Ficedula albicollis (collared flycatcher): 101815728
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Entry
101815728 CDS
T02815
Symbol
SNX1
Name
(RefSeq) sorting nexin 1
KO
K17917
sorting nexin-1/2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101815728 (SNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101815728 (SNX1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
fab04990
]
101815728 (SNX1)
Membrane trafficking [BR:
fab04131
]
Endocytosis
Macropinocytosis
Sorting nexins
101815728 (SNX1)
Domain-containing proteins not elsewhere classified [BR:
fab04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101815728 (SNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
MVD-like_N
HR1
Motif
Other DBs
NCBI-GeneID:
101815728
NCBI-ProteinID:
XP_005051881
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All DBs
Position
10:3332302..3345352
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AA seq
496 aa
AA seq
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MVHPGTSSRIKEGGGGAMPLDLCPFRGNLSNSPAPKAESPLPVSSSSKENGVHVEQDDQD
LFADATVELSLDNTQNNQKEVAKASNPLPSLDIAASSSRNLSKSYEELEEEEQEDKFDLT
VGVSDPEKVGDGMNAYVAYKVSTQTSMPMFRSKQFSVKRRFSDFLGLYDKLSEKHAQNGF
IVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLRRVVSHPTMLQDPDVREFLE
KEELPRAVGTQTLSGAGIMKMFNKATDAVSKMTIKMNESDIWFEEKLQEVECEDQRLRKL
HAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHHEQAN
NDFFLLAELLGDYIRLLSVVKGAFDQRMRTWQRWQDAQTMLQKKREMEARLLWANKPDKL
QQAKDEISEWESRVTQYERDFERISAVIRKEVIRFEKEKSKDFRNHVTKYLETLLNSQQQ
LVKYWEAFLPEAKAIS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggttcatcctgggacgtcttcaaggataaaggaggggggagggggcgcgatgcctctg
gacttgtgccccttcagggggaacctcagcaactccccagccccaaaagcagaatctcct
ctccctgtgagcagctcctccaaagagaatggagttcatgtggagcaggatgatcaggac
ctatttgcagatgccactgtggagctgtcccttgacaacactcagaacaaccagaaggag
gtggccaaagcatccaatcctttgccctcattagacatagcagcaagttcttctagaaac
ctttcaaagagctatgaggagctggaagaagaggagcaggaggacaaatttgacctgact
gtgggagtgagtgacccagagaaagttggggatggcatgaatgcctacgtagcctacaaa
gtgtcaacacagaccagcatgccgatgttcaggagcaagcagttctcagtcaaaaggagg
ttcagtgacttcctggggctctatgacaagctgtcggagaaacacgcccagaatgggttc
attgtccctccgccgcccgagaagagcctcataggcatgaccaaagtgaaagttgggaaa
gaagattcctcctctgcagagttcctagaaaaacgtcgggctgctctagagaggtaccta
cggagagtggtcagccatccaaccatgctgcaggacccggatgtcagggagttcttggag
aaggaggagctcccaagagcagtaggaacccagaccttgagtggagcaggaataatgaag
atgttcaacaaagctacggatgctgtcagtaagatgaccatcaagatgaatgaatcggac
atttggttcgaggagaagctgcaggaggtggagtgcgaggaccagcggctgcgcaagctg
cacgctgtggtggagacgctggtgaaccaccgcaaagagctggcactgaacacagcccag
tttgccaagagtctggccatgctgggaagctcagaggataacacagccctgtcccgggcc
ttgtcccagctggctgaggtggaggagaagattgagcaactgcaccatgaacaggctaac
aatgacttcttcctcctggctgagctcctgggggactacatccgcctgctctcggttgta
aagggagcctttgaccagcgcatgaggacctggcagcggtggcaggatgcccagaccatg
ctccagaagaagagggagatggaggccaggctgctgtgggcaaacaaacctgacaagctg
cagcaggccaaggatgagatttcagagtgggagtcccgggtgacacagtacgaaagggac
tttgagcggatttctgctgtcatccgtaaggaagtgatacggtttgagaaagagaaatct
aaggacttcagaaaccatgtcacgaaataccttgagacgttattaaactctcagcaacag
ctggtgaagtactgggaagcgttcctgcccgaagccaaggccatttcttaa
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