Ficedula albicollis (collared flycatcher): 101815867
Help
Entry
101815867 CDS
T02815
Symbol
CNTN4
Name
(RefSeq) contactin 4
KO
K06762
contactin 4
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101815867 (CNTN4)
Cell adhesion molecules [BR:
fab04515
]
Immunoglobulin superfamily
Contactins
101815867 (CNTN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Izumo-Ig
Ig_C17orf99
Sp38
V-set_CD47
C2-set_2
Pur_ac_phosph_N
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
101815867
NCBI-ProteinID:
XP_016156913
LinkDB
All DBs
Position
12:19716669..19968397
Genome browser
AA seq
1029 aa
AA seq
DB search
MRLLWELLVLHSVLLCLADDNTLHGPVFLQEPNSLIFPLDSEEKKVKLSCEVKGNPRPTI
GWKLNGSSIEVGRDYRYSLLEGSLLISNPSHSQDAGTYQCVATNPFGTIVSREAQLQFAY
LESFKTRTRSTVSVRQGQGMVLLCGPPPHAGELTYAWIFNEYPSFVQQDSRRFVSQETGN
LYIAKVESSDAGNYTCVVTNTVTSGRVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSA
KGTTVKLECFALGNPVPTISWRRADGKQLPRKARRHRSSALLEIPNFQQEDAGPYECLAE
NVRGRNVARGQLTFYARPSWTQRIGDVRAALEERVSWECRASGRPKPSYRWLKDGEPLLP
QGRVQLEQGSLTIPNVSLSDAGMYQCVAENRHGAILASAELSVVAIGPDFSKTLLKKLTL
VKVGGEVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDAGSYTCV
ATNHFGTASSTGSLLVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWTFNGH
LIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPG
PPEAVTIDEVTDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEVIDGRTLT
ATVVGLNPWVEYEFRVVAANLIGIGEPSSPSERRRTEEALPEVTPANVSGGGGSKSELVI
TWETVPEELQNGGGFGYVVAFRPLGTVSWMQTVVASPDAARYVFRNESLPPFSPYEVKVG
VYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSLSASDVEVSWAPPWENQHKGRIQGYE
VRCWRHDEKEENAKRIRTVGNQTSTRVSNLRGNALYHLAVRAYNTAGTGPSSAAVNVTTR
KPPPSQPPGNIVWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRQGSTSVIETNKTS
VELSLPFEEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSSACTLSALSTIM
ISLTARSSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatgggagctgctggtgctgcactcggtcctgctgtgcctggcagatgac
aacaccctgcacgggccggttttcctccaggagcccaacagcctcatcttccccttggac
tcggaggagaagaaagtgaagctgagctgtgaagtgaaaggaaaccccagaccaaccatt
gggtggaagttgaatggcagcagcatcgaggtgggcagggattaccgctacagcctgctg
gagggcagcctgctgatcagcaaccccagccacagccaggacgccggcacctaccagtgt
gtggccacaaaccccttcggcaccatcgtcagcagagaggcacagctgcagtttgcctac
cttgagagcttcaagacgcggacgaggagcacggtgtcggtgcgccagggccagggcatg
gtgctgctctgcgggcccccgccccacgccggcgagctcacctacgcctggatcttcaac
gagtaccccagcttcgtgcagcaggacagccggcgcttcgtgtcgcaggagacgggcaac
ctgtacatcgccaaggtggagagctcggacgcgggcaactacacctgcgtggtgaccaac
accgtgaccagcggccgcgtgctggggccgcccacgcccctggtgctcaggaacgacggg
gtgatgggagagtatgagcccaaaatagaagtgcagttcccagaaacggttccatctgcg
aaaggaaccacggtgaaactggagtgctttgccttgggcaacccagtgcccaccatcagc
tggaggcgggcggacgggaagcagctgcccaggaaggcgcggcggcaccgctccagcgcg
ctcctggagatccccaacttccagcaggaggacgccggcccctacgagtgcctggctgaa
aacgtcagggggaggaacgtggcacgaggacagctgacgttttatgcccggcccagctgg
acccagcgcatcggcgacgtgcgtgcggccctggaggagcgcgtgtcctgggagtgccgc
gccagcggccgccccaagccctcctaccgctggctcaaggacggggagcccctgctgccg
cagggcagggtgcagctggagcagggctccctcaccatccccaacgtcagcctgtcggac
gcggggatgtaccagtgcgtggccgagaacaggcacggcgccatcctggccagcgcggag
ctcagcgtcgtcgccatcggtccagacttttccaaaactctgctgaagaagttaactctt
gttaaagtgggtggtgaagtcatcattgagtgcaagcccaaagcctcccccagacctact
tattcttggaagaaaggaaaagacatcctaagagagaatgagagaatcacagttttggat
gacgggagcctgcgcatcgtcaacgtcaccaaatcggacgcggggagctacacctgcgtg
gccaccaaccactttgggacagccagcagcacgggcagcctgctggtcaaagatccaacc
cgggtcatggtgtcccctttcagcatggatgtcacagttggggagagcattgtcctgcct
tgccaggtgtcccacgaccactccctggacattgtgttcacctggacgttcaatgggcac
ctgatagactttgagaaggatggggatcactttgaaagggttggaggacaggattcagct
ggtgatttgatgatcaggagcatccagctgaagcacgcagggaaatacgtctgcatggtg
caaacaagtgtggacaagctctcagctgctgcagacctgattgtaagaggtcccccaggt
ccccctgaggctgtgaccatcgatgaggtcactgacaccacggcccagctgtcctggagg
ccgggggcagacaaccacagccccatcaccatgtacgtggtgcaggcacgcacgcccttc
tcggtgggctggcaggcagtgagcacagtgcccgaggtgatcgacggcaggacgctcacg
gccacggtggtggggctgaacccctgggtggagtacgagttccgagtggtggctgccaac
ctgatcggcatcggggagcccagcagcccctcggagaggaggaggactgaggaggctctc
cctgaggtgaccccagctaatgtcagtggaggtggaggcagcaagtctgagctggtcatt
acctgggagacggtgcccgaggagctgcagaacgggggtggctttggctacgtggtggcg
ttccggccgctgggcacggtcagctggatgcagacggtggtggcctcgcccgacgccgcg
cgctacgtgttccgcaacgagagcctgccgcccttctcgccctacgaggtcaaggtgggc
gtctacaacaacaagggcgaaggctccttcagccccgtcaccgtcgtctactcggcggag
gaagagccaacgagagccccaaccactgttttggcaagaagcctttctgcctcagacgtc
gaagtttcttgggctcccccgtgggagaaccagcacaaaggaagaatacagggatatgag
gtgcgctgctggcggcacgacgagaaggaggagaacgccaaaaggatccggacggtgggg
aaccaaacttccaccagagtcagcaacctgaggggcaatgccctctaccacctggcagtc
agggcgtacaacacggctggcaccggcccctccagcgccgccgtcaacgtcaccaccaga
aagccaccaccgagtcagccccccgggaacatcgtgtggaattcatccgactccaagatc
atcctgaactgggaccaggtgaaagccttggacaacgagtcagaagtgagaggctacaaa
gttttgtacaggtggaacaggcagggcagcacatctgtcatagagacaaacaaaacctcc
gtggagctgtccctgccctttgaggaggattacatcatcgagatcaaacccttcagcgac
ggcggcgacggcagcagcagcgagcaaatccgaatcccaaagatatccaatgcctacgcc
agaggctcgggctcgtcgacctccagcgcctgcaccctgtcagccctcagcacaatcatg
atctccctcacagcccgctccagtttatga
DBGET
integrated database retrieval system
