Ficedula albicollis (collared flycatcher): 101816838
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Entry
101816838 CDS
T02815
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF like domains 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
fab04990
]
101816838 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
fab04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
101816838 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_3
Fn3_Dep-1_4th
Ig_DSCAM-DSCAML_C
cEGF
Motif
Other DBs
NCBI-GeneID:
101816838
NCBI-ProteinID:
XP_016156090
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All DBs
Position
9:4091125..4111817
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AA seq
1456 aa
AA seq
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MQVLAGWAVLVALGEWLWAGAEVPLGDFYPFGPAQGDAATRKQDDGGSELRPLSIPFPFF
GAGHTGLYVNNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRRAGEIYYRESTE
QPILERASRDIAQYFPEFPGFSAQWVFIATWYRVTFFGGNSFSPVNTFQIVLITDGKLSF
TIFNYESITWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIADVEMTT
NVGIPGRWVFRIDDAQVQVGGCSNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLAGF
TGKRCHVDVDECLSHPCQNGATCLNGAGRFTCRCPPGFRGNHCETEESPCENRVCQNGGS
CQVVNKTAACLCQSGYTGVDCQTEVNECESSPCLNGGHCMDLVDNYTCVCLEPFVGQRCE
TDSSSCEDRSCQNRQTCNYIRPGRYICTCSPGYYGSNCQYGGPRVPGACLSHPCQNAGSC
LETEQGYVCECQEGYTGQDCRDELSEGCECRNGGSCLEGNVTVCQCLPGFFGLLCEFEVT
TTPCNMNTQCPDGGYCMEYGGSYLCVCHTNYGSNHTMPSPCDSEPCLNGGSCKVHDDSYI
CECPQGFLGVHCEKAKPRLCSTGPCRNGGTCREANGEYHCTCPYRFTGKHCEIGKPDPCA
SGPCQNGGTCFHYIGKYKCDCPPGYTGRHCEIVPSPCFLSPCENGATCEDLDGGYVCTCS
VGYVGKHCQFEVDCGIPSEVKHAQASFNSTKVGSVAEYQCELGYILSQHNHPRVCRVPGV
WSDPPECDEIDECQSQPCLNGGQCKDRVSAFLCLCEPGYTGYHCELDVDECQSEPCKNSG
TCQDLPGSFACFCPEGFLGTQCETEVDACESDPCRNGGECESYGGSYLCVCPEGFFGYHC
ETASDPCFSSPCGSRGYCLPSNGTHSCTCKVSYTGKNCEKELLPPTSLKVERVEDTGVLI
SWHPPEDAAARQLIDGYAVTYVSLDGSYRRTDFVDRSRSAHQLRALTSGRAYNISVFSVK
RNVNNKNDISRPIMLTTRTRPRPVEGFEITNVTASAITVQWALHRLQHSTVSRVRVSIRH
LGDLAARTVELNSSVAKYTFLDLQPGERYIIHVTTLSGLGVEDHPSESLATPPFHVWTRP
LPPQNLTASHVTATSVSMAWEQPPAGTMEGYIINVTTAQSVKSRYVPNGKLVSYTVRDLL
PGQRYHLSLTAVQNTEQGQVHSEPIHLYVNTLQRDGAPERRWSQAGHPRVLRNRLPPAFL
PELRLLADRDTAEEPSPAPRFTELVDGRGRISARFGTALGKSITLKTQPEAPVRLENTEV
SSWDSLALQLREAKSKREGQKCSKNPCRNGGTCTRDEESYHCACRPGFKGRLCQLACKKV
PHSCTRLYSETRSFPVWEGGTCHYLSRRVYKVHQDICYKESCESTSSERTSSRYSTQQQK
AKQQSHTEEAIEGLKQ
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcctggcaggctgggccgtgctggtggcactgggcgagtggctgtgggccggt
gcggaggtgccgctgggggatttctaccccttcgggccggcccagggcgacgccgccacg
cgcaagcaggacgacggtggctccgagctgcggcccctctccatccccttccccttcttt
ggtgcagggcacaccggcctctatgtaaacaacaatgggatcatctcgttcctgaaggag
gtctcccagttcacacccgtggccttccccatctcgaaggaccggcgtgtggttgctgct
ttctgggcagacgtggataatcggcgggcgggtgaaatctattaccgagagagcaccgag
cagcccatcctggagagagccagcagggacattgctcagtacttccccgagttcccaggg
ttttctgcacagtgggtcttcattgcaacctggtaccgagtcaccttcttcgggggcaac
tcgttctcaccagtaaacactttccagattgtcctcattacggatggcaagctttccttc
accatctttaactatgagtccatcacctggaccacgggtatgcacgccagcagtgggggg
gactttgctgggctcggtggcatcgcggcacaggcaggttttaacgctggtgatggaaag
cgctacttcaacatccccggatcccgcaccgatgacatcgctgacgtggagatgacgaca
aatgtgggtatccccgggcgctgggtgttcagaatcgatgatgcccaggtgcaagtgggg
ggctgcagcaatacaacctctgtctgcctgacactgcggccctgcctgaatggggggaag
tgtatcgaggactgcatcacagggaacccctcctacacctgctcctgcctggccggtttt
actgggaagaggtgccacgttgatgtggatgagtgcctctcccacccatgtcagaacgga
gccacctgcctcaatggtgctggcaggttcacctgcaggtgccctccaggcttcagaggc
aaccactgcgagactgaagaatcaccatgtgagaacagagtgtgccagaatggtgggagt
tgccaggtggtgaacaagacagcagcatgcttgtgccagtcgggatatacaggggtggac
tgccaaacagaggtgaatgaatgtgagtccagcccatgcctgaacggtgggcactgcatg
gacctggtcgataactacacctgtgtgtgcctggagccctttgttggacagcgctgcgag
acagattcatcttcctgcgaggaccggagttgccagaaccggcagacatgcaactacatc
cgccctggccgctatatctgcacctgctccccgggttattacggcagcaactgccagtat
ggtgggccccgcgtgcccggcgcctgcctctcccacccgtgccagaacgcaggcagctgt
ctggagactgagcagggctacgtctgtgagtgccaggagggctacactggacaggactgt
cgagacgagctgtctgagggctgtgagtgtcgtaatgggggcagttgtctggaggggaat
gtcaccgtctgccagtgccttcctgggttttttggtctcctctgtgaatttgaagtcacc
acgacaccgtgcaacatgaacacacagtgcccggatggcggctactgcatggagtatggc
gggagctacctctgtgtctgccacaccaactatggctccaaccacacgatgccatccccc
tgcgactcagagccctgcttgaatgggggatcctgcaaggttcatgatgactcgtacatc
tgcgagtgtcctcaaggcttccttggcgtgcactgcgagaaagccaagcctcggctctgc
agcacagggccctgccgcaacgggggcacctgcagggaggcgaatggcgagtaccactgc
acctgcccctaccgcttcaccggcaagcactgcgagatcggtaagccggacccctgtgcc
tcggggccctgccagaacggaggcacctgtttccactacatcggcaagtacaagtgtgac
tgtcccccaggctacaccggccggcactgcgagatcgtgccctccccttgctttcttagc
ccctgtgagaatggggctacctgtgaagacctcgatggaggctatgtttgcacctgctct
gtgggctatgtaggaaagcactgccaatttgaggttgactgtggcatacctagtgaggtg
aagcatgcccaggcttctttcaactccaccaaggtgggctcagtggctgaataccagtgt
gagctgggctacatcctcagccagcacaaccatccccgtgtctgccgtgtgccaggtgtc
tggagcgacccccccgaatgtgatgagattgatgagtgccagtcgcagccctgcctgaac
ggtggccagtgcaaggatcgtgtctctgccttcctgtgcttgtgtgagccaggttacacc
ggctaccactgcgagttggacgttgatgagtgccagtcggagccctgcaagaacagcggg
acctgccaagacctccccgggtcctttgcttgcttctgtcctgagggcttcctggggacc
cagtgtgagacagaagtggatgcctgtgagtcagacccttgccgaaatggaggggagtgt
gagagctacgggggctcctacctttgtgtgtgcccagagggtttcttcggctaccactgt
gagacagccagtgacccgtgcttctccagcccctgtgggagcagaggctactgcctgccc
agcaatggcacccacagctgcacctgcaaagtcagctacacaggcaagaactgcgaaaaa
gaattgctgccaccaacctcattaaaggtggaaagggtggaggacactggtgtgttgatt
tcttggcacccacctgaggacgcagctgccaggcaactcattgacggctacgccgtgacg
tacgtatccctcgacggctcttaccgcaggacagattttgtggaccgaagtcgttctgcc
caccaattgcgggcactaacctccggcagagcctacaatatttctgtcttttcagtcaaa
cgcaacgtgaacaacaagaatgatatcagcaggcccatcatgctcaccacgcgcactaga
ccgcgcccggtggaaggctttgagatcaccaatgtgactgccagcgccatcacggtgcaa
tgggccctccaccgcctccagcactccactgtcagtagggtgagggtctccatccgccac
ctgggggacctggcagcccgcaccgtggagctgaacagcagcgtggccaagtacaccttc
ctggacctgcagccaggagagagatacatcatccatgtcacaacgctgagcggcctggga
gtggaagaccacccctcagagagcctggccacacccccttttcatgtgtggacaaggcct
ctccccccacaaaacctcactgcctcccatgtcaccgccacctctgtgtccatggcgtgg
gagcagccgcctgccggcaccatggaggggtacatcatcaatgtcaccactgctcagagc
gtcaagagccgctacgtgcctaacgggaaactcgtgtcctacacggtgcgggacctgctg
cccgggcagcgctaccacctgtccctgacagctgtgcagaacaccgagcagggccaggtg
cacagcgagcccatccacctctatgtcaacaccttgcagagggatggggctccagagaga
aggtggagccaagctgggcacccgcgggttctgcggaacaggctgcccccagctttcctg
ccggagctccgcctgctggcagaccgtgacacagctgaggagccctcgccagcccccagg
ttcacggagctggtggatggcagagggaggatcagcgccaggtttggcactgcgctggga
aaatccatcactctgaagacacagccagaggctccagtgaggctggagaacacagaggtg
tccagctgggacagcctggcactgcagctgcgtgaggcaaagagcaagagagaggggcag
aagtgctccaagaatccctgcaggaatggaggcacctgcaccagagatgaggagtcctac
cactgtgcctgccgcccgggcttcaagggccggctctgccagctggcctgcaagaaggtg
ccacactcgtgcacgcggctgtactcggaaaccaggtcattcccagtgtgggaaggaggc
acctgccactatctgtccaggagagtctacaaggtacaccaggacatctgctacaaggag
agctgtgagagcaccagttctgagaggacaagcagcaggtacagcacacagcagcagaaa
gccaagcaacagtcacacactgaagaagccatagaaggtttaaagcagtag
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