Ficedula albicollis (collared flycatcher): 101815890
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Entry
101815890 CDS
T02815
Symbol
RPGR
Name
(RefSeq) retinitis pigmentosa GTPase regulator
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fab03037
]
101815890 (RPGR)
Cilium and associated proteins [BR:
fab03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101815890 (RPGR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
101815890
NCBI-ProteinID:
XP_005037339
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All DBs
Position
1:9386149..9426305
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AA seq
1508 aa
AA seq
DB search
MVTECRGSARESGAVFTFGKSKFAEDIPSKFWFKNDKPVLISCGDEHTAIITGKGKLYMF
GSNDWGQLGLGSKNTVSKPTCVKALKPEKPKLAVCGRNHTLVYTEKGNVYAAGGNSEGQL
GLGDTEERTTFHLISFFTNQHKIKQLSAGSYTSAAVTEDGQLFVWGDNSEGQIGLASEAS
VSIPCKVDIGKPIAFVSCGYYHSALITGDGELYTFGEPVNGKLGLFPEQLKNNRVPQPVL
GIMEKVKKVACGGEHTVVLTEKAVYTFGLGQYGQLGHGTFVFESSVPKPVKHLKRHKICN
IACGENHTAVIAENGLMFTFGDGRHGKLGFGEESFTNLFDPTLCYNFLKFTVLLVACGGC
HMLVFAAPRPKGSEVLLEDLFEPRLTATIPQSSGDFVLANTLQLSAARMRRRERERSPEQ
FARMAQTLPPMGESFLKSSLPVTSNTSPFWFSATSRPKSESGRDGDHEKGEVACGGCHML
VFAAPRPKGSEVLLEDLFEPRLTATIPQSSGDFVLANTLQLSAARMRRRERERSPEQFAR
MAQTLPPMGESFLKSSLPVTSNTSPFWFSATSRPKSESGRDGDHEKENNHQKDKPGEVSS
EQDSDNENTDRNLGDTTDILNVTHAMKLNPGDWSLKLSPLQKQKKNSKNVKLKRDGKGGL
KTKDSDFTKEGSKFKSSSLQKQSSISGSPGQDLEKRSAFVGKPVAKKSIKKGKFEHAQSD
TTLKSDAQEITGDKSIIVKREKEYVENPDFFRQDATYNLPTENQILTEKISSSNKKPKAV
KPKQSLKIEVLPSAPRDQPQTDSLTVQEYNPVKKEGSQKTTESQSKIKDGVEKSDKCERI
SVTGQESSAEQKELKKKHQFLKQISVTSSSSSSTEESTNDLQKYILKEEVHYEHRVLQRT
RRTVTHLDLEKDSEIEEMQATNNEKESVEQTDVKSLNEEETSSDAKSDVDRPLEIKNEEE
SEQEQENEDSEKGEDEKEKLDETIDSEGKLGEEEEEGEVEKDRDEVSVEKDEEGKDNEEE
TEKESQAERDSGNEGAEETEEVSQRDGKDQEDEQGRLMEEEEMVSEGEKEDMEEKYEKEE
GTEKEKEQVKSEGRDESEEGEEDTEEKEEKDVEAEEEGEDEKEGEEEKERMNEKDKEGEE
EELGESLAGREEEVSEEKQDEEDANTKTKEVGEDGVEEGKDGEDEVEEEREDEKEEGTEA
EAEGEEGEEDEKEEEEGESEQKGEGKGKGEGVEEDEGVGEEEESEGVEAEGDEETGEEEE
EVEEGEEGGQEEKEGEREEGEEEKEEGEEEEEEEEEEEEEEEEEEEKEEEEEEVEEEEEX
KEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEKGKKDEEEEEGEEG
EGGEEKGEEGEEEEEEGGVGGEGEEEEEEEEDEEEGDVGDEEEEDEGEEDEGEEEEAEEE
EKAKDKRKSDSRKLPGKKSKPRKPEKTESSALPNSSKQNMKSKRHIANGLHNSEQFWNNV
LPHYLTLK
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggttactgagtgtcgcggttcggcccgcgaatcaggtgctgttttcacattcgggaaa
agcaaatttgcagaagatattcctagcaagttctggttcaaaaatgacaagcctgtactt
atatcatgtggagatgaacatacagctattattacaggaaaaggcaaactctatatgttt
ggcagtaatgactggggccagttaggactaggatcgaagaacactgtcagcaaaccaacg
tgtgttaaagctttaaaaccagaaaaaccaaaacttgctgtttgtggaagaaaccacact
ttagtttacacagaaaaaggaaatgtctatgctgctggaggaaacagtgaaggccagttg
ggattaggtgacacagaggaaaggaccacatttcatttaattagtttttttaccaaccag
cacaagatcaagcaactatcagctggatcatacacctcagcagcagtaactgaggatggg
cagctctttgtatggggtgataattcagaaggtcagattggtctggccagtgaagcctct
gtcagtatcccctgtaaagtggatattggaaaacctattgcctttgtatcctgtggatat
tatcattctgccctgattacaggagatggtgagctctatacttttggagaacctgtgaat
gggaaactgggattattccctgaacagctcaagaacaatagagtcccacagcctgtcctg
ggaattatggaaaaggttaaaaaagttgcttgtggtggagaacacactgtggtgctgaca
gagaaagctgtttatacttttggccttggacaatatggacagctgggacatggaactttt
gtgtttgaaagttcagtaccgaagcctgtgaaacatttgaagaggcataaaatatgtaac
attgcatgtggggaaaatcacactgctgtgatagcagagaatggcctcatgtttactttt
ggagatggacgacatggcaagttaggatttggagaagagagttttacaaatttgtttgat
cccactctgtgttacaatttcttgaagttcacagtccttttggttgcttgtggtggttgt
cacatgctggtttttgctgctccaagacctaaaggatctgaagtactcttggaagattta
tttgagcctcgtttgactgctacaatccctcaatccagtggggactttgtactagcaaac
actttgcaactatcagcagcacgaatgcgacgtcgagagagggaaagatcaccagagcaa
tttgctagaatggcacaaactctgcctccaatgggggaaagcttcttaaaatcttcattg
cctgtgacaagcaacaccagcccattctggttttctgcaacaagtcgtcctaaatctgaa
tctgggagggatggagaccatgaaaaaggtgaagttgcttgtggtggttgtcacatgctg
gtttttgctgctccaagacctaaaggatctgaagtactcttggaagatttatttgagcct
cgtttgactgctacaatccctcaatccagtggggactttgtactagcaaacactttgcaa
ctatcagcagcacgaatgcgacgtcgagagagggaaagatcaccagagcaatttgctaga
atggcacaaacgctgcctccaatgggggaaagcttcttaaaatcttcattgcctgtgaca
agcaacaccagcccattctggttttctgcaacaagtcgtcctaaatctgaatctgggagg
gatggagaccatgaaaaagaaaacaatcatcaaaaagataaacctggtgaagtctcttca
gaacaagattcagataatgaaaatactgacagaaaccttggggatacaactgacatccta
aatgtgacacatgcaatgaagttgaatcctggtgactggtccttaaaattatcaccactc
caaaaacagaagaagaacagtaaaaatgtgaaactgaaaagagatggtaagggtgggcta
aaaaccaaggattctgatttcacaaaggagggctcaaaattcaagtctagctctttacaa
aagcagtcctcaatttcagggtcacctggacaagatttagaaaagaggagtgcctttgta
gggaagcctgtggccaaaaaaagtataaagaaaggtaaatttgagcatgcacaaagtgat
actactttgaaaagtgatgctcaagaaattactggggacaaaagcataatagtgaaaagg
gagaaagaatatgtggaaaatcctgatttttttagacaggatgcaacttataatcttccc
actgaaaatcaaattctgactgaaaaaataagttcttctaataaaaagccaaaagctgtt
aaacctaagcaatcccttaaaatagaggtacttccttctgctcccagggatcagccccag
actgattcattaactgtgcaagaatacaatcctgttaaaaaggaagggagtcagaaaaca
acagaaagtcaaagcaaaataaaggatggtgttgaaaaatcggacaagtgtgaaagaata
agtgtcacaggacaagaaagtagtgcagaacagaaggagcttaaaaaaaagcatcagttt
ttgaaacaaatatctgtaacttcatcatcatcatcttcaactgaggaaagtactaatgat
ctccaaaaatacatacttaaggaagaggtgcactatgaacacagagttctccagaggaca
aggagaacagtgacacatctggacttagaaaaagacagtgagattgaggagatgcaagct
acaaacaatgagaaagaaagtgtagagcagactgatgtaaaaagcctgaatgaggaagaa
acaagctctgatgctaaatctgatgtagacaggccattagaaattaagaatgaggaggaa
tctgagcaggagcaggagaatgaggacagtgaaaagggtgaagatgaaaaagaaaaactg
gatgaaacaattgacagtgaaggtaaactaggggaggaagaagaagagggtgaagttgaa
aaagacagagatgaagtttcagtagaaaaagatgaagagggaaaagataatgaggaagaa
actgaaaaagaatcacaggctgaaagagacagtgggaatgagggtgcagaggagactgag
gaggtcagccagagagatggcaaagatcaagaagatgagcaaggcaggttgatggaagaa
gaagaaatggtgagtgagggagaaaaggaggatatggaggagaaatatgagaaagaggaa
ggcactgaaaaagagaaagagcaggttaaaagtgagggaagagatgagagtgaggaagga
gaagaagatacagaggaaaaggaagaaaaagatgtagaggcagaagaggaaggagaagat
gaaaaggaaggtgaagaagaaaaagaaagaatgaatgaaaaagacaaagaaggtgaagag
gaagagttgggagaatcattggcagggagggaagaagaggtatccgaagaaaaacaggat
gaggaagatgcaaatacaaaaactaaggaagtgggtgaggatggagtggaagaaggaaaa
gatggggaggatgaagtggaagaggaaagagaagatgagaaagaggaaggaacagaggca
gaagcagaaggggaggagggggaagaagatgaaaaggaagaagaggagggggaaagtgaa
cagaaaggggaaggtaaaggaaagggagaaggagtggaagaagatgagggagtaggggag
gaagaagagagtgaaggagtggaagcagagggagatgaggaaacaggagaggaagaagaa
gaggtagaggagggagaagagggagggcaggaagaaaaagaaggagaaagggaagagggg
gaagaagaaaaagaagagggtgaagaagaagaagaggaagaagaagaagaggaagaagaa
gaggaagaggaagaagagaaagaagaagaagaagaagaagtagaagaagaagaagaanna
aaagaagaagaagaggaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagagggggaagaagaaaaagggaaaaaggatgaggaggaagaagaaggagaagaggga
gaggggggagaagaaaaaggggaagagggtgaggaggaagaagaagaagggggagtgggg
ggagaaggtgaagaggaagaggaggaagaagaagacgaggaggaaggggatgtaggagat
gaggaagaagaggatgagggagaagaagatgagggtgaggaagaagaagcagaggaagag
gaaaaagcaaaagataaaaggaaaagtgatagtaggaaacttccaggaaagaaaagcaaa
cccaggaagccagaaaagacagaaagttctgctttaccaaacagctctaaacaaaacatg
aaatccaaacgtcacatagcaaatggtttacataattcagaacaattttggaacaatgtg
ctacctcattatttaacactaaagtag
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