Ficedula albicollis (collared flycatcher): 101817166
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Entry
101817166 CDS
T02815
Symbol
CUX1
Name
(RefSeq) cut like homeobox 1
KO
K09313
homeobox protein cut-like
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101817166 (CUX1)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
101817166 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
Motif
Other DBs
NCBI-GeneID:
101817166
NCBI-ProteinID:
XP_005056531
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Position
19:4896899..5143222
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AA seq
1535 aa
AA seq
DB search
MAANVGSMFQYWKRFDLQQLQRELDTTATILANRQDESEQSRKKLIEQSREFKKNTPEDL
RKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMH
DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQ
NDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEI
EMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLE
VELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQA
DYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGS
ARRKGKDQPESQRPATLPASPPSQLLRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASPS
LPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFPTGPYSTNSISSQSPLQQSPDV
NGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEI
LARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRR
NGSEGNITTRIRTTESGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSI
LQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSS
VTDSSISALQNLSGLKKEPQEAPVLELHGISDSAQGMLRHVKNELGRGGVWKDHWWNTVQ
HERRNAALPEDIKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSEL
SMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEK
LAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVL
PAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQ
QPCPAIETSKDGKSQESSEPPASESQSATPLPLSGHSALSIQELVAMSPELDTYGITKRV
KEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNV
EKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQGASPQPQHQLKKPRVVLAPEE
KEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQSQ
AGSSDSPSARSSRAAPSSEGDSCDGVDAEGPPDGKASGPEADELSSAAAKSQGGPPSRLR
RPAEPASEAGEEALRGARPSERAEPESLEDTDDEGRPRQSSPPRPGDAPETLPNSATEGD
ASTSAASTSVLTGESSYKSKESSEKSSSVPSTSSTPAAGSQKTNSLQSLFGFSEAASSRN
TRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctg
cagagagagctcgataccacagcaacaatattggcgaaccggcaagatgaaagtgagcag
tccaggaaaaaacttattgagcaaagtcgtgagttcaagaaaaacactccagaggacctg
cgcaaacaggtagctccactactgaagagtttccagggagagattgatgcattgggtaaa
cgaagcaaagaagcagaggcagccttcttgaatgtttataagagattaattgatgttcca
gatccggttccagccttggatttaggacagcagcttcagctgaaggttcaacgcatgcac
gatattgaaacagaaaaccagaaacttagggaaactctggaggaatacaataaggaattt
gccgaggtgaaaaatcaggaggttacaataaaagcacttaaggagaaaatccgagaatat
gaacagaccctgaagaaccaagcagagaacatagcccttgaaaaggaacaaaagttacaa
aatgattttgcagagaaggagagaaaattgcaggagacccagatgtcaacagcctcgaag
ctggaggaagcagaacacaaagttcaagctttgcaaacagccttggaaaaaaccaggaca
gaactatttgatctgaaaacaaaatatgatgaagaaactactgcaaaggctgatgaaatt
gagatgatcatgacagaccttgaaagagcgaatcagagggcagaggtggctcagagagag
gcagagaccttaagggagcagctctcatcagctaacaaatctctccaacttgctacgcag
atccagaaggcacctgatgtggagcaggccatcgaggtgctgactcgctccagcctggaa
gtggagctggcggcgaaggagcgcgagatcgcccagctcgtggaggatgtgcagaggctc
cagggcagcctcaccaagctgagggagaactccagcagccagatctcccagctggagcag
cagctgacagccaagaacagcacactcaaacaactggaagaaaaactgaaaggacaggct
gattatgaagaggttaagaaagaattaaatatattgaaatccatggagtttgcaccatct
gaaagctctggtgcacaggatgcatccaagccgctggaggtgctgctgctggagaagaac
cgctcgctgcagtcggagaacgccacgctgcgcatcaccaacagcgacctgagcgggtca
gccaggagaaaagggaaagaccagcctgagagtcagcgtcctgcaaccttgccggcctcc
cctccttcccagttgctccgcaacgcgggggagcaggcttccaatactaatggtacacac
cagttctcaccaacgggtttaagtcaagactttttcagctcatccctggcgagccccagc
ttacccctggcctccacaggaaaatttgcactaaactctctcctccagcgacagctaatg
cagtccttctactccaaggcaatgcaggaagcaggaagcacaagcatgatttttccaaca
ggtccatacagcacaaactccatatcttcccaaagtccattacaacaaagcccggatgta
aatggcatggccccatctcccagccagtcagaaagtgctgggagcatctctgaaggagag
gagatagacacggccgaaattgcacgtcaggtgaaagagcagttgatcaagcacaatatt
ggacagcggatatttggacattatgtgttgggactgtctcaagggtctgtgagtgagatc
ctggcccggccaaagccatggaataaactgactgtgagaggcaaggagccatttcataag
atgaagcagttcctgtcggacgagcagaacatcctggctcttcgcagcatccagggcaga
caaagagagaatccaggccagaacctgaacagactatttcaggaagtaccgaaacgaaga
aatgggtctgaaggtaacataaccacacgaatccgaaccacagagtctggctctgatgaa
gccatcaaatccattcttgaacaagccaaaagggagctgcaagtacagaaaacagctgag
ccggctcagccgccttctgcctctagcagtggcaattctgatgatgcaattcgatccatt
ctgcaacaagcccgacgggaaatggaggcacagcaggctgcccttgaacctgccttaaaa
acaccacctctatctcaagctgacatttctatcctgtcccccaaactagtgtctacacct
gcaatgtcttcggtttccagctattctcctttggccatatccctgaagaaacattcatct
gtcactgattccagtatctctgcattgcagaacctctctgggctcaaaaaggagcctcag
gaggcacctgttttagagcttcatggaataagtgattctgcccagggtatgttgaggcat
gttaaaaatgagttgggacgtggtggtgtttggaaggaccattggtggaatactgtgcag
catgagagaagaaatgcagctcttcccgaagatataaaagttgaggaagccagtggtgga
aaagaaaaggtcagcaatcagactaggccagatcgtagccagctccaaggaccgtcttct
tccgagtattggaaagagtggccaaacgcggaatctccgtactcgcagagttctgaattg
agcatgactggggcgagtcgcagtgagacaccacagaatagccccctcccttcatcccct
atcgtgtccttgtccaagccatccaaaccttcggttcctccactgacacccgagcagtat
gagatttatatgtaccaggaggtggatacgatagagctaacgcggcaggtcaaggaaaag
ctagcaaagaatggcatctgccaaaggatctttggggaaaaggtattggggctgtcccaa
ggaagtgtcagtgacatgctctccaggccaaagccatggagcaaattgacccaaaaaggc
cgagaaccatttattcgtatgcagctctggttgaatggtgagctgggacagtgtgtcctg
cccgcacaagggcagcaacaaggacaagtccttcactctgtgacatcattacaggattcc
ctacagcagggatgtgcaagctcagaaagtactccaaagacttctgccagttgcagtcct
gctcctgaatctcccatgagttccagtgaatcagtgaaaagcctgactgagttggtacag
cagccctgtcctgccatagagacgagtaaggatggcaaatcccaggaatccagcgagcca
cctgcatctgaatcccaatccgccacccctctgccactctcaggccactcagcactcagc
atccaggagctggtggccatgtcccctgagctggacacctatggcatcaccaagagggtc
aaggaagtgctcacggacaacaatcttggtcagcgtttgttcggggagacaatcctgggg
ctgacacaaggctctgtctcagacctgctggctcgccccaagccctggcacaagctgagt
ctgaagggaagggagccctttgtccgcatgcagctgtggctcaacgatcccaacaacgtg
gagaagctgatggatatgaagcgcatggagaaaaaagcctacatgaagcggcggcacagc
tcggtcagcgacagccagtcctgcgagtcctcgtccgctggcatcgactacagccagggc
gccagcccccagccccagcaccagctcaagaagcccagggtggtgctggcaccagaggag
aaagaagctctcaaacgagcctaccagcaaaagccatacccatcaccaaaaaccattgag
gaactcgccacgcagctcaacttgaaaaccagcaccgtgatcaactggttccacaattac
aggtcccgcatccgccgggagctgttcatcgaggagatccaggccgggagccagagccag
gcggggtccagcgactcgccttcggccaggagcagcagggcggcgcccagctccgagggg
gacagctgcgacggcgtggacgccgagggccctcccgacggcaaggccagcggccccgag
gcggacgagttgagcagcgcggccgccaagtctcagggagggccgccgagccggcttcgg
aggcccgcggagccggcttcggaggcgggggaagaggcactgcgaggggccaggccctcg
gagagagcggagcccgagagcctggaggacaccgacgacgagggccggccgcgccagagc
tccccgccgcgcccgggagacgctccggagacactgccaaactctgccacggaaggggat
gcctctacctcagctgcctccacctcagtccttacgggggagagctcctacaagtcaaaa
gaaagttcggagaaaagctccagtgtgccaagtacgagctcgacgccggccgcaggctcg
cagaaaaccaactctctgcagagcttgttcggcttctcggaggcggcgagctccaggaac
acgcgagacagctccctgaggaaaaagaaagcggccaacttgaacaacatcatccaccgc
ttggagaaggccgccagtcgggaagaggccgtggagtgggagttttga
DBGET
integrated database retrieval system
