Ficedula albicollis (collared flycatcher): 101815982
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Entry
101815982 CDS
T02815
Symbol
PKD2
Name
(RefSeq) polycystin 2, transient receptor potential cation channel
KO
K04986
polycystin 2
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fab03037
]
101815982 (PKD2)
04040 Ion channels [BR:
fab04040
]
101815982 (PKD2)
Cilium and associated proteins [BR:
fab03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101815982 (PKD2)
Ion channels [BR:
fab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101815982 (PKD2)
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GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
SU10_portal
Motif
Other DBs
NCBI-GeneID:
101815982
NCBI-ProteinID:
XP_016153330
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Position
4:11088363..11107163
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AA seq
763 aa
AA seq
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MEESNTSRERYLRSVLRELVTYMVFLVVLCVLTYGTVSSSMYYYTRVMSQLFLETPVSKT
ERTDFKTLSTMDDFWKFTEGPLLDGLYWEMWYNNKTMAENKSFIYYENLLLGVPRIRQLK
VRNGSCSIPEDLKDEIKDCYDVYSVANEDTAPFGLRNGTAWTYTNEKDLNGSSHWGLIAT
YSGAGYYQDLSRTREVTALQIASLKKNLWLDRGTRAAFIDFSVYNANINLFCVVRLLVEF
PATGGLVTSWQFQPVRLIHYISTFDFFLAACEMSFCLFVLYYMVEEVLEIRIHRLRYFRS
LWNCLDILIIVLSVVAIGISIYRTSTVDMLLKKLLEDQNSFPNFEPLAYWQMQFNNIAAV
TVFFVWIKLFKFVNFNRTMSQLSTTMSRCVKDVIGFAIMFFIIFLAYAQLAYLVFGTQID
DFSTFQDSIFTQFRIILGDFNFTEVEEANRILGPIYFTTFVFFMFFILLNMFLAIINDTY
SEVKSDMAQQKAEMELSDLIRKGYNKAMIKLKLKKTTVDDISESLRQGGGKLNFDELRQD
LKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKEREDLDLDRSSLPRPLSSRS
FPRSLDDSEEDEDEDSGHSSRRRGSSSSGVSYEEFQVLMRRVDRMEHSIGSIVSKIDAVI
VKLEAMERAKLKRRDVLGRLLDGVTEDERLGRDSEAHREQMERLVREELERWESDDTASQ
MSHRLGTPLGLGGQPRSRSSRPPSSQSDGLDAAAANGGSNVHG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcaacaccagcagagagcggtacttgcgaagtgttttacgggagctggtc
acgtacatggttttcctcgtggtcctgtgtgtcttgacttatgggacagtgagttccagt
atgtactattatacaagggttatgtcacagctcttcctggaaacacctgtgtcaaaaaca
gagagaactgatttcaaaactttgtccacaatggatgacttctggaagttcacagaaggc
cctttgctggatggtctttactgggagatgtggtacaacaacaaaaccatggcagaaaac
aaaagcttcatttattatgagaacctgctcctaggggtgcctcgcattcggcagctgaaa
gtcaggaatggttcgtgctccatacctgaagatctaaaggatgaaatcaaagactgctat
gatgtctattctgtagcaaatgaagacactgctccttttggactcaggaatggaactgcc
tggacctacaccaatgagaaggatttgaatgggagcagccactggggcttgattgccacg
tacagtggggctggttattaccaggacctctcgaggaccagagaagtgacagccctgcag
attgccagcctgaagaagaacctgtggctggacagagggaccagagcagccttcattgat
ttctctgtgtacaatgcaaacatcaacctattctgtgtggtcaggttgctagtggagttt
ccagccactggaggcctggttacatcttggcagtttcagcctgtgaggctgattcattac
atctccacttttgattttttcctggcagcctgtgaaatgtccttctgtctttttgttctg
tattatatggtggaagaggtcttagaaattcgcattcatcgactgcgctacttcagaagt
ctttggaattgccttgacatccttatcattgtgctgtctgtggtagctataggaattagc
atctataggacatcaactgttgatatgctcttgaagaagctgctggaagatcagaactca
ttccccaatttcgagcccttggcatattggcaaatgcagttcaacaacattgctgcagtc
acagtgttttttgtctggattaagcttttcaaatttgttaacttcaacagaacgatgagc
cagttatccaccacgatgtcccgctgcgtcaaagatgtcatcggctttgccattatgttt
tttattattttcttagcatatgcccagttggcctatcttgtctttggcactcaaattgat
gacttcagtactttccaggacagcatatttactcagttccgcatcattttgggagacttc
aacttcacagaggttgaagaagctaatcgaattttgggacccatttatttcactacattt
gtgttctttatgttcttcattcttttgaacatgtttttggccattatcaatgatacctac
tctgaagtcaaatcagatatggcacaacagaaggcagaaatggaattgtctgaccttatc
aggaagggctacaacaaagccatgatcaaacttaaactgaagaaaactactgttgatgac
atttcagaaagtctgagacaaggtggagggaagctcaattttgatgaactccggcaggat
ctcaaagggaaggggcacacggatgcagaaattgaagcaatatttaccaaatatgatcaa
gatggggaccaggaattgacagagcatgaacatcagcagatgagagatgacctggagaaa
gagagggaggatctggacctggacaggagctctctgccacgtcctctgagcagccgcagc
ttcccccggagcttggacgactctgaggaggatgaggatgaggacagcgggcacagctcc
aggaggaggggcagcagctctagtggggtttcctatgaagagttccaagtgctgatgagg
cgggtggatcgcatggagcattccatcggcagcatcgtctccaagatcgatgctgtcatc
gtgaagctggaagccatggagagggccaagctgaaaaggagagatgtcttgggaaggctg
ttagatggagtgacagaggatgagaggctgggccgggacagcgaggcgcaccgggagcag
atggagcggctggtgcgggaggagctggagcgctgggagtcggacgacacggcctcgcag
atgagccaccggctgggaacgcccctggggctgggcgggcagccccgctccaggagctcc
aggccgccctcctcccagtccgatggcctggatgcagcagcagcaaacgggggcagcaac
gtccatgggtag
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