Ficedula albicollis (collared flycatcher): 101816928
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Entry
101816928 CDS
T02815
Symbol
IFT88
Name
(RefSeq) intraflagellar transport 88
KO
K16474
intraflagellar transport protein 88
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fab03037
]
101816928 (IFT88)
Cilium and associated proteins [BR:
fab03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
101816928 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_14
TPR_8
TPR_16
TPR_6
ANAPC3
TPR_11
TPR_10
ARM_TT21_4th
TPR_17
TPR_9
TPR-S
TPR_CcmH_CycH
ARM_TT21_5th
TPR_15
ARM_TT21_C
HEAT_Nup120
DUF2989
TPR_21
HAT_PRP39_C
NatA_aux_su
Coatomer_E
DUF6584
DUF2225
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
101816928
NCBI-ProteinID:
XP_005038158
UniProt:
U3K267
LinkDB
All DBs
Position
1:complement(75857391..75901126)
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AA seq
815 aa
AA seq
DB search
MMQNVHPAPEKNEDDLYSGYNDYNPMFDTEDLENDVAFQQAARTSHGRRPPVTAKIPGTS
SPRPLATGFGSKATLTSSMGRPMTGAIQDGVSRPMTAVQAAGYTKATVRGSSFDPLGQAK
GPASPLEKKTSDSLEEKMRQLEKKVNDLVEESCVANSCGDLKLALDRAKEAGRQERELLR
QREQITPPESINLDLTYTVLLNLASQYVANEMYAEALTTYQVIVKNKMFSNGGILKVNMG
NIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGVAFIKTGQYVDAISSFEEIMS
ISPNLKAGFNLILCYFAIGNGEQMKKAFKNLIEVPLEVDYEEKYISLNEDLHTNLLIEAI
KNDSLSQIERERKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDAVKASHYVELANDLEI
NKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYLGNELEQATNYADLAVNS
DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSLCTEALYNLGLAYKKLNRIDEALD
CFLKLHAILPNSAQVLYQLASIYQIMEDPNQAIEWLVQLISVVPTDPHVLSKLGNLYDTE
GDKSQAFHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLM
VASCYRRSGNYQKALEKYKIIHRKFPENVECLRFLVRLCTDMGLKEVQEYITKLKKAEKL
KEIREQRVKSGRDGSARSRKEGSDTGGTKGERLSAKLKALPGTSEPYESSSNKEIDASYT
DPLGPQPERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatccagctcctgagaaaaatgaagatgatctctattctggctac
aatgattataatcccatgtttgacacagaggatttagaaaatgatgtagcttttcagcag
gcagcaagaacaagtcatggaaggagaccccctgtgacagccaaaattcctggtacttca
agtccaagacctctagctactggatttgggtcaaaggcaactttaacttcatctatggga
agacccatgacaggagctatacaggatggggtttctcgaccaatgacagcagtgcaagct
gcaggttacactaaagcaactgtgagaggttcttcgtttgatcctcttggccaagcaaaa
ggtcctgcttcacctctggaaaagaaaacttcagacagtttagaagagaagatgaggcag
ttggaaaaaaaagtgaatgatttggttgaagaaagctgtgttgccaatagctgtggagac
ttgaaattggctctggacagggcaaaagaggctggaagacaggaaagagaattgttgaga
caacgtgaacaaatcactcctccagaaagcatcaacttagacctcacttacacagttctc
ctcaatctggccagtcagtatgttgctaatgaaatgtatgctgaagcgctgactacttac
caagttatagtgaagaataagatgttcagcaatggaggtatactgaaggtaaatatggga
aatatatatttaaaacaacggaactattccaaagctatcaaattctaccgtatggctcta
gaccagattactagttctcacaaacagatgaggataaaaataatggaaaatattggagtt
gcatttattaaaactggccaatacgttgatgccatttcttcatttgaagaaataatgagc
atatccccaaacctgaaggcaggcttcaacctgattctctgttactttgctattggaaat
ggtgagcaaatgaagaaagccttcaaaaacctcatcgaagttcccttagaagtggattat
gaagaaaaatacatttcattaaatgaggatctacatacgaatctactgattgaagccatt
aaaaacgacagtttaagtcaaatagaacgtgaaaggaagtccttggcagaggaatacatc
atgacagctgctaaactcattgcaccagcaattgagacatcttttgcagtaggctatgac
tggtgtgttgatgcagtgaaagcctcccactatgtagagttagccaatgatctggaaata
aacaaagccactacttacttgaggcaacagaattttaaccaggcactggagactttgaaa
atgtttgaaaaaaaggacagcagagtaaagagtgcagctgcaacaaacctttcattcctt
tattatttggggaatgaattggaacaagcaactaactatgcagatttagctgtaaattct
gataggtacaatccagcagctctaactaacaaaggaaatactgtttttgcaaatggagac
tatgaaaaagcagctgaattttataaggaagctctcaggaatgattccttatgcactgaa
gcactttataatcttggtttagcttacaagaagttaaacaggatagatgaagctttggat
tgttttctgaaactccatgcaatccttccaaatagtgcccaagtcctttaccagctagca
agcatataccagatcatggaagatcccaatcaagccatagagtggctggtgcagttgatc
agtgtagtaccaactgatcctcatgtgctttcaaagctagggaatttatatgacactgaa
ggtgataaatcccaagcctttcattattactgtgagtcataccggtatttcccttccaac
attgaggtcattgagtggcttggagcatattacattgacacccagttctgtgaaaaagcc
attgagtactttgaaagggcagcacttatcctgccaacacaagtgaagtggcagctgatg
gttgccagttgctacaggagaagcggcaactaccagaaagctctggagaaatacaaaatc
attcacagaaaattcccagagaatgttgaatgcctgcgatttttagttcgtctctgcaca
gacatgggtctgaaagaagtccaggaatatataacaaagctcaagaaagcagaaaaatta
aaagaaattagagagcagcgtgttaaatctggcagagatggcagtgcacgtagccgcaaa
gaaggaagtgatactggtggtaccaaaggggaaagactgagtgccaaactaaaagctctg
cctggaacaagtgaaccctatgaaagtagcagcaataaagaaatagatgcctcctacaca
gatccacttggcccacaaccagaaagaccaaaaacagcagcaagaaaaagaacagaggaa
gatgattttgctgatgaagaactaggagaggatctgcttccagaatag
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