Ficedula albicollis (collared flycatcher): 101816063
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Entry
101816063 CDS
T02815
Symbol
SEC24C
Name
(RefSeq) SEC24 homolog C, COPII coat complex component
KO
K14007
protein transport protein SEC24
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101816063 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101816063 (SEC24C)
Membrane trafficking [BR:
fab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101816063 (SEC24C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
101816063
NCBI-ProteinID:
XP_016154789
UniProt:
U3JX89
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Position
6:complement(15698300..15739206)
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AA seq
1168 aa
AA seq
DB search
MSVNQQAHTGPPYGQPQPGYQGYQQPAYGGQSLPGVPQAQYGAYNGPMPGYQQPVPPQGY
FPSLGFPSKGSPVSLNSDTSSLAPNFIGSLRAPPTSGAPPPASGASHPSGPLAYSQFEHG
DVQNGIPASAAPVQRPPASQPFLPGSAPTPVIQQYGAPPASVQQLRNHMAGMTIGSTAAS
APPPAGLGYASVPPVSGSFSATGSGLYTPYSASQGPPLTSVSQGLPLAQPPLPAQTISTQ
RPPTQVPGFTPPPPSTGVGPSSYPPTTGAPRPPAMPGPPLPGQTVAAPPSSQPNHVSSPP
PPSTMAGLHPGPPMSGLHGPPPPTHPPQPGYPMQQNGSFGQMRGPQPNYGGAYPGAPNYG
SPPGPPPPPKRLDPDSIPSPQLNELPPQQKPRHRIDPDAIPSPIQVIEDDRNNRGSEPFV
TGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQSQVPLAAVIKPLATLP
PEETLPYLVDHGESGPVRCNRCKAYMCPFMQFIEGGRRFQCCFCSCVTEVPPHYFQHLDH
TGKRVDFYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAVKSGLVRLICEE
LKSLLDYLPREGNMEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDG
FLVNVNESRTVIASLLDQIPEMFADTRETETVFAPVIQAGLEALKAAECAGKLFIFHTSL
PIAEAPGKLKNRDDRKLINTDKEKTLFQPQTSFYNNLAKDCVAQGCCVDLFLFPNQYLDV
ATLGVVPYQTGGSIYKYAYFQLETDQYRFLNDLRRDVQKEVGFDAVMRVRTSTGIRATDF
FGAFYMSNTTDVEMAGLDCDKTITVEFKHDDKLSEDSGALLQCALLYTSCAGQRRLRIHN
LSLNCCTQLADLYRNCETDTLINYLAKFAYRGVLSSPVKTVRDALINQCAQILACYRKNC
ASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGPEVTTDDRAYIRQLVTSMDVAETNVF
FYPRLLPLTKADVDSDSLPAAIRNSEERLSKGDIYLLENGLNIFVWVGVSVQQGLIQNLF
GVSSFSQISNALSTLPVLENPFSKKVRSIVDMLQGQRSRYMKLIVVKQEDKLEMLFKHFL
VEDKSLTGGASYVDFLCHMHKEIRQLLS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaaccagcaagctcacacggggcctccttacgggcaacctcagcctggctat
caggggtaccagcagcctgcctacggaggacagtcactgccaggggttcctcaggcgcag
tacggagcttacaatgggccaatgccaggataccaacagccagtccctccacaaggttac
tttccttccttggggtttccttcgaagggctctcctgtatctctcaactctgacacttct
tctcttgcacctaatttcataggttcattaagagccccgccaacatctggagctcctcct
ccagcctctggagcatctcatccttctggccccttggcatacagtcaatttgaacatgga
gatgtgcagaatggaattccagcctcagcagccccagtgcagaggccacctgcttctcag
ccgtttctgccaggctcagcacccacgcctgtcatccagcaatatggggcccccccagcc
agcgtgcagcagctcaggaatcacatggcagggatgacaattggcagtactgcagcctct
gctcctcccccagctggactgggctatgcatcggttcctccagtctcaggaagctttagt
gcaacaggatctggtctctacacaccttacagtgcaagccaaggaccccctcttaccagt
gtgtctcagggtcttcctttggcacagcctccgcttcctgctcagacaatatcaactcag
cgcccacctactcaagttcctggttttaccccacctcctccttctacaggggttggacct
tcctcttaccctcctaccacaggcgctccaaggccacctgccatgccaggcccaccactg
cctgggcagacagttgctgcaccaccatcatcccagcctaatcatgtatcctcaccacca
cctccatcaactatggcggggctgcaccctgggcctcccatgagtggtctccacggacca
cctcctcccactcatcctcctcagccaggatacccaatgcagcagaatggttcctttggg
cagatgaggggtccccagccaaactatggaggagcctatccaggagcaccaaattatgga
agcccgcctggaccaccacctccaccaaaacgcttggatccagattccattcctagccct
caacttaatgagctgccaccccagcagaaacccaggcacagaatagacccagatgcaatt
cctagtccaattcaagtgattgaagatgacagaaataaccgtgggtcagaaccatttgtc
actggagtgagagggcaggtcccacctcttgttactacaaatttcttggtcaaggatcaa
ggaaatgcaagcccccgctacatcagatgcacatcttacaatattccctgcacctctgac
atggccaaacaatcccaagttcccctggctgccgtcataaagccgctggctactctgccg
ccggaggagacccttccttatttggtagaccatggagaatctgggcctgtccgatgtaat
aggtgcaaagcttacatgtgcccttttatgcaattcattgaaggtggaaggaggttccag
tgttgtttctgcagctgtgtcactgaggtgccacctcactacttccaacatttggatcat
actggaaagcgagtagatttctatgaccgacctgagttatcactggggtcgtatgagttt
ctagcaacagttgactattgcaagaataacaagtttcctagtccacctgctttcattttt
atgattgatgtgtcttacaatgctgtgaagagtggcttagtgaggctaatatgtgaagaa
ttaaagtcactcctagattatctgcccagggaagggaacatggaggaatcagctattcga
gtcggctttgtcacctacaacaaagtgttgcacttctataacgtgaagagctcgctggca
cagccacagatgatggtggtctcagatgtggcagacatgtttgtgccactccttgatggt
tttctggtgaatgtgaatgagtccaggacagttattgccagtttgctggatcagattcca
gaaatgtttgcagacacaagagaaacagaaactgtttttgcacctgtgattcaagcaggg
ctggaggcactgaaggcagctgagtgtgctggcaagctcttcattttccacacttctctg
cccattgcagaggctccagggaagttaaagaacagggatgataggaagctgatcaacaca
gataaggagaagactttgtttcaaccacagacgagcttttacaacaacttggccaaggac
tgtgtggcccagggctgctgtgtggatctattcctgtttccaaaccagtatttggatgtg
gccacactgggtgtggtaccttaccagacgggaggctccatttataagtatgcgtatttc
cagctggagacagaccagtacaggttcctgaatgacttgagaagggatgtccagaaagaa
gtgggatttgatgctgtaatgagagtgcgcacaagcacaggtattcgagcaactgacttt
tttggagctttctatatgagcaatacaactgatgtagagatggcaggtctggactgtgat
aaaacaatcacagtagaattcaagcatgatgacaaattgagtgaagacagtggtgcattg
cttcagtgtgctctgctttatacaagttgtgcaggacagcgacgactccgcattcacaac
ctctccttaaactgctgcacacagctcgctgacctctatcggaactgtgagactgacacc
ctcatcaactacttggctaagtttgcatatcgtggggtcctgagtagtccagtgaagact
gtacgagatgcactgatcaaccagtgtgcccagatcctagcctgctatcgaaagaactgt
gctagtccctcttctgctggccagctcatcctccccgaatgcatgaagctgcttcctgtg
tacttgaactgtgtgttgaagagtgatgtacttcagcctggcccagaggtcacaacagat
gaccgtgcctatatccgtcagttagtgacatccatggatgtggctgaaacaaatgttttc
ttttatcccagacttttgcccctgaccaaagcagatgttgacagtgattccttgccagca
gccattcgcaactccgaggagcgtctttccaagggggacatctacctgctggagaacggg
ctgaacatctttgtgtgggtgggagtcagcgtgcagcagggcctgatccagaacctcttc
ggagtgtcatccttcagtcaaattagcaatgccttgagtaccctgccagtcttggaaaac
cccttttcaaagaaagtgcgatctattgttgatatgcttcaagggcagagatcacgctac
atgaagttgatagttgtgaagcaagaagataagctggaaatgctgttcaaacactttcta
gtggaggacaagagcctgactgggggggcttcatatgtggacttcctgtgtcacatgcac
aaggagattcggcagctactgagctag
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