Ficedula albicollis (collared flycatcher): 101816586
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Entry
101816586 CDS
T02815
Symbol
LINGO1
Name
(RefSeq) leucine rich repeat and Ig domain containing 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101816586 (LINGO1)
Membrane trafficking [BR:
fab04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
101816586 (LINGO1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
101816586
NCBI-ProteinID:
XP_005051598
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Position
10:complement(1427500..1490912)
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AA seq
663 aa
AA seq
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MHQKNSGFSQQTQLTNSVHEWKAEERPKPSAHLASDPPASCLHLTQVRDRMVAGEASMRS
PILACWQPILLLMLGSILSGSATGCPPRCECSAQERAVLCHRKRFMVVPEGIPTETRLLD
LGKNRIKTLNQDEFANYPHLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLG
VFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLT
LEKCNLTSIPTEALSHLHGLIVLRLRHLNINTIRDYSFKRLYRLKVLEISHWPYLDTMTS
NCLYGLNLTSLSITHCNLTSIPYVSVRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQ
LVGGQLTTVEPFAFRGLNYLRILNVSGNLLTTLEESAFHSVGNLETLILDNNPLACDCRL
LWVFRRRWRLNFNKQQPTCSTPEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVD
EGHTVHFVCRADGDPPPTIMWLSPRKHLISTKTNGRLTVFPDGTLEVRYAQIQDNGTYLC
IASNAGGNDTMLAHLHVRSYSPDWPHQPNKTFAFISNQPNESDANSTRATVPFPFDIKTL
IIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGISSADAPRKFNM
KMI
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaaaaaattcaggtttcagtcaacagactcagctcacgaattcagtgcatgag
tggaaagcagaggagaggccaaagcccagtgcacacctggcatctgatcccccagcatcc
tgccttcatctgacccaggtgagagataggatggtagctggggaggcgagtatgcgcagc
ccaatcctggcctgctggcagccgattctcctgctgatgctgggctccatcctgtccggc
tccgccacgggctgcccgccgcgctgcgagtgctctgcccaggagcgcgccgtcctgtgc
caccgcaagcgcttcatggtggtgccagaggggatccccaccgagaccaggctgctggac
ttgggcaagaaccgcatcaagacgctcaaccaggatgaatttgccaactaccctcacctg
gaggagctggagctgaacgagaacattatcagtgccattgaacctggggctttcaacaac
ctcttcaacctcaggacgctggggctcaggagtaacagactcaagctgatccccttgggg
gtgtttactggactcagcaaccttaccaagctagacattagtgagaacaaaattgtgatc
ctcctagactacatgttccaggacttgtacaacctgaagtctttggaggtgggggacaac
gaccttgtctacatctcccaccgggccttcagtggcctcaacagcctggagcagctgacc
ctggagaaatgcaacctgacctccatccccacggaggccctgtctcaccttcacggcttg
atcgtgctgcggctgcggcacctgaacatcaacaccatccgggattactcattcaagagg
ctctaccggctcaaggtcctcgagatctcacactggccatacctggatactatgacatcc
aactgcctctatgggttgaacctgacctccttgtccatcacccactgcaacctgacgtcc
atcccgtacgtgtcggtgaggcacttggtttacctccggttcctgaacctgtcctacaac
cccatcgtcaccatcgagggctcgatgctccatgacctgctcaggctccaagagatccag
ctggtgggagggcagctcaccacagtggagcccttcgccttccgcggcctcaattacctg
cgcatcctgaacgtgtcagggaacctgctgaccaccctggaggagtcagctttccactcg
gtgggcaacctggagacgctcatcctcgacaacaaccccttggcctgcgactgtcggctg
ctctgggttttccggcggcgatggaggttgaacttcaacaagcagcagcccacctgctcc
acccccgagttcgtccagggcaaggagttcaaggacttccctgacgtcctcctgcccaac
tacttcacctgccgccgagcgcggatacgggatcgcaaacctcagcagatcttcgtggac
gaaggccacacggtgcattttgtctgccgggcagatggggacccgccgcccaccatcatg
tggctctctccccggaagcacctcatctctaccaaaaccaacgggcggctcactgtcttc
cctgacggcacgctggaggtgcgctacgcccagatccaggacaacggcacctacctatgc
atcgccagcaacgcgggtggcaacgacaccatgctggcccacctgcacgtgcgcagctac
tccccagactggccccaccagcccaacaagaccttcgcgttcatctccaaccagcccaac
gagagcgatgccaacagcacgcgcgccaccgtgcctttcccctttgacatcaagactctc
atcatcgccaccaccatgggcttcatctccttcctgggcgtcgtgctcttctgcctggtg
ctcctcttcctgtggagccgtgggaaaggcaacaccaagcacaatattgaaattgagtac
gtgccacgcaagtccgacgcgggcatcagctctgccgacgcgccgcgcaagttcaatatg
aaaatgatttaa
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