Ficedula albicollis (collared flycatcher): 101816350
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Entry
101816350 CDS
T02815
Symbol
PEX1
Name
(RefSeq) peroxisomal biogenesis factor 1
KO
K13338
peroxin-1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101816350 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101816350 (PEX1)
Membrane trafficking [BR:
fab04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
101816350 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_5
nSTAND3
RuvB_N
AAA_14
RNA_helicase
TIP49
DUF815
AAA_28
AAA_2
AAA_29
AAA_7
Molydop_binding
ATPase
APS_kinase
Motif
Other DBs
NCBI-GeneID:
101816350
NCBI-ProteinID:
XP_005041158
LinkDB
All DBs
Position
2:complement(24407068..24433237)
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AA seq
1288 aa
AA seq
DB search
MWGCGDPGGAAAATVVLSGTRDCFLHLPPALASLLRLQQGQAVKISCGHQPIFLSWMETR
HRGHQGENIAEINRHLAEKLGITDGEQVFLEPCSHVSSCQQVEVEPLTADDWEILELHAS
SLERHLLDQIRVVFPRAIFPVWVEQHTHVYIRIGTLVPAAPYGRLEPCTELLVCPKTHGP
EENITSTPATERDVLLKNFVKNNMEQEETLKDPFAKQPYLKSGVLEQSKVDANMMFGSNV
LPNIWNFIGNIFSNTSEPKQKTSCDNNEMSTFKDKLLNLIHMDSIFRVCQSQPPSVQNVS
SSHEFLKCSAVHIFPWNLEYIDLDPNPVVSYGKINELLSPRQRHQEAKQNLPLEKQNHLT
STQDKSPSNSNSGQASSEGSVVRIVWNGFEDLKSVIEYGHDGEALHVGRVWIADGLRKKL
HIEMHSTVRIKSVESIPKIPVSLTLQPKQNLHKDIQEDDVKCAFSSWLQDSTTDDHPWIM
TSTDCVHLSVKEGMEEFVLSAAHPVRTEENKSENIFILSPSLLQKTNIQVLLHPLSRKAD
DDNQAPMPDRDKSLPYNKLSDLGGVDKLGTSLFEHISHSLLGRPLSQKLAANAVGLRSGG
VLLTGGKGSGRSTLAKAICKEAFTRLDAHVEVIDCKALRGKRLVNVRKRVEEAFLEAAWR
QPSIILMDDLDHIVGVPSTPEHENSPETVESNRLSYVLKDLMKEVISMGSLIALIATSQS
EHSLHPSLVSAQGTHLFQCFKCIPSPDQKQRYEMLYSIIKKKLNYDLKDFSDLDLQCIAK
ETEGFVARDFTMLVDRAIHTCASNQNASDNGADLNLSTVDFQKALKDFTPLALRNVSLHK
PKDLGWDRIGGLKDVKQMLKDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGV
VARESGMNFISIKGPELLSKYIGASEQSVRDIFNRAQAAKPCIVFFDEFDSIAPRRGHDN
TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQNSR
YEILKALSHSLSLANDVDFQDLAAKTEQFTGADLKALLYNAQLEAVHTNLNLTQDFGSSS
DSDFSLSSMVFLNHSNGSDDSAIDGEAGLEHSLTSLDMSDLLPEDPRSNMYRLYFGSSYE
SELGNGTPSELSSLCLSGPNSITYDFTSITQRDVASSQPAMLRAASQEGSLENQEQQAEH
LRTEINASKANYRSKNGEDSTVNQSVLPKTTLTITQSHLMTALQGMRPSISQDDWKHFTE
LYDNFQNPKKRKVQIGVTFRPGQKMTLA
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgtggggctgtggcgaccccggtggagccgccgccgccaccgtcgtcctgagcgggacc
cgcgactgcttcctgcacctgccgcccgcgctggcctcgctcctccgcctgcagcagggc
caagctgtgaaaatatcctgtggtcatcagcctatatttttgagctggatggaaaccagg
catcgaggtcaccagggtgaaaatattgcagagattaacagacatttggcagagaaactt
ggtatcacagatggagaacaggtgtttcttgaaccctgttcccatgtgtcctcctgtcag
caagtagaagtggaaccgctcacagcagatgattgggaaattctggagctgcatgcttcc
tcccttgaaagacatcttcttgaccagattcgagtggtgtttccaagagccatctttcct
gtctgggttgagcagcacacccacgtttacatcagaatcggtacacttgtgccagcagcc
ccatatgggagattagagccatgcacggagcttctggtatgtcccaaaacacatggacct
gaggagaatatcaccagcacgcctgccacagaacgtgacgtcttgctcaaaaattttgtg
aaaaataatatggaacaagaagaaacattaaaggatccttttgccaaacagccttactta
aagtctggagtccttgaacagagtaaggttgatgcaaacatgatgtttggctcaaatgtt
ctcccaaatatatggaatttcatagggaacattttctctaatacatctgagccgaaacaa
aagacttcgtgtgataacaatgaaatgagcaccttcaaagacaagctgctgaacttaatt
cacatggattccatttttagagtatgtcagtcccagcctcccagtgtacagaatgtatcc
tcctctcatgaatttctgaagtgcagtgctgttcacattttcccatggaatttggaatat
attgatttggatccaaatcccgtagtatcttatgggaaaattaatgagctgctatcccca
agacaacgtcatcaagaagcaaaacaaaatctgccacttgaaaagcaaaatcatttgact
agtacacaggacaaaagtccttctaattctaatagtggtcaagcatccagtgagggatct
gttgttcgaatcgtttggaatggatttgaagacttaaagagtgtcatagagtatggccac
gatggggaagccctgcatgttggaagagtttggattgcagatggtctgagaaaaaagcta
catattgaaatgcattcaacagtccgaattaagtcagttgaatctattcctaaaattcct
gtatctcttacactgcaacccaaacagaacttacataaagatatacaggaagatgatgtt
aaatgtgcattcagttcttggctgcaggattccactactgatgatcacccatggataatg
acaagcactgactgtgtacatctgtctgttaaagaaggaatggaggagtttgtccttagt
gcagcacatcctgtgcgcactgaagaaaataagtctgagaatatttttatactgagtccc
agtttgctgcaaaagacaaatatacaagttcttttacatcctctaagtagaaaagctgat
gatgacaaccaggcacctatgcctgatagagacaagagccttccatacaacaaactgagc
gatttaggaggagtggacaaattaggaacatctttatttgaacatataagccacagtctt
ttggggcgtcctttatctcaaaagctggccgctaatgctgtgggactgcgaagtggaggg
gtgcttctcacaggaggaaagggaagtgggaggtcaacattagcaaaggccatctgcaaa
gaagcttttactagactggatgctcatgtagaagtaattgattgtaaagctttaagagga
aaaagattagtaaacgtaaggaaacgtgtggaagaagcttttttagaggcagcatggaga
caaccatccattattttgatggatgatcttgatcacattgtcggagtaccttctacacca
gagcatgagaacagccctgaaacagttgaaagcaatagactttcttatgttttgaaagat
ttgatgaaagaagttatttccatggggagtttgattgcattaattgccacgagtcagtct
gaacattcccttcatccttcgctggtttcagcacaaggaactcatttatttcagtgcttc
aaatgtatcccatctccagatcagaagcaaagatatgaaatgttgtattccataataaag
aagaaactgaattatgatctgaaggacttctctgatcttgacctccagtgtattgcaaaa
gaaacagaaggttttgttgccagagattttactatgctggtcgatcgtgccattcatacc
tgtgcttctaaccagaatgcatcagataatggtgcagatttgaacttgtctactgtggat
tttcaaaaagctctgaaagattttactccattagctctgagaaatgtcagccttcataaa
cctaaagaccttggctgggacaggattggtggcttaaaagacgtgaagcaaatgctcaag
gataccatcatgttacctgcaaagtatccagaattatttgcaaacctgcccatacgacag
agatcaggggttttgctgtatggagcgcctggaacaggaaaaacactgttggcaggagtg
gttgcaagagagagtggaatgaatttcatcagcatcaagggaccagagctgctcagcaaa
tacattggagcaagtgaacaatcggttcgagatatatttaacagagctcaggcagctaag
ccttgtattgttttctttgatgagtttgattctattgctcctcgccgaggtcatgacaac
acaggagtcactgaccgagtggttaaccagctgttgactcagttagatggtgtggaaggc
ctgcaaggagtttatgtgctagctgctaccagtcgcccggatttgattgaccctgctttg
ttaaggccaggtcgactggataaatgcctgtactgtccacctcctgatcagaattcacgc
tatgaaatcttaaaagctctcagtcattccctgtccttggcaaatgatgtggactttcag
gatttggcagcaaaaacagagcaattcacaggggctgacctaaaagctttattatacaat
gcccaattagaggcagtccatactaatttaaatttaacacaggattttggatctagttct
gatagtgacttcagtctctcttccatggtttttctaaaccacagcaatggctcagatgat
tcagcaatagatggagaagcagggctagagcactctcttacttctttagacatgtctgac
ttgcttcctgaagatccaaggtccaacatgtatcgtctttatttcggaagctcttatgaa
tcagagctgggaaatggaactccttcagaactgagctctttgtgtttgtccggtccaaac
tccataacttacgactttaccagcatcactcagagagatgttgcatcctcacaacctgca
atgctcagagcagcttctcaagaaggctccctggagaaccaggagcagcaagcagagcac
ctgaggacagaaatcaatgctagcaaggccaattacagaagcaagaatggagaggacagc
accgttaatcagtcagtgcttcccaagactactttaactattacccagtctcatctgatg
actgctcttcagggtatgagaccatccattagtcaggacgactggaagcattttactgaa
ctgtatgataattttcagaatcccaagaagaggaaagtacagattggtgtaacattcaga
ccaggacaaaaaatgactctagcttag
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