Ficedula albicollis (collared flycatcher): 101816018
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Entry
101816018 CDS
T02815
Symbol
SYNC
Name
(RefSeq) syncoilin, intermediate filament protein
KO
K10377
syncoilin 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fab04812
]
101816018 (SYNC)
Cytoskeleton proteins [BR:
fab04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
101816018 (SYNC)
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Gene cluster
GFIT
Motif
Pfam:
Filament
CENP-H
FAZ1_C
Laminin_II
TPR_MLP1_2
DinB_2
DUF3452
TCAD7
BRE1
Motif
Other DBs
NCBI-GeneID:
101816018
NCBI-ProteinID:
XP_005058288
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Position
23:complement(5916677..5925544)
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AA seq
521 aa
AA seq
DB search
MCSAEPAALGSRGGRDLMAQPQPPPELQLDEARAPPAPQGAAEGGAPHPQCPHTPLDPAG
NGSKSLHSPDSNQELQALSRDPPLEQNASGTQLDEDAARAGIPLDVDVVGVPLEVDADGA
GIPLDMDADGVEIPLDVDASETGTPGDGDAAGILLDVDEGGTGIPLDEDADGAGIPLAMD
TDRAGIPDNADGAGIPLDMDTEGAGSPLDADATEHQCLTLEELGNYFQECIEIVEQLERE
RDSLIAELAQLREPALQEIRHAHEEIQAACRLLAKVELERDNLRDEIRQIKQKLFKVTKE
CVACQYQLESRRHDLSQHAAYQGELESQAGQLSGELSQLKETCEKEKEVLRQRLEAPPCR
QDNLYLQESRRLSVEFESFVAESRRGLEEHYEPQLLRLLERREAGARALQEMQGEIQGMK
EALRPLQGEVSRLRLQNRSLEEQIVLVKQKRDEEVGQYREQVEELEDRLKELKNGVQLQQ
RKNQELEELRTSLHRELSIYKSCLEIYGHLCKSEEKAEQDC
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcgcagagccggcagcgctgggctccaggggaggaagggacctgatggcacag
ccccagccccctccagagctgcagctggatgaagccagagcacccccagccccacaggga
gcagctgaaggaggtgctccacacccacagtgtcctcacaccccgttggatccagcaggg
aacggatccaaatcccttcacagcccagactccaaccaggagctgcaggctctcagcaga
gatcctcccttggagcaaaatgcatcggggacccagctggatgaggatgcagccagggct
gggatcccactggatgtggatgtggtgggagtcccgctggaggtggatgcagatggggca
ggaatcccactggacatggatgcagacggagtagagattccactggacgtggatgcaagt
gagacagggaccccaggagatggggatgcagcagggattctgctggatgtggatgaaggt
gggacagggatcccactggatgaggatgcagatggagcagggatcccactggccatggac
acagacagggcagggatcccagacaacgcagacggggcagggatcccgctggacatggac
acagagggagcaggcagccctctggatgctgatgccacagagcaccagtgcctgaccctg
gaagagctggggaattatttccaggagtgcatcgagatcgtggagcagctggagagggag
agggacagcctgatcgccgagctggcgcagctccgcgagccggcgctgcaggagatccgc
catgcccacgaggagatccaggcggcctgcaggctgctggccaaggtggagctggagagg
gacaacctgcgggatgagatccgccagatcaagcagaaactcttcaaggtgaccaaggaa
tgcgtggcctgccagtaccagctggagagccgccggcacgacctctcccagcacgccgcc
taccagggcgagctggagagccaggctgggcagctctcgggggaactgtcccagctgaag
gaaacctgcgagaaggagaaggaagttctgaggcagcgcctggaggctccgccctgccgg
caggacaacctgtacctccaggagagccgccggctttctgtggaattcgagagtttcgtg
gccgagagccggcgggggctggaggagcactacgagcctcagctgctgcggctgctggag
cggcgcgaggccggggccagggcgctgcaggagatgcagggagagatccagggcatgaag
gaagccctgaggcccttgcagggtgaggtcagcaggctgaggctgcagaaccgcagcctg
gaggagcagattgtcctggtcaagcagaaaagggatgaggaggtcgggcagtaccgggag
caggtggaggagctggaggacaggctgaaggagctcaagaacggggtgcagctccagcag
cgcaagaaccaggagctggaggagctcaggaccagcctccaccgggagctctccatctac
aagagctgcttagaaatctacggccacctctgcaaatctgaggaaaaagcagagcaggac
tgttaa
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