Ficedula albicollis (collared flycatcher): 101816597
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Entry
101816597 CDS
T02815
Symbol
BRAT1
Name
(RefSeq) BRCA1 associated ATM activator 1
KO
K23112
BRCA1-associated ATM activator 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fab03400
]
101816597 (BRAT1)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101816597 (BRAT1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_EZ
RTP1_C1
Cnd1
TPR_Trm732_C
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
101816597
NCBI-ProteinID:
XP_005054490
UniProt:
U3KHI3
LinkDB
All DBs
Position
14:complement(11940047..11948024)
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AA seq
854 aa
AA seq
DB search
MCDPQSRFVARARRRFAMTRECAALLPGVCAALADPRQPGLDDTCLEKLLDWFRSLTWFD
PTVELVQDNPCLPELITSVLALPDPSPGILSFTLQLAGILASSESRFQHLQEEKLLGRLF
GQEGPRGGAAWEEASVRSAWLKGVHSMLHHQPALPFLCSTGAMDVIFTLQGDPSLFVASA
ASQLLVHMLTFSLESETSKALSAKDCDWPVCAQMIVKHIQESLQSSSASHIEQSLKLLSS
LFGSCFGSCYAAWTEVLWLDIAKQIESFLLEETVQAQPVLANLLLNVARSPVFCGTEGSF
WALVTSALEHLTPVQAGPLAVGLLKLCKCPQDVRIQALTVLLQPMDCILRAASQPLECAG
LLDESVSDPVAVESLLSSKTSCAGLLCQTLAHLEKLLSLKHLKVDLPCVSLLRSLMTILQ
FCNGFLSPTSPLGSTISRNLINCFRVQKSALDVLAALSEKKDCDTLIGSLFDVLLAYLQS
PNSSPTVLKKTFQATSKWLVHLQELSSSNSQQQQTEKILEGVFLVLQKRLCSPCWEVRDS
SLEFLTAMVKCLRDQKEFRQCLLSSEVLRLTENLLEDPESYVRASAVIAVGHLTLITCFA
PESPATGSQYNKESIVAKLQEILSTDSEGFPRRAVISIFTKWLREGCTGRLEDTEQFVSR
AIQTVEHDLDWEVRLGGLELVEVFCSQTICQLAQCPYAPVSSAVTSSTPQKELLQVFCRA
KLFGFLFGSLCDCDKPVGQRACDVLVGLRGHFYPMSTLENPQEVEDSPAGRGIAWLQRTL
RQGSLAQNFPTDGGDGVDFQDPESMMLALGAIDLLELHDELNKSSDHVEESPQSLLQDIL
ATVGTIEDNEVDCY
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgacccccagtcccggttcgtggcccgggcccgccgccgcttcgccatgacccgc
gagtgcgccgcgctgctgcccggcgtgtgcgccgcgctggccgacccgcggcagcccggc
ctcgacgacacctgcctggagaagctgctggactggttccgcagcctgacgtggttcgat
cccactgtggagctggtgcaggacaacccgtgtctgccagagctcatcacctccgtgctg
gccctgccggatcccagccccggcatcctgtccttcaccctgcagctggctgggatcctc
gcctcctccgaaagccgcttccagcacctgcaggaggagaagctgctggggaggctgttt
gggcaggaggggccccggggcggtgcggcgtgggaggaggcgtcggtgcgcagcgcctgg
ctgaagggtgtgcacagcatgctgcaccaccagcctgccctgcccttcctctgctccacg
ggagccatggatgtgatcttcactctgcaaggggatcccagcctgtttgtggcttcagct
gccagccagctcctggtgcacatgctcaccttctccctagagtccgagacatcaaaagct
ctcagtgccaaggactgtgactggccagtgtgtgcccagatgattgtgaagcacatacaa
gagtcactgcagtccagctctgcctctcacatcgagcagtcactgaagctgttgagcagt
ttgtttggcagttgttttggcagttgttatgctgcatggactgaagtcctttggttagac
atagcaaagcagatagaatcctttctgctggaggagactgttcaagcacagcccgtgctg
gctaatcttctgcttaacgtggcacggtcccctgtgttttgtggcactgaaggcagcttc
tgggcattagtaacttctgctctggaacacttaaccccagtacaagcaggtcctctggca
gtgggacttttgaagctctgcaaatgcccacaagatgtcaggattcaggcactgactgtt
ctccttcagccaatggattgtattttgagagcagcatcccagcctctggaatgtgcaggt
ttgctggatgagtctgtcagtgatcctgttgctgttgaaagtcttctgtcctctaagaca
tcttgtgctggtctcctgtgtcagaccctcgctcacctggaaaagctgctctctctgaaa
catttaaaagtggatttaccctgtgtgtctttgctgcgctctctcatgacaatattgcaa
ttctgcaatggcttcctgagcccaacttctcctctgggaagcacaataagccggaatttg
atcaattgctttagagtgcaaaagtcagctcttgatgtccttgcagcactctcagagaaa
aaagactgtgacacactcataggaagtctatttgatgtccttctggcatatctgcaaagt
ccaaacagcagccctactgttctaaagaaaacctttcaagctacatccaagtggttggtg
cacttgcaggaactgtcctcctccaatagtcagcagcaacaaactgagaagattttggaa
ggtgtgtttctggtactgcagaaacgtttgtgcagtccttgctgggaagtaagagattct
tccctggagttcctcactgccatggttaagtgcttgagagaccagaaggagttcaggcag
tgtctcctgtcctcagaggtgctgaggctcacagagaacctgctggaggacccggagagc
tacgtgcgagcaagcgccgtgattgcagtgggacacctgaccctcatcacttgctttgct
ccagagtcccctgccacaggcagtcagtataacaaagagagcattgtagcaaaacttcag
gaaatcttgtcaacagactcagagggctttccaaggagggctgtgatcagcatcttcacc
aagtggctgagagaaggctgcacaggtcggctggaagatacagagcagtttgtctctaga
gccatccagactgtggagcatgacttagactgggaagtcagacttggtggtttggagctg
gttgaagttttctgtagtcagaccatttgccagcttgcccagtgtccctatgctcctgtc
tcctctgcagtcacaagttccacacctcagaaggagctgctgcaggtgttttgtcgagca
aagttgtttgggtttttgtttggatctttgtgtgactgtgacaaacctgtgggacagaga
gcctgtgatgtgctggttggcttgagaggtcatttctaccccatgagtactttggagaat
ccacaagaggttgaagattcacctgcaggacgtggcattgcctggttgcagaggacacta
agacagggttctctggctcagaacttccccacagatggtggtgatggggtggatttccag
gatccagagagcatgatgttagctttgggtgcaatagacttactggagctgcatgatgag
ctaaataaaagtagtgaccatgtggaggagagccctcagtccctcttacaggacatcctt
gctactgtggggaccatagaggataatgaagttgactgttactga
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