Ficedula albicollis (collared flycatcher): 101817324
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Entry
101817324 CDS
T02815
Symbol
COL14A1
Name
(RefSeq) collagen type XIV alpha 1 chain
KO
K08133
collagen type XIV alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
fab00535
]
101817324 (COL14A1)
Proteoglycans [BR:
fab00535
]
Extracellular matrix (ECM) proteoglycans
Others
101817324 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
vWA_SIBA-E
VWA_3
Motif
Other DBs
NCBI-GeneID:
101817324
NCBI-ProteinID:
XP_005042498
LinkDB
All DBs
Position
2:144426448..144552440
Genome browser
AA seq
1925 aa
AA seq
DB search
MVLQHLMETCSRRASGYELSLKITEFQRLADTVCIEGKKMLGRHEIQSCFLLAFLSVTTF
LISDVQGQVSPPTRLRYNVVSPDSVQISWKAPKGQFTGYKLLVTPSSGGKTNQLILQNTA
TKAIIQGLIPDQTYALQIIAFSEDKESKPAQGQFRIKDIERRKDTSKSKVKDPEKTNASK
PAPEGSLFTCKTPAIADIVILVDGSWSIGRFNFRLVRLFLENLVSAFNVGSEKTRVGLAQ
YSGDPRIEWHLNAYGTKDAVLDAVRNLPYKGGNTLTGLALTYILENSFKPEAGARPGVSK
IGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADINELKEIASEPDSTHVYNVADFN
FMHTIVEGLTRTVCSRVEEQEKEIKGAIASLGTPSDLVTSEVTARGFRVSWTHAPGKVEK
YRVVYYPTRGGQPEEVVVDGSVSTAVLKNLMSLTEYQIAVFAIYSNAASEGLRGTETTLA
LPMASDLQLYDVSQSSIRVRWNGVPGATGYMILYAPLTEGLAADEKEIKIGETSTDLELD
GLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPANLKFSDVGHNSAKLSWDPASKNV
NGYRIMYVKTDGTETNEVEVGRVSTHTLKSLAPLTEYTVAIFSLYDEGQSEPLTGSFTTK
RVPAPQHLEIDEASADSFRVSWKPTSSDIAFYRLAWIPLDGGESEEVVINGDADSHVIEG
LLPDTEYEVSLLAVFDDETESEVVAILGATTASATTVPSTVSTTSTTTPEPSTAVLRTGV
RNLVIDDETTSSLRVTWDISDYSAQQFRVTYLTAEGGRAEEAVRMVMVPGRQNTLLLHPL
LSDTEYKITITPIYSDGEGVSVSAPGKTLPLSAPRNLRVSDEWYNRLRISWDAPPSATMG
YRVVYKPVNTPGPALETFVGDDINTILILNLLSGTEYSVKVFASYSTGFSDALTGVAKTL
YLGVTNLDSYQVRMTSLCAQWQLHRHATAYRVVIESLEDGKKQEVNLGGGTPRHCFFELM
PGTKYKISVHTQLQELEGPAVSIMETTLPFPTQPPTTPSTPPPPPTIPPAKEVCKAAKAD
LAFLVDGSWSIGDDNFNKIINFLYSTVGALDKIGPDGTQVAIIQFSDDPRTEFKLNAYRT
KETLLEAIQQIAYKGGNTKTGKAIKHARENLFTGEAGMRRGIPKVLVVITDGRSQDDVNK
VSREMQLDGFTFFAIGVADADYSELVNIGSKPSERHVFFVDDFDAFTKIEDELITFVCET
ASATCPLVVKDGNNFAGFKMMEMFGLVEKEFSAVEGVSMEPGTFNVFPCYRLHKDALVSQ
PTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILNEAYEPLVGVILDNGGKTLTFFN
YDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVISKTTAKIIIDCKEVGEKTINAAGNISSD
GIEVLGRMVRSRGPRDNSAPLQLQMFDIICATSWANRDKCCELPGLRDEENCPALPHACS
CSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPKGPDGPRGEIGVPGPQGPPGPQGPSGLS
IQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPGRDGAQGQRGFPGKDGPTGPQGPPGPMG
IPGAPGVPGVTGSQGPQGDVGAPGPPGAKGERGERGDLQSQAMVRAVARQVCEQLIQGHM
ARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQGEQGSPGMQGFPGSPGQPGRPGER
GLPGEKGEKGNPGVGTQGPRGPPGSTGPPGESRTGSPGPPGSPGPRGPAGHTGSPGSQGP
AGPPGYCDPSSCAGYGLGGGYGEPTDQDIPVVQLPHNSYQIYDPEDLYDGEQQPYVVHGS
YPLPSPYSQSYPSPHLAQAEFTPVQEEMEAVELRSPGISRFARRIAKRSARTPERTRANG
KSPPQ
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcagcacctgatggagacctgctcaaggagagcttctgggtatgagctgagc
ctgaagattacagagtttcaaagacttgctgatactgtgtgtattgaggggaagaagatg
cttggtcgacacgagatacagagctgttttctcttggcatttctatctgtcacaactttt
ttaatcagtgatgtccagggccaagtgtccccaccaacaagactaagatataatgtagtg
agtcctgacagtgtacagatctcttggaaagcccctaaagggcaattcactggatataaa
cttcttgtcactccaagctcaggtggaaaaacaaatcaattaattcttcaaaatactgca
accaaagcaattatccaaggtctcattccagatcaaacttatgcccttcagatcattgca
ttcagtgaagacaaggagagcaagccagcacaaggccagttcagaattaaagacatagag
agaagaaaagatacaagtaaatccaaggtgaaggatccagaaaaaacaaatgcgagtaaa
ccagctccagaaggaagcctgtttacctgtaaaactccagcaattgcagatattgtgata
ctagtagatggttcttggagtattggcagattcaatttcaggctcgttcgactgttcctg
gaaaacctggtttctgctttcaatgtgggatctgagaaaacaagagtaggtcttgcacag
tacagtggtgacccccgaattgagtggcacttgaatgcctatggcaccaaggatgctgtt
ctggatgcagtccgtaatctgccttataagggagggaacacattaacaggtcttgcctta
acttacattttggaaaacagctttaagcctgaagcaggtgcaagacctggagtatctaaa
attgggatactgatcactgatgggaagtcccaagatgatgtcatccctcctgctaaaaac
ctgcgggatgctggcattgagctgtttgctattggtgtaaagaatgcagatataaatgaa
ctcaaagagattgcctctgagcctgacagcacacacgtctacaacgtggctgacttcaac
ttcatgcataccattgttgaaggtcttaccagaacagtgtgctcacgagtagaggagcag
gaaaaggaaatcaaaggagcaattgcttctcttgggactccttcagatttggtcacttcg
gaggtaacagccagaggcttccgggttagctggacccatgcaccaggcaaagtggaaaaa
tacagggttgtgtactaccccactcgaggaggacagccagaagaggttgtggtagatgga
agtgtgtcaacagcagttttgaaaaacctgatgtctttaactgagtaccagatagctgtg
tttgctatctactccaacgctgccagtgagggcctccgaggaacagaaaccacacttgcc
ttgcccatggcgtcggacctgcagctctacgatgtgtcccagagcagcatcagggtgagg
tggaacggggtcccgggtgccacgggctacatgatcctctatgctcccctcactgaagga
ttggcagcagatgagaaggagataaaaattggtgagacctcaacagatcttgaactggat
ggactattgccaaatacagaatatacagtcacagtttatgccatgtttggagaagaagct
agtgatccccttacaggacaagaaactacattgcctctaagtccaccagcaaacttgaaa
ttttctgatgttggacacaatagtgctaagctatcatgggatcctgcttccaaaaacgtg
aatggctatcgcatcatgtatgttaaaacggacggaacagaaaccaacgaggttgaagtt
ggtcgtgtttcaactcatactctgaaaagtttggcacccctcacagaatatactgttgct
attttctccctgtatgatgagggacaatctgagccacttactggcagctttaccacaaaa
agagttccagctccccagcatttggaaattgatgaagcatcagcagacagtttcagggtc
agctggaagcccacctcatcagatattgctttttacagactggcatggattcctttggat
gggggggaatctgaggaggttgtcataaatggagatgcagacagtcatgttatagagggt
ctgttgcctgacacagaatatgaagtttctctgctggcagtttttgatgatgaaactgaa
agtgaagttgttgctattcttggagctacaactgcaagtgctaccacagtaccttccacg
gtgagcaccaccagtaccacaacccctgagcccagcacagcagttcttcgaacaggagtc
agaaaccttgttatagatgatgaaacaacctcaagtctgagggtgacatgggacatttct
gactacagtgcccagcagttcagagtgacctatctcactgcagaaggcggccgtgctgag
gaagcagtaagaatggttatggtgcctggcagacaaaacactcttctacttcaccctctg
ctgtctgatacagaatacaaaattaccataacccccatctattcagatggggaaggagtc
agtgtctcagctcctggcaaaaccttgcccctgtctgctcctaggaatttacgtgtctca
gatgagtggtacaacagattacgtatcagctgggatgccccaccttcagcaacaatgggt
tacagagttgtctacaaacctgtcaacactcctggtcctgcattggagacctttgtaggg
gatgatattaataccattctcattctaaatctcttgagtggaacagagtacagtgttaaa
gtatttgcttcatactcaacaggcttcagtgatgccctaacaggcgtggccaaaaccttg
tatctgggtgtgacgaatttggattcctaccaagtccgcatgacaagtctgtgtgctcag
tggcagcttcacaggcatgctactgcttacagggtagttatagagtcacttgaggatgga
aaaaagcaagaagtaaatcttggtggaggcacgcctagacattgtttctttgagctgatg
cctggaaccaaatataaaatcagtgttcatacacagcttcaggagctggagggccctgct
gtgagcatcatggagacaacgttaccatttcctactcaaccaccaacaacaccttcaaca
ccacctccaccacctacaatcccacctgcaaaagaggtgtgcaaagcagccaaagctgat
ctggcattcctggtggatgggtcatggagtattggagacgacaatttcaataagataatt
aactttctctatagcactgttggagcgttggataagattggtcctgatggaacacaggtg
gcaataattcagtttagtgatgatcccagaacagaatttaaattgaatgcatacagaaca
aaagagactcttcttgaagctattcagcaaatagcctacaaaggaggaaatacaaaaaca
ggcaaagccattaaacatgcacgagaaaacttatttacaggagaggcaggcatgagaagg
ggcattccgaaggttttggtggtcattactgatgggcgatcacaggatgatgtgaacaaa
gtctccagagaaatgcaactagatggttttaccttttttgctattggagtggctgatgct
gactactcagagttagttaatattggcagcaagcccagtgaaagacatgtcttctttgtg
gatgactttgatgcctttacaaagattgaagatgaactgatcacttttgtctgtgaaact
gcatcagcaacctgcccactggtagttaaagatggcaataattttgcaggatttaaaatg
atggaaatgtttggtttggttgaaaaggagttttcagctgtggaaggggtttccatggaa
cctggtacatttaatgttttcccatgttacagactgcacaaggatgctctcgtctcccag
cctaccaagtatttgcatcctgaaggtctcccttctgattacaccatcacgtttctcttt
cggatactcccggacacaccccaggagccatttgccctgtgggagattttaaatgaagca
tatgaaccactggttggagtgattttagataatggtggaaaaactctgactttctttaac
tatgactacaaaggagattttcaaactgtaacttttgaaggtcctgaaataaggaagata
ttttatgggagttttcataagttgcatgttgtcatcagcaagaccacagccaagataatt
attgactgcaaggaagtaggtgagaagaccattaatgcagcagggaatattagttctgat
ggcatagaagtgctggggaggatggtgagatctaggggaccaagagacaattctgcaccg
ctgcagttacagatgtttgacattatttgtgctacctcatgggccaatcgagacaaatgc
tgtgaactgcctggcttgagagatgaggaaaattgtcctgcccttccccatgcttgttcc
tgttcagaagccaataagggtccccttggacctcctggaccaccgggtggtccaggtgtc
agaggtgccaaaggtcatcgtggtgatccaggtccaaagggaccagacggacctcgaggt
gaaattggtgttcctggaccacaaggacctcccggaccacaaggacccagtgggctttct
atccaagggcttccagggccaccaggtgaaaagggagagaagggagatcttggttttcct
ggcctgcagggtgtcccaggagcatcaggttcaccgggaagagatggagcccaaggtcaa
aggggctttcctggcaaggatggacccacaggcccacaaggacctcctggcccaatgggc
atacctggtgctccaggtgttccaggtgttactggaagtcaggggccacaaggtgatgtt
ggagctcctggtcctcctggagctaagggggaaagaggtgaacggggtgatctccagtcc
caagcaatggtccgggctgttgctcgtcaagtgtgcgagcagctcatccaaggtcatatg
gcaagatataactcgattctgaaccagattccaagccagtctgtctcaactcgaaccatc
gcggggcctcctggtgagccaggccggccaggggctccagggccacagggtgagcaagga
tctccaggcatgcaaggctttccaggaagccctggtcaaccaggaagaccaggagaaaga
ggtttaccaggtgagaaaggagaaaaaggcaatccaggtgttggaacacaaggaccccga
ggcccaccaggatccacaggacctccaggagaaagtcggacgggcagcccgggaccccca
gggtctccaggcccccgaggtcctgctggccacacggggtccccgggctcgcagggtcct
gctgggcctccaggctactgcgacccctcctcctgcgctggctacggcctgggaggtgga
tacggtgagccaactgatcaagacatcccagtagtgcagttgccacataactcctaccaa
atctatgaccctgaggacctttatgatggtgagcaacagccgtacgtagttcacgggtcc
tacccccttccatccccatactcccagtcctatccgtcacctcatcttgctcaagcagag
tttactcctgttcaagaagagatggaagccgttgagctgaggtccccggggatcagtcgc
ttcgcgaggaggatagccaaaaggagcgccaggacccccgagcgcacacgggccaacgga
aaaagccccccccagtga
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