Ficedula albicollis (collared flycatcher): 101816500
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Entry
101816500 CDS
T02815
Symbol
TRIO
Name
(RefSeq) trio Rho guanine nucleotide exchange factor
KO
K08810
triple functional domain protein [EC:
2.7.11.1
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fab01001
]
101816500 (TRIO)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101816500 (TRIO)
Enzymes [BR:
fab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101816500 (TRIO)
Protein kinases [BR:
fab01001
]
Serine/threonine kinases: CAMK group
Trio family [OT]
101816500 (TRIO)
Membrane trafficking [BR:
fab04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101816500 (TRIO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3-RhoG_link
RhoGEF
Pkinase
SOS1_NGEF_PH
SH3_KALRN
Spectrin
Spectrin_6
PK_Tyr_Ser-Thr
I-set
PH
Ig_3
SH3_1
CRAL_TRIO_2
ig
SH3_2
PH_10
Spectrin_SESTD1
CRAL_TRIO
Ig_2
IQ_SEC7_PH
SH3_9
PH_19
PH_13
V-set
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
101816500
NCBI-ProteinID:
XP_016152112
LinkDB
All DBs
Position
2:complement(80463370..80646936)
Genome browser
AA seq
3046 aa
AA seq
DB search
MKAMEVLPILKEKVAYLSGGRDKRGGPILTFPARSNHDRIRQEDLRRLISYLACIPSEEV
CKRGFTVIVDMRGSKWDSIKPLLKILQESFPCCIHVALIIKPDNFWQKQRTNFGSSKFEF
ETNMVSLEGLTKVVDPSQLTPEFDGCLEYNHEEWIEIRVAFEDYISNATHMLSRLEELQD
ILSKKEMPQDLEGARNMIEEHSQLKKKVIKAPIEDLDVEGQKLLQRIQSSDSFPKKNSGS
GNADLQNLLPKVSTMLDRLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWITHN
KGLFLNSYTEIGTSHPHAMELQTQHNHFAMNCMNVCVNISRIMSVANRLIESGHYASQQI
KQIASQLEQEWKAFAAALDERSTLLDMSSIFHQKVEQYMSNVDSWCKACGEVELPSELQD
LEDAIHHHQGIYEHITLAYSEVSQDGKSLLDKLQRPLTPGSSDSLTASANYSKAVHHVLD
VIHEVLHHQRQLENIWQHRKVRLHQRLQLCVFQQDVQQVLDWIENHGEAFLSKHTGVGKS
LHRARALQKRHEDFEEVAQNTYTNADKLLEAAEQLAQTGECDPEEIYQAAHQLEDRIQDF
VRRVEQRKILLDMSVSFHTHVKELWTWLEELQKELLDDVYAESVEAVQDLIKRFGQQQQT
TLQVTVNVIKEGEDLIQQLRDSAISSNKTPHNSSINHIETVLQQLDEAQSQMEELFQERK
IKLELFLQLRIFERDAIDIISDLESWNDELSQQMNDFDTEDLTIAEQRLQHHADKALTMN
NLTFDVIHQGQDLLQYVNEVQASGVELLCDRDVDMATRVQDLLEFLHEKQQELDVAAEQH
RKHLEQCVQLRHLQAEVKQVLGWIRNGESMLNAGLITASSLQEAEQLQREHEQFQHAIEK
THQSALQVQQKAEAMLQANHYDMDMIRECAEKVASHWQQLMLKMEDRLKLVNASVAFYKT
SEQVCSVLESLEQEYKREEDWCGGADKLGPNSETDHVTPMISKHLEQKEAFLKACTLARR
NADVFLKYLHRNSVNMPGMVTHIKAPEQQVKNILNELFQRENRVLHYWTMRKRRLDQCQQ
YVVFERSAKQALEWIHDNGEFYLSTHTSTGSSIQHTQELLKEHEEFQITAKQTKERVKLL
IQLADGFCEKGHAHATEIKKCVTAVDKRYRDFSLRMEKYRTSLEKALGISSDSNKSSKSL
QLDIIPASVPGSEVKLRDAAHELNEEKRKSARRKEFIMAELIQTEKAYVRDLRECMDTYL
WEMTSGVEEIPPGIVNKEHIIFGNMQEIYEFHNNIFLKELEKYEQLPEDVGHCFVTWADK
FQMYVTYCKNKPDSTQLILEHAGAYFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKEL
LTCCEEGKGEIKDGLEVMLSVPKRANDAMHLSMLEGFDENIESQGELILQESFQVWDPKT
LIRKGRERHLFLFEMSLVFSKEVKDSSGRSKYIYKSKLFTSELGVTEHVEGDPCKFALWV
GRTPTSDNKIVLKASSIENKQDWIKHIREVIQERTIHLKGALKEPIHIPKTAPTTKQKGR
RDGEDLDSQGDGSSQPDTISIASRTSQNTLDSDKLSGGCELTVVIHDFTACNSNELTIRR
GQTVEVLERPHDKPDWCLVRTTDRSPAAEGLVPCGSLCIAHSRSSMEMEGIFNHKDSLSV
SSNDASPPASVTSLQPHMIGAQSSPGPKRPGNTLRKWLTSPVRRLSSGKADGHVKKLAHK
HKKSREVRKSADAGSQKDSDDSAATPQDETVEERGRNEGLSSGTLSKSSSSGMQSCGEEE
GEEGADAVPLPPPMAIQQHSLLQPDSQDDKTSSRLLVRPTSSETPSAAELVSAIEELVKS
KMALEDRPSSLLVDQGDSSSPSFNPSDNSLLSSSSPIDEMEERKSSSLKRRHYVLQELVE
TERDYVRDLGYVVEGYMALMKEDGVPDDMKGKDKIVFGNIHQIYDWHRDFFLGELEKCLE
DPEKLGSLFVKHERRLHMYIVYCQNKPKSEHIVSEYIDTFFEDLKQRLGHRLQLTDLLIK
PVQRIMKYQLLLKDFLKYSKKANLDTTELEKAVEVMCIVPKRCNDMMNVGRLQGFDGKIV
AQGKLLLQDTFLVTDQDAGLLPRCKERRVFLFEQIVIFSELLDKKKGFSMPGFLFKNSIK
VSCLSLEENVDSDPCKFALTSRTGDVTETFILHSASPGVRQLWIHEINQILENQRNFLNA
LTSPIEYQRNHSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSCSGIPSSSRSRPS
RIPQPVRHHSPVLVSSAASAQAEADKMSGMSIHNHSLPHYNTSLETSLSQPDRHPPSAEP
DGPQREAEQIPKMKVIESPRKTAGNISGSADGAQKDSRGISEDSRTRNSIGSLTLEKPRP
GAISPMNSPLSTTFPSPFGKETFPPSSPLQKGSFWSSIPASPASRPGSFTFPGDNDSLQR
QVHRHSSHSKDTDRMSTCSSTSEQSVHSTQSNGSESSSSSNISTMLVTHDYTAVKEDEIN
VYQGEVVQILASNQQNMFLVFRAATDQCPAAEGWIPGYVLGHTSAIIIDNPDGTIKKSTS
WHTALRLRKKSEKKDKDGKREGKLENGYRKSREGLANKVSVKLLNPNYIYDVPPEFIIPL
SEVTCETGETIVLRCKVCGRPKASVTWKGPDHNTLSNDGHHSISYSDLGEASLKIVGVTA
EDDGIYTCIAANDMGSVSSSASLRVLGPGSDGIMVIWKDNFDSHYSEVAELGRGRFSVVK
KCDQKGTKRAVATKFVNKKLMKRDQVTHELGVMQNLQHPQLIGLLDTFETSTSYILVLEM
ADQGRLLDYVVRWGNLTEGKIRLYLGEILEAVQYLHNCRIVHLDLKPENILVDQSSTKPT
IKLADFGDAVQLNTTYYIHQLLGNPEFAAPEIILGNPVSLTSDVWSIGVLTYVLLSGVSP
FLDESVEETCLNICRLDFSFPDDYFKGVSQKAKDFVCFLLQDDPAKRPSAALALQEQWLQ
LGNSKSADSIDTSRLTSFIERRKHQNDVRPIRSIKNFLQSRLLPRV
NT seq
9141 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctatggaagttttgccaattttaaaggaaaaagttgcatacctttcaggtggc
agagataagcgtggaggtcccattctaacatttccagctcgtagtaatcacgacagaata
cggcaagaagaccttagaagactcatttcgtatctagcgtgtattcctagtgaggaagta
tgtaaacgaggattcactgtcattgtcgatatgcgtgggtcaaaatgggactccataaag
cctctgctgaagattttacaggaatcctttccatgttgtattcatgttgcactgataatc
aagccagacaatttctggcagaaacagaggactaactttggcagctctaagtttgagttt
gagacaaatatggtgtctctggaaggccttaccaaagtagttgatccttctcagctaacc
ccagaatttgatggctgtttggagtacaaccatgaggagtggatagaaatcagagttgcc
tttgaggactacattagcaatgcaacccatatgctgtccagactggaggaactgcaagat
atattgtcaaaaaaggaaatgcctcaggacctggaaggtgctcgcaatatgatagaggag
cattcacaattaaaaaagaaagtcattaaggcccctatcgaggaccttgatgtggaagga
caaaagctgctccagcggatacagagcagtgatagctttcccaaaaagaactctgggtca
gggaatgcagacttacagaaccttttacccaaagtgtccaccatgctggacaggctgcac
tcaacacggcagcatctgcatcagatgtggcatgtgcggaaattgaaattggaccaatgc
tttcagctcaggctgtttgagcaggatgctgaaaagatgtttgactggatcacacacaac
aaaggtctgtttctgaacagctacacagagattggaaccagtcacccccatgcgatggag
cttcagacacagcacaatcactttgccatgaactgtatgaatgtgtgtgtaaacataagc
cgcatcatgtcagtagcaaaccgcctgatcgagtctggccattacgcttcacagcaaatc
aaacagattgccagtcagttggaacaggagtggaaggcatttgctgcagccttggatgaa
cggagcacgttactggacatgtcctccatcttccatcaaaaagtcgaacagtacatgagc
aatgtggactcatggtgcaaagcctgtggtgaggtggagcttccctcagaactgcaagat
ttagaagatgctatccatcatcatcaagggatatatgagcacattaccttggcttactct
gaggtgagccaagatgggaagtcactccttgacaaacttcagagacctttgactcctggg
agttccgattccctcaccgcatctgccaactactccaaagcagttcatcatgtcctggat
gtcatccatgaagtgctgcaccaccagcgccaactggaaaatatctggcagcatcgcaag
gtccgcttgcaccagcggcttcagctctgcgtttttcaacaggatgttcaacaggtgttg
gattggattgaaaaccatggagaagcttttcttagcaaacacactggagtgggaaagtcc
ctgcatcgggccagagctttgcagaaacgccatgaagacttcgaagaggttgcgcagaac
acatatacaaatgcagataagctcctagaagcagcagaacagcttgctcagactggggag
tgtgacccagaggaaatttatcaggctgcccaccagctcgaagaccggatacaggatttt
gtcaggcgtgtggagcagcgcaagatcctgctggacatgtctgtgtcctttcacactcac
gttaaagagctgtggacgtggcttgaagagctacagaaagagctgcttgatgatgtctat
gctgagtctgtggaggctgtccaagacctgattaaacgttttggtcaacaacaacaaacc
actctgcaggttaccgtcaatgtcataaaagaaggtgaagatctcatacagcagctaagg
gattctgccatttctagtaacaaaaccccccataacagctcgatcaaccacatagagaca
gtcctgcagcagctggatgaggcccagtctcagatggaggagcttttccaagaacgcaag
atcaaacttgagctgtttctgcagctccgcatatttgaaagagatgcaatagatataatt
tcagaccttgagtcttggaatgatgagctctctcagcagatgaatgactttgacactgaa
gatcttacaatagcagaacagaggctccagcatcatgcagacaaagccctgaccatgaat
aacttgacctttgatgtcatccaccaagggcaggatctgctgcagtatgtcaatgaagtg
caggcatctggtgtggagctgctttgcgacagagacgtggacatggccacgcgcgtgcag
gacctgctggagttcctgcacgagaagcagcaggagctggacgtggcggcggagcagcac
cgcaagcacctggagcagtgcgtgcagctgcggcacctgcaggctgaggtcaagcaggtt
ttgggctggatccgaaatggagagtcaatgttaaatgctgggcttatcactgctagctct
ttgcaggaggcagagcagttacagagggaacatgagcagtttcaacatgcaatagagaaa
acacatcagagtgccctgcaggttcagcagaaggcagaggcaatgctgcaggctaatcac
tacgatatggatatgatccgggagtgtgcagagaaggtcgcttcccactggcagcagctg
atgctgaagatggaggatcgtctcaagcttgtgaatgcctctgttgccttctataaaact
tctgaacaggtgtgcagtgtgctggaaagcctggaacaagaatataagcgagaggaagat
tggtgtgggggagcagacaaactgggtcccaactctgaaacagatcatgttactcccatg
ataagcaaacacctggagcagaaggaagcctttctaaaggcctgcacactggctcggagg
aatgctgatgtcttcctgaaatacctgcacaggaacagtgtcaacatgccagggatggtg
acacacatcaaagcacctgaacaacaagtgaaaaatatcttgaatgagctcttccagagg
gagaaccgtgtgctgcattattggaccatgcgtaaaagacgtcttgatcaatgccaacag
tatgtggtgtttgaaagaagtgccaaacaggctctggaatggattcatgacaatggagag
ttttatttatccacacatacttccactggttccagtatccagcatactcaagagttgtta
aaagaacatgaagaatttcagatcacagcaaagcaaaccaaagagagggtgaagttgttg
atacagctggctgatggcttttgtgaaaaagggcatgctcatgcaacagagattaaaaaa
tgtgtcacagcagtggataagaggtacagagacttttccctgcgcatggagaaatacagg
acctctttagagaaagctctgggtatttcctctgattccaataaatcgagcaaaagcttg
cagctggatataatcccagccagtgtccctgggtcagaggtgaaactgcgcgatgctgct
catgagcttaacgaagaaaaacgaaagtctgcccgcaggaaagagttcattatggctgag
ctaattcagacagaaaaggcttacgtaagagacctccgggaatgcatggatacatatcta
tgggaaatgacaagtggagttgaggagatcccgcctggcattgtaaacaaagaacacatt
atctttggaaacatgcaggaaatttatgagttccacaataatatatttctcaaggagttg
gaaaaatatgaacagttaccagaagatgttggacactgctttgttacttgggcagacaaa
ttccagatgtatgtaacctactgtaaaaataagccagattccactcagctgatattagaa
catgcaggagcatactttgatgaaatacaacaacgacatggactggccaactctatctcc
tcttaccttatcaaacctgtccaaaggataacaaaataccagcttcttttaaaggagctg
ctcacgtgctgtgaagaaggtaaaggtgagattaaggatggcctggaggtgatgcttagt
gtgccaaagcgagccaatgatgccatgcacctcagcatgctggaaggctttgatgaaaat
atagaatctcagggagagctcatccttcaagaatccttccaagtgtgggacccaaaaact
ctgattcgaaagggaagagagaggcaccttttcctttttgagatgtccttggttttcagt
aaagaagtaaaggactcaagtggaaggagcaagtatatttacaagagcaaactgtttact
tctgaactgggtgtcacagaacatgtagaaggagatccctgcaagtttgctctgtgggtt
ggaaggacaccaacttcagacaacaaaattgttctcaaggcatccagtatagagaataaa
caggactggatcaaacacatccgggaagtgatacaagaaaggactattcatctgaaagga
gcattgaaagagcccatccacattcccaaaactgcgccaacaacaaaacagaaaggaaga
agagatggcgaggacctggacagtcagggagatggcagcagccagcctgataccatttct
attgcctcaagaacctcccagaacacactagacagtgataagttgtctggcgggtgcgag
ctgaccgtggtgatccacgacttcaccgcctgcaacagcaacgagctgacaatccgccgt
gggcagacagtggaggtgctggagaggccccatgacaagcccgactggtgcctggtgcga
accaccgatcggtccccagccgccgaaggcctggtcccctgcgggtccctctgcatcgcc
cactcccgcagcagcatggagatggagggcatttttaaccacaaagactccctttcggtc
tccagcaatgacgccagtcctcccgcgtccgtcacgtcgcttcagccgcacatgatcggt
gctcagagctccccgggccccaaacgccctggcaacaccttgaggaagtggctcaccagc
cctgtgaggcgcctcagcagcggcaaagcagacgggcacgtcaaaaagctggcccacaag
cataagaaaagcagggaggtccgcaaaagcgccgatgcaggctctcagaaggactccgac
gacagcgcagccaccccgcaagatgagactgtggaagagagaggtcggaacgaggggctg
agcagtggcactctgtccaagtcatcctcttcaggcatgcagagctgcggagaggaggag
ggcgaggagggagcagatgctgtgccactgcctcctcccatggcaattcagcaacacagc
cttctccagcccgactcgcaggatgacaagacatcttctcgactcttggtgcggccgaca
agctccgagacgcccagcgctgctgaactcgtcagtgccattgaagagctcgtcaaaagt
aaaatggctctggaggaccgtccaagttccttgttggtagatcaaggtgacagcagcagt
ccatccttcaacccttcagataactcccttctatcctcctcatcacccatagatgagatg
gaggaaaggaaatccagctccttaaaaagacgacactatgtcttacaggaattagtggag
acagagcgagattatgtgcgagatctgggctatgtagttgagggttatatggcacttatg
aaggaagatggcgtacctgatgatatgaaaggcaaagacaagatcgtgtttggaaacatt
caccagatttatgactggcacagagacttctttttaggagagttggagaagtgccttgaa
gatccagaaaagctgggatccctgtttgttaaacatgagagaaggttgcacatgtacata
gtttactgccaaaacaaaccaaagtctgagcacattgtctcagaatatattgatacgttt
tttgaggatctaaagcaacgcctgggccacagacttcagctcacagacttgctaataaaa
cctgtgcagagaattatgaaataccagctattactaaaggacttcctcaagtattctaaa
aaagctaaccttgacacaacagaactagagaaagctgtagaggtcatgtgtatagtacca
aaacggtgtaatgacatgatgaatgttggccgcctgcaaggatttgatggtaaaattgta
gcccagggtaagctcctgctccaggacacattcttggttacagaccaggatgcaggactt
ctgccacgctgcaaggagagacgggtcttcctgtttgagcagattgtcattttcagtgag
ctgctagataaaaagaaaggtttctccatgcccggattcttgtttaaaaacagcatcaag
gtgagttgcctttccctggaggaaaatgtggacagcgatccatgtaaatttgcactaaca
tcaagaacgggcgatgtcacggagaccttcattttgcattctgccagtccgggagtccgc
cagttatggatccatgaaattaaccaaattttggaaaaccagcgcaactttttaaatgcc
ttgacgtccccgatcgagtaccagaggaaccacagcgggggggggggggggggggggggg
gggggggggggggggggggggggggggggggggggggggggggggggggggggggggggg
ggggggggggggggggggagctgtagtggcatccccagctccagccgtagccggccatcc
cggatcccccagcctgtcagacaccattccccagtcctggtctcctctgcagcctcggcc
caagcagaggcagacaagatgtcaggtatgtccattcacaatcactccctgccacactac
aacacctccttagaaactagcctgagccagccagacaggcaccctcccagtgcagagccg
gatggtcctcagagagaagccgaacagattcccaagatgaaagttattgaaagtcccagg
aagacagcaggaaacatttctggctcagctgatggagcccagaaagactcacgtggaatc
tcagaggacagccgaacaaggaacagcataggatcactgacgcttgagaagccaaggcca
ggagccatctctccaatgaactctcctctgtccacgactttcccttctccttttggcaag
gaaacctttccacccagcagccccctgcagaagggctccttttggagctccatcccagca
tcccctgccagccgccctggctccttcactttccctggggacaatgactcccttcagcgg
caggtccaccgccactcttcacacagcaaggacacagaccgcatgagcacatgctcctcg
accagcgagcagtcagttcactccacccagagtaatgggagtgaaagtagcagcagtagc
aatatctccaccatgctggtgacacacgattacacggcagtgaaggaggatgagataaat
gtctaccaaggagaggtcgtgcagattctagccagcaaccaacagaacatgtttttggtg
ttcagagccgccaccgatcaatgccccgcagccgagggctggattcccggctatgtcttg
gggcataccagtgcaatcatcattgacaaccctgatggaaccatcaagaagtcaacgtct
tggcacacagcactccgattaaggaagaaatctgagaaaaaagataaagacggcaaaagg
gaaggcaagctagaaaatggttatcgcaaatcccgagaaggacttgccaacaaggtttcc
gtaaaacttctcaaccccaattacatttatgatgttcccccagagtttataattccattg
agtgaggttacatgtgagacaggagagaccatcgtgcttaggtgtaaagtctgtggtcgc
cccaaggcttcagttacttggaaaggtcctgatcataatacactgagcaatgacggtcat
cacagcatttcgtacagtgacctgggcgaggcgtcgctgaagatcgttggcgtcactgcg
gaagacgatggtatctacacgtgcatagctgcaaacgacatgggttcggtttcatcctcc
gccagtctacgagttttaggtcctggaagtgatgggatcatggtaatctggaaagacaac
tttgattcccactatagtgaagtggctgagcttggcaggggcagattttctgtcgtgaag
aagtgtgaccagaagggaaccaagcgagcagtagccactaagtttgtgaataagaagttg
atgaagcgagaccaggttacccatgaacttggagtcatgcagaatctccagcatccccag
ctcattggccttcttgatacctttgagacctccaccagctacatactagtgttagaaatg
gctgaccagggtcgccttctagactacgtcgtgcgatggggaaacctcacagaggggaag
atcagactctacctgggagagattctggaagctgtgcagtaccttcataactgcagaata
gtacatttggacctaaagcctgaaaatattttggtggaccagagttccaccaagccaaca
ataaaactggctgactttggagatgcagtccagctcaataccacgtattatatccaccag
ttacttggaaacccagaatttgcagctcctgaaattattcttggaaatcctgtttcactc
acttcagatgtttggagcattggagtgctcacttatgtccttcttagtggcgtctctcct
ttcctggatgaaagtgtagaggaaacttgcctgaatatttgccgcttagactttagtttc
ccagatgactacttcaaaggagttagccagaaggccaaagattttgtatgcttcctactt
caggatgacccagctaagcgtccctcggctgcactggccctccaggagcaatggctgcag
ctggggaatagcaaaagtgctgacagcattgatacatccagactgacttcgttcattgag
cggcgaaaacaccagaatgatgttcgacccatccgtagcattaaaaacttcttacagagc
aggctcttgccaagagtttga
DBGET
integrated database retrieval system
