Ficedula albicollis (collared flycatcher): 101817359
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Entry
101817359 CDS
T02815
Name
(RefSeq) pinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
fab04030
]
101817359
G protein-coupled receptors [BR:
fab04030
]
Rhodopsin family
Vision
Opsin
101817359
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
7tm_4
7TM_GPCR_Sru
7TM_GPCR_Srsx
YobI-ATPase
Motif
Other DBs
NCBI-GeneID:
101817359
NCBI-ProteinID:
XP_005056928
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Position
19:8765305..8770782
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AA seq
345 aa
AA seq
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MEALNSSSTPGPFDGPQWPHQGPRGLFVAAAVLMALLVAAASLLNGLVIAASLRHRRLRS
PLNHVLLNLAVANLLVTACGSSVSLASNIRGFFAFGERLCRLEGFMVSLTGIVGLWSLAI
LAVERYLVVCRPLGEFRFQHWHAATGCAFTWGWSLLWTTPPLLGWSSYVPEGLRTSCGPN
WYTGGSNNSSYILALFVTCFVMPLSLILFSYTNLLLTLRAAAAQQREADTTQKAEREVTR
MVVAMVVAFLTCWLPYTTFALVVATNKGIVIQPALASLPSYFSKTGTVYNPIIYVFMNKQ
FQSCLLEMLCCGHHPRGMGETSPAAPSPQVAAEGLRNKVTPSQPV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaggccctgaacagcagcagcaccccggggcccttcgatggcccgcagtggccgcac
cagggcccccgcggcctgttcgtggccgcggccgtgctgatggcgctgctggtggccgcg
gcctcgctgctcaacgggctggtcatcgccgcgtccctgcggcaccgccgcctgcgctcg
cccctcaaccacgtcctgctcaacctggccgtggccaacctgctggtgacggcctgcggc
agctccgtcagcctggccagcaacatccgcggcttcttcgccttcggggagcgcctctgc
cgcctcgagggcttcatggtgtccctgacgggcatcgtggggctgtggtccctggccatc
ctggccgtggagaggtacctggtggtctgcagacccctgggagaatttcggttccagcac
tggcacgctgccactggctgtgccttcacctggggctggtccctgctctggacaacccca
cccctgctgggctggagcagctacgtgcctgaagggctgagaacctcctgcgggcccaac
tggtacacggggggcagcaacaacagcagctacatcctggccctgtttgtcacctgcttt
gtgatgcccctgagcctgatcctcttctcctacaccaacctgctgctgaccctgcgggcg
gctgcagcacagcagagggaggcagacaccacccagaaggcagagagggaggtgacacgc
atggtggtggccatggtggtggccttcctcacctgctggctgccctacaccacctttgca
ctggtggtggccaccaacaagggcattgtcatccagccagccctggcatccctgccctcc
tacttctccaagacaggcactgtttacaaccccatcatctacgtcttcatgaacaaacag
ttccagagctgcctgctggaaatgctgtgctgtggtcaccacccccggggcatgggggaa
acctctccagctgcccccagtccccaggtggctgcagaggggctgaggaacaaggtgaca
ccatcccagcccgtgtga
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