Ficedula albicollis (collared flycatcher): 101816939
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Entry
101816939 CDS
T02815
Symbol
RPRD1A
Name
(RefSeq) regulation of nuclear pre-mRNA domain containing 1A
KO
K15559
regulator of Ty1 transposition protein 103
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101816939 (RPRD1A)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101816939 (RPRD1A)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
101816939
NCBI-ProteinID:
XP_016152125
UniProt:
A0A803V0D5
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Position
2:88184053..88226290
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AA seq
311 aa
AA seq
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MSAFSEAALERKLSELSNSQQSVQTLSLWLIHHRKHSALIVSVWERELRKAKPNRKLTFL
YLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSESDESCKKHLGRVLSIWEERSVYEND
VLEQLRQALYGDRKVRKRTYEQIKVDENNCSPRSSPTDPPQTTDLIRALQELENAASGDA
AVHQRIASLPLEVQDVSLLDRITDKESGEQLSKMVDDACMLLADYNGRLAAEIDDRKQLT
RMLSDFLRCQKEFLAEKEHKLEEYKRKLARVSQVRKELRSRIQNLPDLSRLPNVTGSHVH
LPFAGDIYSDD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcattctcggaggcggcgctggagcggaagctgtcggagctgagcaactcgcag
cagagcgtgcagaccctgagcctgtggctcatccaccaccgcaagcactcggcgctcatc
gtcagcgtgtgggagcgggagctgcgcaaagcaaagccaaataggaagctgacattcttg
tacttggccaatgatgtcatacagaacagcaaaaggaaaggaccagaatttacaaaagac
tttgctccagtaatagtggaagcttttaagcatgtttcaagtgagtctgatgagagttgt
aagaaacaccttggccgagtgctgtctatttgggaagaaaggtctgtttatgaaaatgat
gtattagaacaacttaggcaagctttgtatggagacagaaaggtgaggaagcgcacatat
gaacagatcaaagttgatgaaaataactgttcacctcgaagttctcccactgatcctcct
cagaccacagatctcattagagcattacaagaactagaaaacgctgcctctggggatgca
gcagttcaccagagaatagcttccttgcctctagaggtccaggatgtgtccttgttagac
agaataacagacaaggagtctggagagcaactttccaaaatggtagatgatgcatgtatg
ttgctggcggattacaatggcaggttggcagctgaaatagatgatagaaagcagctaact
cgaatgttatcagactttctccgatgtcaaaaagagttccttgcagagaaagaacataag
ctggaagagtacaaacgcaagttagccagagtgtcccaagtacggaaagaactcaggtca
cgcatccagaacctgcctgatctctctcggcttcccaacgtcacaggcagtcacgtacac
ctaccgtttgcaggagacatctacagtgatgattga
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