Ficedula albicollis (collared flycatcher): 101817157
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Entry
101817157 CDS
T02815
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
101817157 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101817157 (IRF1)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
101817157 (IRF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
101817157
NCBI-ProteinID:
XP_016157048
UniProt:
A0A803V075
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Position
13:16196647..16203651
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AA seq
318 aa
AA seq
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MPVSRMRMRPWLEMQIDSNQIPGLIWINKDKRIFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKEGEKDPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAVRVYRMLPPLTKHQK
KERKSKSSREARNRSKRMCFEETRLKESAESLTNTPLPDDHSGYTIHEYAGQEVEVESTA
ITLGLSPCKVSSSLPDWRPAMEVTVADSTNDLYQLQVSPLASSSEVTDEDEEEINPDIFK
LLGPAQDWHNTSIGGKGFLTNESGTQSLCSTYSFKEEDVDSDTMSGEMDFRFFDQKSSLD
FSWLDTVRPTMQVIPCGL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtccagaatgcgcatgaggccctggctggaaatgcagattgattccaatcaa
ataccaggactgatatggattaacaaggataagaggatatttcaaatcccatggaaacat
gcagctaagcatggctgggacatggagaaggatgcctgccttttcaggagttgggccatt
catacaggaaggtataaagaaggtgagaaagatcctgatccaaaaacctggaaggcaaat
ttccgctgtgccatgaattccctgcctgacatcgaagaagtgaaggataaaagcatcaac
aagggctccagtgctgtcagggtttacaggatgctgccacccttgacaaagcatcagaag
aaagaaaggaagtcaaagtcttcaagagaagcaagaaacaggagcaagagaatgtgtttt
gaagagacgaggctgaaagagtcagcagaaagcttaaccaacactcccttgccagatgac
cacagtggctacaccattcacgagtatgcagggcaggaagtggaggtggagagcacagcc
atcaccttaggcctgtccccctgcaaggtgagcagctccctgcctgactggaggccagca
atggaagtcaccgtggctgacagcaccaacgacctctaccagctccaggtgtctcccctg
gcttcatcctctgaagtcacagatgaagatgaagaggaaataaatccagatatttttaag
ctgcttggaccagcccaagattggcacaacaccagcattggggggaaaggctttctcacc
aacgagtcaggcacccagagcctgtgcagcacctacagcttcaaggaggaggatgtggac
agtgacaccatgtcaggagagatggatttcaggttctttgaccagaaaagcagcctagac
ttctcctggctggatacagtgaggccaaccatgcaagtcattccctgtggattgtaa
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