Ficedula albicollis (collared flycatcher): 101816341
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Entry
101816341 CDS
T02815
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101816341 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101816341 (SMARCD1)
03036 Chromosome and associated proteins [BR:
fab03036
]
101816341 (SMARCD1)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101816341 (SMARCD1)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101816341 (SMARCD1)
PBAF complex
101816341 (SMARCD1)
GBAF(ncBAF) complex
101816341 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
101816341
NCBI-ProteinID:
XP_005062151
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Position
Un
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AA seq
418 aa
AA seq
DB search
PARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKL
DQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLE
DSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGD
VNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFV
ICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVD
DTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQ
SQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
cccgctcgcaagcggccggcgccgcagcagctccagcaggtgcagccgcaggcggtgccc
aaccgcaaccacaatgccaagaagaagaagatggcagataaaatcctcccgcagcggatc
cgggagctggtgcctgagtcccaggcctacatggatttgttggcctttgagaggaagctg
gaccagaccatcatgaggaagcgcttggatatccaggaggctctgaaacgccccatcaag
caaaagcgaaagctgcggatttttatctccaacaccttcaacccagccaagtcggacgcg
gaggacggagaaggaaccgtcgcctcctgggagctgcgggtggaaggacggctgctggag
gattctgctctgtccaaatatgatgccaccaagcagaaaaggaaattttcgtccttcttt
aaatctctggtcattgaacttgataaagacctgtatggccctgacaatcacctagtagag
tggcacaggactgctacgactcaggagacagatgggttccaggtgaagaggccgggggat
gtcaacgtgcgctgcactgtcctgctgatgctggattaccagcctccccagttcaaactg
gatccacgcctggctcggctcctgggcatccacacccagacccggcccgtgatcatccag
gccctgtggcagtacatcaagacccacaagctgcaggacccccacgagcgggagtttgtc
atctgtgacaagtacctgcagcagatattcgagtcgcagcggatgaagttctctgaaatc
ccacaaaggcttcacgccttgctgatgcccccagagcccatcatcatcaatcatgtgatc
agtgttgacccaaatgaccagaagaaaacagcctgctatgacattgatgtggaggtggac
gataccctgaaaactcagatgaattcctttctgctctccacagccagtcaacaggaaatt
gctgctctggataacaagatccacgaaacaattgagaccatcaaccagctgaagacacag
cgtgagttcatgctgagctttgcccgagatcctcagggcttcatcaacgactggctccag
tcccagtgccgggatttgaagacaatgactgatgtggttgggaatcccgaggaggagcgc
agagccgagttctacttccagccgtgggcgcaggaagccgtgtgccggtacttctactcc
aaggtgcagcagagacgacaggagctggagcaggccctggggatccggaacacataa
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