Ficedula albicollis (collared flycatcher): 101816278
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Entry
101816278 CDS
T02815
Symbol
CLSTN1
Name
(RefSeq) calsyntenin 1
KO
K22659
calsyntenin 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101816278 (CLSTN1)
Cell adhesion molecules [BR:
fab04515
]
Cadherins
Cadherin related
101816278 (CLSTN1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Toxin_R_bind_N
Glyco_hydro_16
EphA2_TM
PFF1_TM
V_ATPase_I
Cadherin_C_2
SID-1_RNA_chan
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
101816278
NCBI-ProteinID:
XP_005057930
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Position
21:complement(7427446..7457402)
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AA seq
981 aa
AA seq
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MAVPQCPQRRGRSAPQPAGVRNGLSRSPPPRAVVNKHKPWIETTYHGIVTENDNTVLLDP
PLIALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLD
CELQKDYTFTIQAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKDKSYKATVIEGK
RYDSILKVEAVDADCSPQFSQICSYEILTPDVPFVIDKDGYIKNTEKLSYGKEHQYKLTV
TAYDCGKKRAAEDVLVKISIKPTCKPGWQGWSKRIEYEPGTGSLALFPGMHLETCDEPIT
SVEATVELETSHIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTVGLPTDNGH
DSDQVFEFNGTQAVKVPDGLVTVSLKEPFMISVWMRHGPGTKEKETILCNSDKTEMNRHH
YSLYVHNCRLVFLLRQEPAPGKSFQPAEFHWKLSQVCDKEWHHYVVNVEFPAVSLYVDGV
SYDPFPVTEDYPLHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELHMAQFFRGNL
AGLMIRSGKLENKKVIDCLYTCKEGLDLQMPDGVGKGVKIHMNPSQSVLSIEGDDIARVD
RAMQHISYLNSRQFPTPGIRRLKVSSTVRCFNEEPCVSIPSVEGYVMVLQPEEPKISLSG
INHFARSASEFESSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDM
CEVTVLGEELNQEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMANYEEVLHLIRYRN
WRTASLFDRKFKLLCSELNGRYVSNEFRVEVNVIHTASPVEHANHIAAQPQFIHPVHHSF
VDLSGHNLANPHPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRSIRDQDTGKES
EMDWDDSALTITVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQE
EDQQNVNRQQQLEWDDSTLSY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccgcagtgccctcagcgccgggggcggagcgcgccacagcccgcgggggtc
cgcaatgggctctcccggtcccccccaccccgcgccgttgttaacaagcataagccatgg
attgaaacaacctaccatggcatagttacagaaaatgacaacacggtgctcttggatccc
cctttaatagccctggacaaagatgcacctctgcgttttgcagagagttttgaggtgaca
gtcaccaaagaaggtgagatctgtggatttaaaatccacgggcagaatgttccctttgaa
gcagtggtggtggataaatccactggtgagggaataatccgctcgaaggagaagctggac
tgtgagctgcagaaggattacaccttcaccatccaggcctatgactgtggcaagggacca
gatggagcaaatgccaaaaaatcccacaaggccacagtgcacatccaggtgaacgacgtg
aacgagtacgcgcccgtgttcaaggacaagtcctacaaggccacggtcatcgagggcaag
cggtacgacagcatcctcaaggtggaggctgtggatgcagactgctccccccagttcagc
cagatctgcagctacgagattctcactccagatgtgccctttgtcatcgacaaggacggt
tatataaaaaacacagaaaagttaagctatggtaaagaacaccagtataaactgacagtc
acagcctatgactgtgggaagaagagagctgctgaggatgtgttggttaaaattagcatt
aagcctacgtgcaagcctggctggcaaggttggagcaaaagaatagaatatgagcctggc
actggttctttggctctgttccctgggatgcatttggagacatgtgatgagccaataacc
tcagttgaagcaacggtggaactagaaaccagccatattggaaaaggctgtgatagagac
acctactctgagaaatccatccacaggctctgtggtgctgcctctggcacggctgagctg
ctgccccctcccagcagtgctgctaactggactgtggggctgcccacggacaacggccac
gacagcgaccaggtcttcgagttcaacggcacccaggctgtgaaggttccagatgggctt
gtcacagtcagtctgaaagagcccttcatgatctctgtgtggatgaggcacgggcctgga
accaaagagaaagagacaattctgtgcaattcagacaagacagagatgaaccggcaccac
tacagcctgtacgtgcacaactgccgcctggtgttcctgctgcgccaggagcccgcgccg
gggaagagcttccagcccgccgagttccactggaaactcagccaggtgtgtgacaaagag
tggcaccactacgtcgtgaacgttgaatttcctgcagtgtctctttacgtggatggtgtt
tcctatgatcctttcccagtcactgaggattacccactgcacccttccaagatagaaaca
cagctggtggtaggagcatgttggcaagaatatacaggaaatgaaaatgacaatgaaact
gtgcccgagacctctgcaggtggtgaactgcacatggctcagttcttccgaggcaatctg
gcagggctgatgattcgttctggaaaactggagaacaagaaggtcattgattgcctctac
acctgcaaggaggggctggatttgcagatgcctgatggtgttggcaaaggtgtgaagatc
cacatgaacccgagccagtcggtgctgagcatagagggggatgacatagccagggttgac
agggccatgcagcacatctcctacctgaactcccgccagttccccacgcctggcatccgc
aggctgaaggtctccagcactgtcaggtgtttcaacgaagagccctgtgtgtccattccg
tctgtggagggctatgtcatggtcctgcagccagaggaaccaaaaatcagcctcagtggc
atcaaccactttgcccgctctgcctccgagttcgagagctcggagggcgtgtccctgttc
ccggagctgcgcatcatcagcaccatcacccgggaggtggagccagagggggatggggac
gaggatcccacagtccaagagtctttggtatctgaagagatcatgcacaacctggatatg
tgtgaggtgacagtgctgggagaggagctaaatcaggaacaggagagcctggagattgac
atgacacgattgcagcagaaaggcattgagatgagcagttccaacctgggcatgataatc
acaggggtggacaccatggccaactacgaggaggttctgcacctgatccgctacaggaac
tggcgcacggcgtccctgttcgacaggaagttcaaactgctctgctccgagctcaacggg
cgctacgtcagcaacgagttcagggtggaggtgaatgttatccacacagccagcccagtg
gaacatgccaatcacattgctgcccagccgcaattcatccacccagtgcatcattccttt
gttgatctctctggtcacaacttggcaaaccctcatcccttttcagttgtccccagcaca
gccacggtggtgatcgtggtgtgtgtcagcttcctggtgttcatgatcatcctgggcgtg
ttccgcatccgcgccgcgcaccagaggagcatcagggaccaggacacgggcaaggagagc
gagatggactgggacgactctgccttgaccatcactgtcaaccccatggagacttatgag
gatcaacacagcagtgaagaggaggaggaggaggaggaagaagaaagtgaagatggagaa
gaagatgacatcaccagtgcagagtctgaaagcagtgaggaggaagagggagagcaggag
gaggaccaacagaatgttaacagacagcagcagctggaatgggatgactctaccctcagt
tattga
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