Ficedula albicollis (collared flycatcher): 101817393
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Entry
101817393 CDS
T02815
Symbol
TAF2
Name
(RefSeq) TATA-box binding protein associated factor 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101817393 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fab01002
]
101817393 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101817393 (TAF2)
03036 Chromosome and associated proteins [BR:
fab03036
]
101817393 (TAF2)
Peptidases and inhibitors [BR:
fab01002
]
Metallo peptidases
Family M1
101817393 (TAF2)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101817393 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
101817393 (TAF2)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101817393 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1_N
Peptidase_M1
SR-25
RPN2_C
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
101817393
NCBI-ProteinID:
XP_016152346
LinkDB
All DBs
Position
2:complement(144240447..144302947)
Genome browser
AA seq
1242 aa
AA seq
DB search
MDLLVGSKSASHSVSRRYLHCPLQTLDISSHSISTKDRTTMFHVYCSVEKPFWLKGSFIT
THQVVCINNINFQRKSVVGYVELTIFPTVANLNRIKLNSKQCRIYRVRVNDLEAAFIYND
PTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKVPSELWKHVDELKVLKVHI
NFSLDQPKGGLHFVVPNMEGNMAERGAHVFSCGYQNSTRFWFPCVDSYSELCTWKLEYTV
DAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLAIGPFEILVDPYMHEVTHF
CLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFIDEAYVEVAAYASMSIFSTN
LLHSAMIIDETPLTRRCLAQALAQQFFGCFISRMSWSDEWVLKGISGYIYGLWMKKTFGV
NEYRHWIKQELDQIVAYELKTGGVLLHPIFGGGKEKDNPASHLHFSIKHPHTLSWEYYTM
FQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQSHMWSQMLVSTSGFLKSIS
NVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQDYTSPGTQKYVGPLKVTV
QELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEEVDMDLSAMDADSPLLWI
RIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALEKFPTPASRLALTDILEQE
QCFYRVRMLACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCKTCPNIVKTNNFMNFQSYF
LQKTMPVAMALLRDVHNLCPKEVLMFILDLIKYNDNRKNKFSDNYYRAELIDALANSVTP
AVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTITVSCLKAIRVLQKNGHVP
SDPALFKSYAEYGHFIDVRIAALEAVVDYTKVDRSYEELQWLLAMVQSDPVPYIRHKILD
MLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCGAVDLYFTLFGLSRPSCLP
LPELGLVLNLKEKKAVLNPTIIPESVANNQEPVNSTNNHGQSVGFQNTEDDHLIKETASS
ISGHQQGVKRKADMPLGSPLEPGQILEKNEDSKVKLKIRFSNSQEEEEIDMDTVHDSQAF
IYHHLNMLERPSTPGKEQSSGEINMHPVSTAPLSVFGKESNSSKHSDHHHHHHHEHKKKK
KKHKHKHKHKHKHDTKEKEKDPFVFSNSPASARSIRSPSLSD
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggacttactcgtgggcagcaagtctgccagccattcagtctcacgaagatatttacat
tgtcctcttcaaaccttggacatttcttcacatagtatcagtactaaagaccgtactacg
atgttccatgtgtactgctctgtcgagaagcccttttggcttaagggctcttttatcaca
actcatcaggtagtttgtatcaacaacataaattttcagagaaagtctgttgtaggttat
gtggaactgacaatatttcccacagttgcaaacctgaacagaatcaagctgaacagtaaa
cagtgcaggatttacagagtgagagtcaatgatttagaagcagctttcatctataatgat
ccaacactggaggtctgtcaccatgagtctaaacagaggaatctcaactatttctccaat
gcctatgctgctgctgtcagtgctgtggacccagatgctggaaacggagaactctgcatt
aaggttccctcggagctatggaaacatgttgatgagttaaaagtcctgaaggtgcatata
aatttttctctggaccagccaaaaggaggccttcattttgtggtacccaacatggagggc
aacatggcagaaagaggggctcatgtcttttcatgtggttatcaaaattctacaagattt
tggtttccttgtgtggattcatattctgagttgtgtacctggaaacttgagtatactgta
gatgctgcaatggtggctgtttcaaatggagatttggtggaaactgtatacacccacgat
atgagaaagaagacttttcattacatgttgactatcccaactgcagcttctaacatctcc
ttggcaattggaccttttgaaatccttgttgatccatacatgcatgaggtgactcacttc
tgcttaccacaacttctgccattgctcaaacacaccacatcctaccttcatgaggtgttt
gaattctatgaggagattcttacctgccgctatccttactcttgtttcaagacggttttt
atagatgaagcttatgtcgaagtagctgcttatgcatccatgagtattttcagcacaaat
ctcttgcacagtgcaatgattatagatgaaactccactgacaaggagatgcttggcacag
gccctggcccagcagttctttggatgtttcatatccagaatgtcctggtcagatgaatgg
gtgctaaagggaatctctggttacatttatggcctctggatgaaaaaaacctttggtgtt
aatgagtatcgccactggattaaacaggagttagatcaaatcgtggcatatgaactgaag
actggaggagttttactgcatccaatattcggaggaggaaaagagaaagacaaccctgct
tcccatttgcatttttcaatcaaacaccctcatacactgtcctgggaatattacactatg
ttccagtgtaaagcacatcttgttatgagactgattgagaacagaattagcatggagttc
atgctgcaggttttcaacaagttgttgagtctggccagtactgcttcatctcagaagttc
cagtcacacatgtggagtcagatgttggtttccacatctgggtttttgaaatctatctca
aatgtctcaggcaaagacatccaacctttaataaagcagtgggtggatcagagtggagtg
gtaaaattttatggtagctttgcatttaatagaaaacggaatgtattggaattggaaata
aaacaagattacacatctcctggaactcagaaatatgtgggtcctcttaaagtgaccgtg
caagaacttgatggctcattcaaccatacattgcagattgaagaaaacagtcttaagcat
gatataccttgccattctaaaagcagaagaaataagaagaaaaagattccactgatgaat
ggagaagaggtggacatggacctttctgctatggatgctgattcccccttgctctggata
agaatagatcccgatatgtcggtgctgaggaaggtggaatttgagcagtctgatttcatg
tggcagtatcagctgcggtatgagagggatgtggtggcacaagaagaagccattctggca
ttggaaaagttccctactcctgcatcccggctggccctgactgacatcctggaacaggaa
caatgtttctaccgggtgagaatgctggcctgcttctgccttgcaaagattgcaaattcc
atggtaagtacatggacaggaccaccagccatgaagtcactctttacacgaatgttttgt
tgtaagacttgtccaaacattgtgaagaccaacaacttcatgaactttcagagctacttt
cttcagaagactatgcccgttgccatggcccttctgagagatgttcacaacctttgtcct
aaggaggttttaatgtttattttggatttgatcaagtataatgataacaggaagaataag
ttttcagacaactactatcgtgctgagctgattgatgccctggccaactctgtgactcct
gcagtcagtgtgaacaatgaagttcgaacactggataacttaaatcctgatgtacgactt
attcttgaggaaattacccgttttctgaatatggagaagcttcttcccagttacagacat
actatcacagtcagctgtttgaaagctattcgagtgcttcagaagaatggtcatgtccca
agtgatcctgctctcttcaagtcgtacgcagagtacgggcacttcatcgatgtccgaata
gcagcgctggaggctgttgttgattataccaaagttgataggagctatgaagaattacag
tggctactcgctatggttcagagtgatcctgtaccctacataaggcataaaattttggat
atgctgactaagaatccacctttcaccaagaatatggagtcccccttatgtaatgaagct
ttggtagatcagctttggaaactgatgaattcaggaacttcacatgactggagattacga
tgtggtgctgtggacctctatttcacactctttggcctcagcagaccttcctgtttacca
ttaccagagcttggacttgttcttaacctgaaagaaaagaaggctgtactcaatccaaca
attatccctgaatcagttgcaaataatcaggaacctgtgaacagtactaacaatcacgga
cagtcagtaggatttcagaacaccgaggatgatcatcttattaaggaaacagcatccagc
atttctggtcatcagcagggggtgaagaggaaggctgatatgccactcgggtctccattg
gagccagggcaaatactagagaagaatgaagacagtaaagtcaaactcaaaatcagattc
tcaaactctcaagaggaagaggaaattgatatggacacagttcatgacagccaagccttc
atttaccatcatttgaatatgttggagagaccatccacaccaggtaaggaacaatcatct
ggagagataaacatgcaccctgtctcaacagctccactctctgtgtttggtaaagaatca
aactcctcaaaacacagcgaccaccatcaccatcaccaccatgagcacaagaaaaagaag
aagaaacacaagcataagcataaacataaacataaacatgatactaaagaaaaggaaaag
gatccctttgttttctctaacagtccagccagcgcacgatcaatccgttccccatcactt
tcagactga
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