Ficedula albicollis (collared flycatcher): 101817306
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Entry
101817306 CDS
T02815
Symbol
MEX3D
Name
(RefSeq) mex-3 RNA binding family member D
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101817306 (MEX3D)
04121 Ubiquitin system [BR:
fab04121
]
101817306 (MEX3D)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101817306 (MEX3D)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101817306 (MEX3D)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101817306 (MEX3D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_BICC1_1st
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
101817306
NCBI-ProteinID:
XP_005060021
LinkDB
All DBs
Position
28:complement(960971..976588)
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AA seq
236 aa
AA seq
DB search
MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKR
EILSAAEHFSMIRATRNKVNGLAGALQGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKR
IQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHITMRTGSFVDVNADNDFHSNG
TDVCLELQGGAAAPWAKAPHAARRPSAAPRNDSLSSLGSGSAESFYGGGVSGNYRP
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagtgcgtgcccgtgcccagctccgagcacgtcgccgagatcgtgggccggcaa
ggctgcaaaatcaaagccctgcgtgccaagaccaacacgtacatcaagacgccggtgcgg
ggcgaggagcccgtgttcatcgtcacgggcaggaaggaggacgtggagatggccaagcgc
gagatcctctcggccgccgagcacttctccatgatccgggccacgcgcaacaaagtcaac
gggctggcgggagcgctgcaggggccgcccaacctgccggggcagaccaccatccaggtg
agggtgccctaccgcgtggtggggctggtggtgggccccaagggcgccaccatcaagcgc
atccagcagcagacgcacacgtacatcgtgacgccgagccgcgacaaggagcccgtgttc
gaggtgacgggcatgcccgagaacgtggaccgggcgcgcgaggagatcgaggcgcacatc
accatgaggacgggctccttcgtcgacgtcaacgccgacaacgacttccactccaacggc
accgacgtctgcctggagctgcagggcggcgcggccgcgccctgggccaaggccccgcac
gccgcccggcgcccctcggccgcgccgcgcaacgacagcctcagctcgctgggcagcggc
tccgccgagtccttctacggcgggggggttagcggcaattaccggccataa
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