Ficedula albicollis (collared flycatcher): 101815980
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Entry
101815980 CDS
T02815
Symbol
FDFT1
Name
(RefSeq) farnesyl-diphosphate farnesyltransferase 1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab00100
Steroid biosynthesis
fab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
101815980 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fab01006
]
101815980 (FDFT1)
Enzymes [BR:
fab01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
101815980 (FDFT1)
Prenyltransferases [BR:
fab01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101815980 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Motif
Other DBs
NCBI-GeneID:
101815980
NCBI-ProteinID:
XP_005044492
UniProt:
U3JIK8
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All DBs
Position
3:complement(113756385..113772888)
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AA seq
418 aa
AA seq
DB search
MELLRKWLGHPEDIYNLLRFKMGGYRAVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMSIPLDVKVPMLHEFHSHLYQPDWKYTESKEKDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQNEWDKYCHYVAGLV
GIGLSRLFSASELEDSIVGQDTDLANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
AKKLSDLAKPENIDVAVQCLNELITNALHHVPDVLTYLSRLKNQSVFNFCAIPQVMAIAT
LAACYNNQQVFRGVVKIRKGQAVTLMMDATNIQAVKAIMYQYVEEIYQKIPSTDPSCRRT
QQVVAAVRARSLPAGPMASRHHYSPIYLSCAMLLAALSWQYLSTLARATQDYLQAGDN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgcggaaatggctgggccaccccgaggacatctacaacctgctgcgcttc
aagatgggcggctaccgcgccgtcatgccgcgcatggacacggactcgctgggatgtggc
ctccgcacctgctaccgctacctcaaccagaccagccgcagcttcgccgccgtcatccag
gctctggacggagagctgcgacatgcagtctgtatattctacctggttctccgtgccctg
gacactgtagaggatgacatgagcatccccttggatgtcaaggtgccgatgctgcacgag
ttccactcccatctctaccagccagactggaagtacacagagagcaaggagaaggacagg
caggtgctggaagacttcccaacgatctccatggagttcagaaatttgtccaaggtgtac
caggacgtgatttcagatatttgccacaagatgggcgttgggatggcagagttcttggaa
aaaaaggtggattctcagaatgagtgggataagtactgtcactatgttgctgggctggtg
gggattggcctctcccgtctcttctctgcatcagagctggaagattccatcgtggggcag
gacacagacctggcaaactccatgggcctcttcctacagaaaaccaacatcatccgtgac
tatctggaggaccagctggagggaagggagttctggccccgagaggtttggagcagatat
gccaagaagctctcggaccttgccaagccagagaacatcgacgtggccgtgcagtgcctc
aacgagctcatcaccaacgccctccaccacgtccctgacgtcctcacctacctgtcccgc
ctcaaaaaccaaagtgtcttcaacttctgtgccatcccccaggtgatggccatagccacg
ctggctgcctgctacaacaaccagcaggtgttcaggggggtggtgaagatccgcaagggc
caggctgtcaccctcatgatggatgccaccaacatacaagctgtcaaagccatcatgtac
cagtatgtggaagagatctaccagaagatcccgagcacggacccgtcgtgccgcaggacg
cagcaggtggtggccgccgtccgcgcccgcagcctgcccgccggccccatggcctcccgc
caccactactcgcccatctacctgtcctgcgccatgctgctggctgccctcagctggcag
tacctcagcaccctggccagggccacccaggactacctgcaggcaggggacaactga
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