Ficedula albicollis (collared flycatcher): 101815901
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Entry
101815901 CDS
T02815
Symbol
ROBO1
Name
(RefSeq) roundabout guidance receptor 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101815901 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101815901 (ROBO1)
Cell adhesion molecules [BR:
fab04515
]
Immunoglobulin superfamily
ROBO family
101815901 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
Big_4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
101815901
NCBI-ProteinID:
XP_005038869
LinkDB
All DBs
Position
1:complement(111423635..112153376)
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AA seq
1657 aa
AA seq
DB search
MKWKHYPFLAVVAVFSLSRCHQLLGQLIPDSEDLERGSDSGTPLPTADNGDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGTPLDDKDERITIRGGKLMITYTRKNDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKARYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQVVSEPPQFVVKP
RDQVAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITN
VQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLNCV
ATGTLMPTILWKKDGILISTQDSRIKQLETGALQIRYAKLGDTGRYTCIASTPSGEATWS
AFIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIE
AFSHASGSSWQTVAENVKTESFAVKGLKPNAIYLFLVRAANAYGLSDPSQISDPVKTQDV
PPTSQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPTPTS
YGESEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFNEFQGADSEVKFAKTLEEAPSA
PPQSVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEYKVWCLGNESRYHINKTVDGTTFSV
VIPSLVPGIRYSVEVAASTGAGPGVKSDPQFIQLDSHGNPVSSEDQVSLAQQISDVVKQP
AFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVS
SGGRPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTSGNGNSDSNLTTYSRPADCIA
NYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVSQPGQPTPYATTQ
LIQSSISNNVNNGSGDTNEKHWKPSVQQKQEAPPIQYNIMEQNKLNKDYRVNDNIAPTIP
YNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQAGMNWADLLPPPPAHPPPHS
NSEDYSLSVDESYDQEIPCPVPPARMYLQQDELEEEEEDERGPTPPVRGAASSPAAVSYS
HQSTATLTPSPQEELQPMLQDCQEDLGHTQHQPDRRRQPVSPPPPPRPISPPHTYGYISG
PLVSDMDTDAPEEEEDEADVEVAKMQNRRLLLRGLEQTPASSVGDLESSVTGSMINGWGS
ASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMHEAAGGRRHFHAS
HCPRPTSPVSTDSNMSAVVIQKVRPAKKQKHQPGHLRREVYTDDLPPPPVPPPAVKSPTA
QSKSQLEVRPVLLPKLASMEARTDRSADRKGASYKGREGAEGRQHPDLRTGSGERREPQE
PPGDPKPRAGKAPKRDGAPAKSHLLQEDILPYSRPTFPTSNNPRDPSSSSSMSSRGSGGR
QRADQTNLARRNVAEMQVLGTYEQEEEEEEEMEETES
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacattatccttttctggctgtagtagctgtattcagcctttccagatgc
catcagttactgggccagctcattccagactccgaggacctagagagggggagcgacagc
gggacgccactgcccaccgctgataacggcgacaactcgctgggctacacaggttcccgt
cttcgacaggaagatttcccgccgcggatcgtggagcacccctccgatctgatagtttcc
aaaggagaaccagccactctgaactgcaaagcagaggggaggccgacccccaccatcgag
tggtacaaggggggagagcgggtggagacggacaaggatgacccgcgctcgcaccgcatg
ctgctgcccagcggatctttgttcttcctgcgcatcgtgcacgggcgcaagagccggccg
gacgaaggggtctacgtgtgtgtggcaaggaattacctgggggaagctgtaagtcacaat
gcatcgctggaggtggcaattctacgggatgacttcagacaaaatccatcagatgtcatg
gtagctgtgggggaacctgcagtgatggagtgccagcccccgagaggtcacccagagccc
actatatcatggaagaaagatggcacccctctagatgacaaagatgagagaatcacaatc
agaggaggaaagcttatgatcacgtacacaagaaagaatgatgctggcaaatacgtttgt
gttggaacaaatatggttggagaacgtgaaagtgaagttgcagagctcactgttttagag
agaccatcttttgtgaagagacccagcaatttggcagtaactgtggacgacagtgcagag
tttaagtgtgaggccagaggggacccagtccctacagtgagatggaggaaagatgatggg
gagctaccaaaagcaagatacgaaatccgtgatgatcataccttgaaaatcaggaaagtt
atggcaggagacatgggatcatacacttgtgttgcagaaaatatggttggaaaagctgag
gcatcagcaactttaacagttcaagttgtgtctgagcctccacagtttgttgtaaagcct
cgagaccaggtggctgcactggggagaacagtgactttccagtgtgaagcaacaggaaac
cctcagccagccatcttctggaggagagaagggagtcagaatctgcttttctcataccag
ccccctcagtcatccagccgattttcagtttcccagacaggagacctcaccatcaccaat
gtccagagatctgatgttggctactacatctgccagactttaaatgttgcaggaagtatc
ataacaaaagcctacttggaagttacagatgtgattgcagaccggcctccccctgtcatt
cggcagggccccgtgaatcagactgtagctgtagatgggactttagtgctgaactgtgtg
gccacaggcactttaatgcccactatcctctggaaaaaggatggcatcctcatttccacc
caagactcccgcatcaagcagctggagacaggagcactgcagatcagatatgccaagctg
ggcgacacgggccggtacacctgcatcgcctcgacgccgagcggcgaagccacctggagt
gcattcatagaggtccaagagtttggagtcccagtgcagccaccacgacccactgaccca
aacttgattcctagtgctccatcaaagcctgaggttacagatgtcagcagaaatacagta
acattgtcatggcaacctaatttgaattcaggtgcaacaccaacctcttacatcattgag
gccttcagccatgcatcagggagcagctggcagactgtagctgaaaatgtgaaaactgag
agttttgcagttaaagggctaaaacctaatgcaatttacctcttccttgtgagagcagct
aatgcatatgggctgagcgacccaagccaaatatctgatccagtgaaaactcaagatgtt
ccgccaacaagccaaggtgtggatcacaagcaggtccagagagagctgggtgacgtggtg
ctgcatctgcacaaccctactatcctttcctcctcctcaattgaagttcattggactgtg
gaccagcaatcccagtatattcaaggatataaaattctgtaccgacctacaccaacatct
tatggagaatcagagtggttaatctttgaagtgaggactccaaccaaaaacagtgttatc
attcccgagctgaagaaaggtgtaaactatgaaatcaaggcccgccctttctttaatgag
tttcagggagcagatagtgaagtgaaattcgcaaagaccctggaagaagctcctagcgct
ccacctcagagtgtttcagtgactaagaacgatgggaacgggacagcaatcgtggtcacc
tggcagccaccccctgaggacaaccagaacgggatggttcaggagtacaaggtttggtgc
cttggcaatgagagcagataccacataaacaagacagtggatggaaccaccttctccgtg
gtcatcccctccctcgttcccgggatccgatacagcgtggaagtggctgcaagcactggg
gcaggacctggagtgaaaagcgatccccaatttatccagctagattctcatggaaacccc
gtgtcttcagaagatcaagtcagtttagcccagcagatttctgatgtggtaaagcagcct
gccttcattgctgggattggtgcagcctgttggattatcctcatggtcttcagcatctgg
ttgtaccgccacaggaagaagaggaatggactcacgagtacttatgctggtatcagaaaa
gtcccgtcttttaccttcacaccaacagtaacgtatcagagaggaggagaggccgtaagc
agtggaggcaggcctggactcctaaacatcagtgaaccagccactcagccatggttagca
gatacttggcctaacacagggaacaatcacaatgactgctccatcaactgctgcacctct
ggcaatggcaacagtgatagcaaccttacaacgtacagtcgaccagccgattgtatagca
aattacaacaatcagctggacaacaagcagacaaacctgatgttgcctgagtcaactgta
tatggggacgtggacctcagcaacaaaatcaatgagatgaaaaccttcaatagtccaaat
ctaaaggacggaagatttgtcagccagcctgggcagcccactccttatgccaccactcag
ctcatccagtccagtatcagcaataatgttaacaatggcagcggggacacgaatgagaaa
cactggaaaccctctgttcagcaaaagcaagaggctccacccatacagtacaacattatg
gagcaaaacaaattaaacaaagattaccgagtaaatgacaacattgctccaactattccc
tacaaccagtcatatgaccagaatacaggtggatcctacaacagctcagacagaggcagc
agtacatctgggagtcaagggcacaagaagggtgctcgcaccccaaaggctcccaagcag
gctggcatgaactgggcagatcttctgccaccccctccagcacatccacctccccacagc
aacagcgaagattacagcctttccgtggatgaaagctatgaccaagaaattccttgtcct
gtgccacctgcaaggatgtatctgcagcaggatgagctagaggaagaggaagaagatgag
cgaggtcctactccacctgtccgaggagcagcttcctctccagccgctgtctcctatagc
catcagtcaactgccactctcaccccctctccccaggaggaactccagcccatgttacag
gactgtcaggaggatctgggacacacacaacaccaacctgaccggagacgtcagcctgtg
agtcctccaccccctcccaggcccatctccccacctcacacctacggatacatctcgggg
cccttggtgtcggacatggacaccgacgccccggaggaggaggaggacgaggcggatgtc
gaggtggccaagatgcagaaccggcggctccttctgcgcggcctggagcagacgcccgcc
tccagcgttggggacctggagagctccgtgacaggctccatgatcaacggctggggctca
gcctctgaggaggacaacatctccagcgggcgctccagcgtcagctcctccgacggatcc
ttcttcaccgacgccgactttgcacaggcggtggcggcggccgccgagtacgccgggctc
aaggtggccaggcggcaaatgcacgaggcagcgggaggccgtagacattttcatgcatca
cactgtcccagacccaccagccctgtatctaccgacagcaacatgagtgctgttgtaata
cagaaggtccgacctgccaaaaagcaaaaacaccagccaggacatctgcgcagagaagtc
tacacagatgacttgccccctcctccggtgccccctccagccgtgaagtcgccgacggcg
cagtccaagtcgcagctggaggtgcggccggtgctgctgcccaagctcgcctccatggag
gccaggacggacagatccgccgacaggaagggagccagctacaagggcagggagggggcg
gagggcaggcagcaccccgacctcaggacgggctcgggggagcgcagggagccccaggag
ccgcccggcgaccccaaaccgcgagccggcaaagcaccgaaacgggacggcgcgccagca
aagagtcatcttctccaagaggacatcctgccatattctagaccaacgtttccaacatca
aataatcctagagatcccagctcctccagctccatgtcctcgagagggtcaggaggcaga
cagagggcagatcaaacaaatctagcccgaaggaatgttgcagaaatgcaagtactggga
acctatgaacaagaagaggaagaagaagaagagatggaggaaacagaaagctga
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integrated database retrieval system
