Ficedula albicollis (collared flycatcher): 101816196
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Entry
101816196 CDS
T02815
Symbol
LRRC7
Name
(RefSeq) leucine rich repeat containing 7
KO
K24055
leucine-rich repeat-containing protein 7
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
fab04990
]
101816196 (LRRC7)
Domain-containing proteins not elsewhere classified [BR:
fab04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
101816196 (LRRC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_2
LRR_13
PDZ_6
LRR_5
LRR_EndoS
LRR_NXF1-5
LRR_Zer-1
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
101816196
NCBI-ProteinID:
XP_016155816
UniProt:
U3JET1
LinkDB
All DBs
Position
8:complement(31135989..31239689)
Genome browser
AA seq
1493 aa
AA seq
DB search
MTTMWELGQVKNGAPGAALHQSCYFGGTDSAPAVCCLEMTSKRKIIGRLVPCRCFRGEEE
IVSVLDYSHCGLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLS
SLPTSIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQ
LYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSELPEV
LEQIQNLKELWMDNNSLQVLPGSIGKLKQLVYLDVSKNRIETVDLDISGCEGLEDLLLSS
NMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLH
NLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKN
LPFTFTKLKELAALWLSDNQSKALIPLQTEAHPETKQRVLTNYMFPQQPRSDEDFQSDSD
SFNPTLWEEQRQQRMTVAFEFEDKKEEEENPGKVKVEINLKRYPTPYPEDLKNMVKSVQN
LVSKPSLGVRPENSAPAANSDPTGKDKYEHKWPLTPKEISVEDAFGHPGSEMRIGELRPS
MPETPLYPPKLVLLGKDKKESTDESEADKIHCLNNSVSSGTYSDYSPSQASSGSSNAHVK
MGSLQTTAKEAVNNSLWGNRLAQSFPQPLETKPLLSQREAAPAGSVPARPERRPLSDAFA
DSWNDGSHYDNTGFVAEESAAENASTNPLLSTKSRSSSAHGRRPLIRQDRIVGIPLELEQ
PALRNTHDSEVPPPNPWQNWTRTPSPFEDRTAFPSKLESTPNTSPLPERKDHVKESPEMT
STFTPGIPWEYHDSNANRSLTNVFSHMHCRPDPSKNVISISKSTERLSPMMRDLKTNKFK
KSQSIDEIDIGAYKVYNIPLENYASGNDTVGPHERVDKLLGPEHGVLSMSRSQSVPMLDD
ELLTYGSVKVQPQHKASVTKKVYQFDQSFNPQGAVELPADKRLLPPFQLNAEYLPQPAKS
LPQELVSPRGYRGYAPVEPMFSFSQPSVSEEPAAAPFPGPAARPGFLRRADSLVSSAEMS
VFRRVGEPQELPPADRYGRAPFRGAPERQGGMAVPEAQFLKRNGRYEDEHPSYQEVKAQT
GSFPVKNLTQRRPLSARSYSTESYGTAQTRPVSARPTMAALLEKIPSDYNLGNYGDKPSD
SSDIKPRPAPGKGNESCAKMPADWRQQLLRHIEARRLDRSAAYKHHTVSLGMLHSGGVSA
MHAGRSMTLNLQPKSKFENQMLQELPLPKTPSQQSSLLDNGQDEVAVGSPWTPYPLGRRD
VPPDTVTKKAGSHIQTLMGSQSLQHRSREQQYEGSMNKVTIQQYQPPLPIQIPASQSSRA
PQPQRCLIQTKGQRSTDAYQEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDKGIFVTRV
QPDGPASSLLQPGDKILQANGHSFVHLEHEKAVLLLKSFQNTVDLVIQRELTV
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccatgtgggaacttggacaagtgaaaaatggagctccaggagctgccttgcat
cagagctgctattttggggggacagattcagcaccagcagtatgctgcttggagatgaca
agcaaaaggaagatcatcgggcgcctggtgccgtgccggtgtttccgcggcgaggaggag
atcgtctccgtgctggactattcccactgcggcctgcagcaggtgcccaaggaggttttc
aactttgagaggaccctggaggagctttacctcgatgccaaccagattgaggagcttccc
aagcaactgttcaactgccaggccctgaggaagctgagcattcctgacaacgacctgtcc
agcctgcccacctccatcgccagcctggtcaacctccgcgagctcgacatcagcaagaac
gggatccaagatttcccagaaaacattaagtgttgtaagtgcttaacgataatcgaagcc
agcgtcaaccccgtgtccaagctgccagatggcttcacacaacttctaaatctgacccag
ctctatctgaacgatgcctttctggagtttctcccagctaactttggaagacttgtcaaa
ttgcgaattttggagttaagagaaaaccacttgaaaactctaccaaagtcaatgcacaaa
ctgacccagctggagaggctcgacctgggcaataatgagttctctgagctgcccgaggtt
ctcgaacaaatccagaacctaaaggagttgtggatggacaataattccttgcaagtgcta
cctgggtctatagggaagttaaaacagctcgtgtacctggatgtgtccaaaaacaggatc
gagaccgtggacctggacatctcgggctgtgaggggctggaggatctcctcctctcctcc
aacatgctgcagcagctgccagactccataggattgttgaagagactgacaactctgaaa
gtggacgacaaccagctcacaatcctgcccaatgccattggaaacttgtccctgctggag
gaattcgactgcagctgcaacgagctggagtcgctgccctccaccatcgggtacctgcac
aacctgcgcaccctggccgtggacgagaacttcctcccggagctgcccagagagattggg
agctgtaagaacgtgactgtgatgtccctgcgctccaacaaactggaatttcttcctgat
gagattggccagatgcagaagctgagggtgttaaatctgagtgataacagactgaagaat
ttgcccttcacgttcaccaaactcaaagaactggcagccctgtggctttctgacaaccag
tccaaggctctgatcccgctgcagacggaggcgcatcccgagaccaagcagcgagtgctc
accaactacatgttcccccagcagccccgcagcgacgaagatttccagtcagacagtgac
agctttaaccccactctgtgggaggagcagaggcagcagagaatgactgtggcctttgaa
ttcgaagacaagaaggaagaggaggaaaatccagggaaagtcaaggttgagatcaacctc
aagcgctaccccactccctaccccgaggatttgaagaacatggtgaaatctgtgcagaac
ctggtgagcaaacccagcctgggagtgcgccccgaaaactcggccccggccgccaacagt
gaccccacgggcaaggacaagtacgagcacaagtggcccctgacccccaaggagatctca
gtggaggatgcctttggacatcctggcagtgagatgaggataggggagctccgtccttcc
atgcccgagacgccgctgtacccccccaaactcgtcctgctgggtaaagacaagaaagag
tcgacagatgagtctgaagcagataagatccattgtctgaataacagcgtttcctcaggc
acttactcagactattccccttcccaggcttcctcagggtcctccaacgcgcacgtaaaa
atgggctccctgcagaccacggctaaagaagcagtgaataactctttgtgggggaacagg
ctggcccagtcgttcccacagcccctggagaccaagccattgctgagccagcgggaagcg
gctccggccgggagcgtcccggcgcgcccggagcggcgcccgctgagcgacgccttcgcc
gacagctggaacgacggctcccactacgacaacacgggattcgtggccgaggagagcgcg
gccgagaacgccagcaccaaccccctgctgagcaccaaatccaggagctcctccgcgcac
gggcgccggccgctgatccggcaggacaggatcgtggggatccccctggagctggagcag
cccgcgctcagaaacacacacgactctgaagtgcctcctcccaatccttggcaaaattgg
accagaacccccagtccttttgaagacaggacagcttttccttccaaactggaaagcacc
cccaacaccagccctttgcccgagcggaaagatcacgtcaaggagtctcccgaaatgacg
agcactttcactccaggaattccgtgggaatatcatgactccaacgctaacaggagcctc
acaaacgtcttctcccatatgcactgtcgcccagacccttccaaaaacgtcatctccatc
agcaagagcacggagcggctctccccgatgatgagggatttaaaaacgaacaagtttaag
aagtcgcagagcatcgacgagatcgacatcggtgcgtacaaggtgtacaacatccccctg
gaaaactatgcatccgggaacgacaccgtgggcccccacgagagggtggacaagctgctg
ggcccggagcacggcgtgctcagcatgtcccgcagccagtccgtgcccatgctggacgac
gagctgctgacctacggcagcgtcaaggtgcagccgcagcacaaggcgtcggtcaccaag
aaggtttatcagttcgaccaaagcttcaacccccagggcgccgtggagctgccggccgac
aagcggctcctgccgcccttccagctcaacgccgagtacctgccccagccggccaagagc
ctgccccaggagctggtgagcccacggggctaccgcggctacgcgcccgtggagcccatg
ttctccttctcgcagccctcggtcagcgaggagccggcggccgcccccttccccggcccg
gccgcgcggcccggcttcctgcgcagggcggattctctggtcagctcggcggagatgtcc
gtgttccgcagggtgggcgagccccaggagctgcccccggcggacaggtacggccgggcc
ccgttccgcggcgccccggagcgccagggcggcatggccgtgcccgaggcccagttcctc
aagcgcaacgggcgctacgaagacgagcacccttcctaccaggaagtgaaagcccagact
gggagcttcccagttaaaaacctcacgcaaaggaggcccctgtcggcacgaagctacagc
acagagagctacggcacggcccaaacgcggccggtctcagcgaggcccaccatggcagct
ctgctggaaaagattccgtcagactataacttgggtaactatggcgacaagccttccgat
agcagtgatataaagccgaggcctgcccctgggaagggaaatgagagctgtgctaaaatg
cccgctgactggagacaacagctacttagacatatagaagctagaaggttagacaggagc
gctgcttacaaacaccacacagttagccttggcatgctgcactctggaggggtttcagcc
atgcatgccggccgaagcatgactttaaacttgcagcctaaatctaaatttgaaaaccaa
atgcttcaagagctacctctaccgaaaaccccgtcgcagcagagcagcctcctggacaac
gggcaggacgaggtggccgtgggcagcccctggaccccgtacccgctgggcaggcgggac
gtgccccccgacaccgtcaccaagaaggcaggcagccacatccagacgctgatggggtcg
cagagcctgcagcaccgcagccgggagcagcagtacgagggcagcatgaacaaggtcacc
atccagcagtaccagccccccctgcccatccagatcccggcctcccagagctcccgggcc
ccccagccccagcgctgcctcatccagaccaagggccagcgcagcaccgacgcctaccag
gagcagttttgtgtgaggatagagaagaatcctggccttgggtttagtatcagtggtgga
ataagtggacaaggaaatccattcaaaccttctgataagggtatctttgttactagggtt
cagcctgacggccccgcctccagcctgctccagcccggagacaaaatcctccaggccaat
ggacacagctttgtacacctggaacacgagaaggctgtgctcctactgaagagtttccag
aacacagtagacttagttatccaacgtgagcttactgtctaa
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