDMESWIKEHREYSTKQLTNLVNICLGTYINKKARQKLLATID
DIDRPKR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccgccagggtctaagaagtcctcaggagagtgtt
aatgatctcagtcctattgaaagctttcggattcctacaaaggaggagctcagagaacta
catgaagaaccagctgatcctcaggcacaacaggaaataattaacagcattgaagaaatt
tatttttccaatgactcctttgatattgtgaagtatgaattggagaggcttcctccagta
cttagtcttcaagaactggaagagtacagagacaaactaaaacaacagcaagctgctgta
tctaagaaagttgcagatttaatccttgaaaagcagcctgcatatgttgaggagctggaa
cgtgttacatcattgcagagtggcctccagttagcagcagttatttgcacaaatggaaga
agacacctgaatatagcaaaggaaggcttcacacaaactagtttggggctacttgcaaat
cagaggaaacgacagttgcttattggactgctaaagtctctgagaacaataaaaacgctg
caaagaactgatgtgcgtttgagtgagatgttggaggaagaggattatccgggagctatt
cagctgtgcttggaatgccagaaagctgccagcactttcaaacactacagttgtataagc
gagttaaactcaaaactgcaagataccttggaacaaatagaggaacaactggacgtagca
ctttccaaaatatgcaagaattttgatatcaatcactatacaaaggttcagcaggcttac
aggctgcttggaaaaacacagacagcaatggaccagttacatatgcacttcacccaagcc
attcacaacactgtgtttcaagtagtccttggatacgtggagctgtgtgcaggaaacaca
gacaccaagtttcagaagttacagtacaaagacctctgtacacatattacatcagacagc
tacatcccatgccttgctgatctctgcaaagccctttgggaagtcatgctcagttactac
cgaacgatgcagtggcatgagaaccatgaccaagatgaggcagcagttgggtcttctgtt
tcagatggcaacaatgtgattggaagtgaagagaacagttttgaccgcaactatgtaaaa
aagaaattggagcacgggctttcacgaatatggcaggatgttcaattgaaagtgaaaaca
tatcttctgggaacagatctgtcaaactttaaatacgatgacttcatatttgtacttgat
gttatcagcaggctgatgcaggttggagaagaattttgtggcagtaagtctgaagttttg
caagaatctatcagaaaacaaagcgttaactatttcaaaacataccacagaacccgtctt
gaagagctaagaatgtttttggagaatgagacctgggaactttgtcctgttaaatcaagc
tttagtattttgcagcttcatgagttcaagttcatggagcagtcgcgttccccgtccgtg
tcgccgagcaagcagcctgcctctgcggtttcctcctccgtgacgctgtttgagcagttc
tgccacggaggaaaccccttcgaaattcaggctgacagcaaagaggatgagacagaagat
gtgttagcttccaatgggtatgagtcagatgaacaagaaaaaagtgcttatcaagagtat
gatagtgacagtgatgttcctgaagagttgaaaagagattatgtggatgagcagacagga
gatgccccgataaaaagtgtttctcgagaaactctgaggagcagaaagagatcagattat
aacctcaataaagtgaatgcacctattctaaccaacactacactgaatgtaataaggctt
gttgggaaatacatgcagatgatgaatattctgaaacctattgcatttgatgtgatccac
ttcatgtcccagctctttgattactatctgtatgcagtctatacattttttggccgaaat
gacatgtttgaatcaacaggactgggcctcagtagcagcaggttgcgcaccacactgaac
agaatccaggagagtctgattgacctggaggtgtctgctgatccttcaggaactctcaca
gctgctgaagagagaaaagagaaggtgccaagcccacatctcagtcatctcgtcgttttg
acatctggcaattcgctctatggtttggcagagagagtggtggccacagaatccttggta
tttctggctgagcaattcgaatttcttcagcctcatcttgatgcagtgatgccagctgcc
aagaagccttttcttcagcagttctattctcagacagtgtcaactgccagtgaactacgt
aaaccagtttattggattgttgctgctaaagccattgactatgaacaaatgcttcttctc
atggctaatgtgaaatgggatgtgaaggaaatcatgtcacagcacaatgtatacgtagat
gctcttttgaaggagtttgaagaattcaacaggaggttgaatgatgtgtctaagagagtc
cgtatcccattgccagtgtccaacatcctttgggagcactgcatacgcttggccaataga
actcttgtggaaggttatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatg
caactggattttcaacagttcttaatgaaactagagaagttaacagacattaggcctatt
ccagataaagaatttgtggagacctacattaaagcatactacctgacagaaaatgacatg
gaatcctggataaaagaacatagggaatattccactaagcagttgaccaatctggtgaat
atttgtctgggcacctacatcaacaaaaaggcaagacagaagctgttagctaccattgat
gacatagacaggcctaagagataa
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