Ficedula albicollis (collared flycatcher): 101815722
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Entry
101815722 CDS
T02815
Symbol
FUBP1
Name
(RefSeq) far upstream element binding protein 1
KO
K13210
far upstream element-binding protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101815722 (FUBP1)
03041 Spliceosome [BR:
fab03041
]
101815722 (FUBP1)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
101815722 (FUBP1)
Spliceosome [BR:
fab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101815722 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
SIMPL
Motif
Other DBs
NCBI-GeneID:
101815722
NCBI-ProteinID:
XP_005050271
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All DBs
Position
8:complement(14650807..14685745)
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AA seq
661 aa
AA seq
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MADYSTVPPPAAGAPGGGGGGAGGVNDAFKDALQRARQIAAKIGGDAGTAMNSNDYGYGG
QKRPLEDGDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQI
SRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPGFHHGDGP
GNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPYK
VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQN
DAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQAGNPGGPGPGGRGRGR
GQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPN
MKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGPHGVVPGPHGPPGPPGPGAPMG
PYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPNPPDPGKPGTDPNSAAWAAYYA
HYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVDYTKAWEEYYKKMGQAVPAPAG
APPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAPQCLPRPSTLGSAAKKHQTFNH
H
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccacggtgccccctcctgccgcgggcgcgcctgggggaggcggcggc
ggggctggaggagtgaacgatgcatttaaagacgcgctgcagagggctaggcagattgca
gcgaaaattggaggcgatgctggcacagcaatgaattcaaacgactacggttatggaggg
cagaaaagaccccttgaggatggagatcaaccagatgctaagaaagttgctccccagaac
gactcttttggaaatcagctaccaccgatgcatcagcagcaaaggtctgtgatgacagag
gagtacaaagttccagatgggatggttggattcataattggcagaggtggagagcagatc
tcacgcatacagcaagagtctggctgtaaaatacagattgcacctgatagtggaggcttg
cctgaaagatcatgtatgctaactggaacaccagagtctgttcagtcagcaaaaagatta
cttgatcagatagttgaaaagggaagacctgcacctggatttcatcatggtgatggacct
ggaaatgcagtccaagaaattatgatcccagcaagtaaagcaggattagttattgggaaa
ggtggagagacaattaaacaattacaggagcgggcaggtgtcaaaatggtcatgattcag
gatggtccacagaacactggtgcagacaagccccttaggataactggagacccttacaaa
gttcagcaagccaaggaaatggtgctggagttaattcgcgatcaaggtggctttagagag
gtgcgcaacgaatatgggtcaagaataggaggaaatgaagggatagacgttccaatacca
cgatttgctgtaggtattgtaattggaagaaatggagagatgattaaaaagatccagaat
gatgctggtgttaggatccagtttaagccagatgatggaacaactccagatagaatagcc
cagatcacagggcctcctgacagatgtcagcatgctgcagaaattattacagatctcctt
cgcagtgttcaggctggtaaccctggtggaccaggacctggtggtcgaggaaggggtaga
ggccaaggcaactggaacatggggcctcctggtggattacaggagttcaattttattgtc
cctactggcaaaactggattaatcatcggaaaaggtggtgaaactattaaaagtataagc
caacagtctggtgctagaatagaacttcagagaaatcctccaccaaatgctgatccaaac
atgaagatgtttactatccgtggaacaccccagcaaatagattatgcacgacaacttata
gaagaaaaaattggaggtccagtgaatccattgggtccacccgttccccatggtccccat
ggtgttgttcctggcccgcatggacctcctgggccaccaggtcctggtgctcccatggga
ccatataatccagctccttataacccaggccctcctggtcctgcacctcatggtcctcca
gctccatatgctccacagggatggggaaatgcttatccacactggcagccaccaaaccca
ccagacccaggtaagccaggaacagatcccaattcagcagcgtgggcagcttattatgct
cattactatcagcagcaagcacagccaccacctgcagcaccacctggtggaccagctaca
acccaaactaatggacaaggagatcagccaaacccagcaccagcagggcaggttgactat
accaaggcctgggaggagtactacaaaaaaatgggtcaagctgttcctgcccctgcgggg
gctcctccgggcggtcagccagattacagcgcggcgtgggctgagtactacaggcagcag
gcagcgtactacgctcagacaagtccacagggaatgccacagcatcctccagcaccacag
tgccttcccagaccttccaccttaggttctgctgcaaaaaagcatcagacatttaatcat
cactga
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