Ficedula albicollis (collared flycatcher): 101816171
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Entry
101816171 CDS
T02815
Symbol
SRBD1
Name
(RefSeq) S1 RNA binding domain 1
Organism
fab
Ficedula albicollis (collared flycatcher)
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_N
Tex_central_region
S1
HHH_9
HHH_7
YqgF
HHH_6
S1_RRP5
HHH
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
101816171
NCBI-ProteinID:
XP_005043225
UniProt:
U3KET0
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All DBs
Position
3:26964269..27088999
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AA seq
969 aa
AA seq
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MSSQPRRVKSVAKASTSAELPSFLNSTSESEEEEEEEWEPKSKIARRPHLPKKTEAKTKK
AAAPRSTVARKMVKKVAIKEEMDVSLPIAPVEDKKMQLLKPKEENEDIKPKSLNRMPEVP
KKMEINSFQGQNRNSLASNEKPSTSVPVVKQEKCEEQFAFDEPPSKKIKLNACPEGKPVK
NLGGNKIKEEFEMNWDIVQALSEVTNVEPWVCANLLRLFQEENTIPFIARYRKELINNLE
ADALREVQHALEELRTVARKTHTMIQKLKKEGKLSNSLLKELLNCRTLEELDHVSAPYKT
GSKGTKAQRAKQLGLEPAALSLLQNPVELNLFSYIRPNTKGLANIQEVEAGVQHILADIF
AKDKDTLDFIRKLCQQRYISIQSTLAKVSSKNGNEKDIDKFQLYHEFSCNIKNIQHHQIL
AINRGENLKILTVKVNIPDGVKNEFCWWCVNERWKPKQFLKPEFMRLFRSSVEDAYKRLI
YPLLCREFRSKLTSDAEKESVMMFGRNLRQLLLTSPVRGRALMGVDPGYKHGCKLAIISP
TSQILHTDVVYLHSGQGFREAEKIKRLLLQHDCSTVVIGNGTACRETEAYFADLIMKKYF
APLDVVYCIANEAGASIYSVSPEASKEMPDLDPNLRSAVSIARRVQDPLAELVKIEPKHL
GVGMYQHDISQTLLKATLDSVVEECVSFVGVDINICSEILLRHIAGLNTNRAKSIIEWRE
KNGPFINREQLKEVKGLGPKTFQQCAGFIRFNQEYIKTFCSNKKNELGSGALLTKAGTLG
KKKSKLTSCVSQQPNPLDQTCIHPESYNIAMRFLSLIGGNAKDIGKSDMQQKVNVVIEKE
GLEGTAKRLNTTVHTLQLIIDGLTQPEGYDIRTDFDKPDFKRSIVCFEDLSAGAVLTGKV
ENATPFGVFVDIGVGKSGLIPVRSITEAKLSKVKKRRSLGLGPGERVEVKVLNVDIPRLR
ITLDLIRVL
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaaccaaggagggtgaaatctgtagccaaagcctctacatcagcagaactt
ccttcatttcttaattcgacgtctgaatcagaggaggaagaggaggaggaatgggagcca
aaaagcaaaattgccaggagacctcatttgccaaagaaaactgaggcaaaaactaaaaaa
gctgctgctccacggtcaactgtggccaggaaaatggtcaagaaggtagcaataaaagag
gaaatggatgtatccttgcctattgcacctgtagaagataaaaaaatgcagcttctaaaa
cctaaggaagaaaatgaagacattaaaccaaaaagtttaaatcgaatgccagaagtgcct
aagaaaatggaaataaattcattccaagggcaaaaccggaacagtttagcgagtaatgaa
aaaccctcaacgagtgttcctgtagtgaaacaagagaaatgtgaggagcagtttgcattt
gatgaaccaccctctaaaaagattaagctgaatgcgtgtcctgagggaaagccagttaaa
aatctgggaggcaacaaaataaaagaagaatttgaaatgaactgggatattgtacaggcc
ttgtcagaagtaacaaatgttgaaccatgggtatgtgcaaacttacttcggctctttcaa
gaagaaaacacgattccttttattgctcggtaccgaaaagagctcatcaataacctggag
gccgatgccttgcgagaagtgcagcacgcattggaagagctacgtactgttgcaaggaag
acacatacgatgatacagaagttgaagaaagaaggaaagttatccaattcccttttaaaa
gaactgctaaattgcagaactttggaagaactagaccatgtgtctgcgccttataaaact
gggagtaaaggcaccaaagcccagagggccaagcagttgggattagaacctgctgctctc
tcactcctgcaaaatcctgtggaactcaatctcttttcttacattagacccaataccaaa
gggcttgcaaatatccaggaagtagaggctggagtgcagcatattttagcagacatcttt
gctaaagataaagatacactggattttatcaggaaattgtgccagcaaaggtacatttcc
atccagtcaacactggcaaaagtgtcatccaaaaatggaaatgaaaaagatattgataaa
ttccaactgtaccatgagttttcttgtaatataaagaatattcaacatcatcagattctg
gccattaaccgaggggaaaatctgaagatcctgacagtgaaggtcaacattcctgacggg
gtgaagaatgaattctgctggtggtgtgtcaatgaaagatggaagccaaaacaattttta
aaaccggaatttatgaggctgttccggagttctgtagaggatgcatataaacgccttata
tatcctcttctctgtagggaattcagatccaagttgacatctgatgcagagaaagagtct
gtgatgatgtttgggagaaatctccgtcagctgcttctgaccagccctgtgaggggccgt
gctttaatgggagtggatcctggctacaagcatggctgcaagttggcaattatttcacca
accagtcagatactccatactgatgtagtttacttgcattctggtcaaggatttcgtgaa
gctgagaagataaagaggcttctgctacagcacgactgcagcactgttgtgattggcaat
ggcacggcctgcagagaaacagaagcttactttgctgacttaattatgaagaaatatttt
gcaccactggatgttgtttactgcattgccaatgaagcaggagcatcaatctacagtgtc
agtccagaagcgtccaaggaaatgccagacctagaccccaatctaagaagtgcagtttcc
atagctagacgtgtccaagacccattagctgagctggtgaaaattgagcccaaacaccta
ggagttggaatgtatcagcatgatatatcacagactttgctcaaagcaactctggacagc
gtggttgaagagtgtgtcagctttgtaggagttgatattaacatctgctcagaaatacta
ttaagacacattgcaggactgaatactaacagagctaaaagtataattgaatggcgagag
aagaacggaccatttataaaccgagaacagctcaaagaagttaaaggtttgggtcctaaa
accttccaacaatgtgctggcttcatcagattcaatcaagaatatataaagactttttgc
agtaataagaaaaatgaacttggaagtggtgcacttttgactaaagcaggtacactgggt
aaaaagaagagtaaactaacatcatgtgtctcacagcagcccaatcctttggaccaaact
tgtattcatccagagtcttacaacattgcgatgaggtttttatctctcattggaggaaat
gcaaaagacataggaaaatcagatatgcagcaaaaagtaaatgtggtaattgaaaaggaa
ggactggaaggcacagccaaaaggctcaataccactgtgcacacactgcagctgatcatt
gatggtctcactcagcctgaaggctacgacatccgaacagactttgataaacctgacttc
aaaagaagcatagtctgctttgaagacttaagcgctggtgctgttttgactggaaaagtt
gaaaatgcgacaccatttggagtttttgttgatattggtgtgggaaaatccggtttgatt
ccagtgcggagcataacagaagcaaaactctctaaagtgaagaagagaagaagcctgggc
ctaggtcctggagaaagagtggaagttaaagtacttaatgttgatattcctcgactgagg
ataacattggatcttattcgtgttttatga
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