Ficedula albicollis (collared flycatcher): 101816851
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Entry
101816851 CDS
T02815
Symbol
EXOSC2
Name
(RefSeq) exosome component 2
KO
K03679
exosome complex component RRP4
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101816851 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101816851 (EXOSC2)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101816851 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101816851 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
EXOSC1
Motif
Other DBs
NCBI-GeneID:
101816851
NCBI-ProteinID:
XP_005055626
UniProt:
U3JFF4
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All DBs
Position
17:7051372..7055513
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AA seq
294 aa
AA seq
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MAAVTRGLPAVREPLDSGARRGGEKHLVAPGDTITTDTGYMRGHGTYVEDDKLIASVAGV
VERVNKLVCVRALKARYNGEIGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTSNLEPVPLSDREVISRLRN
CIVALVTHKMMLFDTSILYCYEASLPHQIKDILKPEVTEEIVLEARQRLLDLEG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtcaccagggggctgccggcggtccgcgagcccctggattccggcgcccgc
cggggcggcgagaagcacctggtggcaccgggggacacgatcaccacggacacgggatac
atgaggggccacggtacttatgtggaggacgacaagctgatcgcctcggtggccggcgtg
gtggagagggtgaacaagctggtgtgtgtcagggcgctgaaggccaggtacaacggcgag
atcggcgacatcgtggtcgggaggattacggaggttcagcagaagcgatggaaagtggaa
acaaattccaggctggattcagtcctgttgctgtcgtctataaatttacctggtggggag
ctgagaaggaaatcagcagaagatgagcttgcaatgagggactacctgcaggaaggggat
ctcatcagtgcagaggtgcaatctatattttctgatggggctgtatcactacacacccgg
agcctgaagtacgggaagcttggccagggtgtgctggttcaggtctctccctcccttgta
aaacgccagaagactcattttcatgacctgccctgtggtgcatccgtgatccttggcaac
aatggcttcatctggatctacccaactccggagcagaaggatgatgaggctggaggctac
acctccaacttggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaac
tgcatcgtggctctggttactcacaagatgatgctctttgacaccagcatcctgtattgc
tatgaagcttcccttcctcatcagatcaaggacattctcaaacctgaggtgacagaggag
atcgttctggaagctcgacagaggctactggatttggagggatag
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