Ficedula albicollis (collared flycatcher): 101816442
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Entry
101816442 CDS
T02815
Symbol
CDC40
Name
(RefSeq) cell division cycle 40
KO
K12816
pre-mRNA-processing factor 17
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101816442 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101816442 (CDC40)
Spliceosome [BR:
fab03041
]
Complex C
Other components
Step II factors
101816442 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
101816442
NCBI-ProteinID:
XP_005043884
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All DBs
Position
3:complement(69661720..69693788)
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AA seq
519 aa
AA seq
DB search
MVREDVETGVHLDPAIKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAEPAHI
NDFMFEQQRRTFATYGYALDPSVDNPEAATKYIGSVEEAEKNQGLTVFETGQRKIEKRKK
FKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKRGKLEDDKPGEEKTI
LHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLS
GHILLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNNAGTQFLSAAYDRYLKLWD
TETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGA
VNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQS
MDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKTT
KLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggtgagagaagatgtggaaacaggggtgcaccttgatcctgctatcaaggaagttcaa
tacaatcccacttatgaaactatgtttgcacctgagtttggaccagaaaatccatttagg
actcagcaaatggctgcacctagaaacatgctttctggatatgcagaaccagctcacatc
aatgatttcatgtttgaacaacaaagaagaacatttgcaacctatggttatgcattagat
ccctctgtagataaccctgaagctgctaccaaatatattggttctgtagaagaagctgaa
aaaaatcaaggtttaacagtgtttgaaacaggacaaaggaaaattgaaaaaaggaagaaa
ttcaaggagaatgatgcatctaatattgatggttttctgggaccatgggcaaagtatgtt
gatgaaaaagaagtagccaaaccatcagaagaagagcagaaggagttggatgaaataaca
gctaagaggcagaagagaggaaaactggaagatgataaacctggagaggagaagactata
ttacatgttaaagaaatgtatgactatcaggggagatcttatcttcatgtccctcaagat
gttggagttaatctgcgttcaacagtaccacctgagaagtgctatcttccaaagaaacaa
atccatgtgtggtctgggcatacaaagggtgtcagtgcagtcagattgtttcctctgtct
gggcatatactgttgtcttgctctatggattgcaaaattaagctatgggaggtatatggc
gatcgaagatgtctacgaacatttattggacacagtaaagctgttcgagacatctgtttt
aacaatgcaggcactcagttccttagtgctgcatatgaccgctatctaaaactctgggac
actgaaacagggcaatgtatttcaagattcaccaacaggaaggttccttattgtgtcaaa
ttcaaccctgatgaagataaacaaaatctctttgttgcagggatgtcagataagaaaatt
gtgcagtgggatattcgaagtggtgagattgtgcaggaatacgataggcatttgggagct
gtcaacaccattgtgtttgtggatgaaaatagaaggtttgtgagtacatctgatgacaag
agtttaagagtctgggaatgggacattcctgtagacttcaagtacatagctgagccaagt
atgcattccatgccagccgtgactttgtctccaaatgggaaatggttggcttgccagtca
atggataaccaaatcttgatttttggagctcagaacagattcagattaaacaaaaagaaa
attttcaaaggtcacatggtagctggctacgcttgtcaagtggacttttcacctgatatg
agctatgtgatatctggagatgcagatgggaaactaaacatctgggactggaagacaaca
aaactctacagcaggttaaaagcacatgacaaagtctgtattggtgcagtgtggcatcca
catgaaacatccaaagtcatcacgtgtggttgggatggtctgattaaactgtgggactaa
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