KEGG   Ficedula albicollis (collared flycatcher): 101816798
Entry
101816798         CDS       T02815                                 
Symbol
WDR18
Name
(RefSeq) WD repeat domain 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fab03009]
    101816798 (WDR18)
Ribosome biogenesis [BR:fab03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    101816798 (WDR18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_WDR75_2nd Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_Vps41 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_IP5PC_F WDR54 Ge1_WD40
Other DBs
NCBI-GeneID: 101816798
NCBI-ProteinID: XP_005060201
LinkDB
Position
28:3365107..3373965
AA seq 371 aa
INVWELQRKDQLQQKIICPGPVTCLTASPNGLYILAGVAESIYLWEVSNGNLLAILNRHY
QDLTCLCFTDDSSHFLSGAKDCLALVWNLYNVLQAEPSQIPDPRHVWSQHSLPITDLCCG
FGGPLARAATASLDQTAKLWEISSGELLLSVLFDVGIMAVTLDLSEFHMFCGGMDGSIFQ
VDLCAWPVQRDRTFQTERENGKVFKGHRNQVTCLSVSTDGSLLLSGSHDETVRLWDIQSK
QCLKTMNHKGPVTNAFIVLAPANMFNPDGKPSVPLPKFSRHLHGTESSDEPGTEGVTLRL
GLHQQEPGQSYLEKAEKMYSQMYSTREENLVGDQEHLTIQVSELEEEVSNLRKINKDLFD
FSTRIITKPAK
NT seq 1116 nt   +upstreamnt  +downstreamnt
atcaacgtctgggagctccagaggaaggaccagctgcagcagaagatcatctgtcccggg
cctgtgacctgcctgacagcctctcccaacgggctctacatcctggcgggggtcgccgag
agcatctacctgtgggaggtgtccaacgggaacctcctcgccatcctgaaccgacactac
caggacctcacgtgcctctgcttcactgacgacagcagccacttcctctcaggggccaag
gactgcctggccctggtgtggaacctctacaatgtgttgcaggcagagccctcccagatc
cctgacccccggcacgtctggtcccagcacagcctccccatcaccgacctgtgctgcggc
ttcggagggcccctggcacgggctgccaccgcctccctcgaccagacagccaagctctgg
gaaatctcatctggggagctcctgctttccgttctcttcgacgtggggatcatggctgtg
actctggacctctctgagttccacatgttctgcgggggcatggatgggtccatcttccag
gtcgatctctgcgcctggccggtacagagagaccggaccttccagacggagcgggagaac
gggaaggtctttaaagggcacaggaaccaggtgacatgtctgtcagtctccacagacggc
agcctcctgctctcgggctctcacgacgaaaccgtccggctgtgggacatccagagcaag
cagtgcctgaagacgatgaatcacaaaggtccagtgacaaacgccttcatcgtgctggcg
cctgccaacatgttcaaccccgacgggaagcccagcgtgcccctgcccaagttcagcagg
cacctgcacggcaccgagagcagcgacgagccgggcactgagggggtgacgctgcgcctg
gggctgcaccagcaggagcctgggcagagctacctggagaaggcagagaagatgtactcg
cagatgtactccacgagggaagagaacctggtgggagaccaagagcacctgacaatccag
gtgagcgagctggaggaggaggtgagcaacctccggaaaatcaacaaggacctctttgac
ttctccactcgcatcatcaccaaaccagccaagtga

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