Ficedula albicollis (collared flycatcher): 101817404
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Entry
101817404 CDS
T02815
Name
(RefSeq) nyctalopin-like
KO
K08129
nyctalopin
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
fab00535
]
101817404
Proteoglycans [BR:
fab00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
101817404
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_14
LRRNT
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
101817404
NCBI-ProteinID:
XP_005045975
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Position
4A:complement(8070660..8071943)
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AA seq
427 aa
AA seq
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MFFLVIFIFTCAAKAGLSLNVSNSCPSMCKCTPEETILCQRAGLKTLPGEIAASTISLNL
SNNYLRTLNTNTFRNLTFLHSLWLDGNNLTFLTPGTFHALSRLQELHLSRNSRLTYLHAN
TFRGLLNLISLDLSHCNIFEIHPLLFSHLPSLERLDLASNNMRYVPQAFRNLSSLTRLSL
EGNHIEAIGRDSLKDLGTLYDLNLRKNRIWIIQNGAFTKLLRLGTLNLGHNFITDLPNQL
FEGLIQLKTMHLEANRIAAVHCTFRQLPNLRNLYLNNNQISSISDSAFLHLNKLHFLHLS
RNNLSSLPVHLFSSLAKLQRVLLWHNPWSCDCSTLWLWRWASPRAAIEGLGCAFLHGPSS
TAPGEPQPAPLGHCTVPLELHSEDKCRVADTSVAPRPPALPGQLVLLALACHTWYHDRGW
GTVVGTF
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgttctttctcgttatatttatatttacttgtgcagcaaaggctgggctgagtctgaat
gtctccaattcatgcccaagcatgtgcaaatgtacacctgaagagaccatactctgccag
agagctggactgaaaaccctgcctggagaaatagcagcatccaccatctctctaaacctc
tccaacaattatttgcggactctcaacaccaacaccttcagaaatctgactttccttcac
agcctctggctagatgggaacaatctgactttcctgaccccaggaactttccacgctctc
agcaggctgcaagagctgcacctcagcaggaactcacgcctcacctacctgcacgcaaac
accttcagaggactattaaacctcatcagcctggatttgtcccactgcaatatcttcgaa
atccacccacttctattttcacacttgccttctttagaaaggcttgatttagcctccaat
aacatgaggtatgtgccacaagcctttaggaacctctccagcctcacgaggctgtccctg
gagggcaatcacatagaagccatcggcagagattccctgaaggacctgggaaccctgtac
gatctgaatctcaggaagaaccggatatggatcattcaaaatggagctttcacaaagctt
ctcaggttgggcacgttaaatttaggacacaacttcatcactgatttgcctaatcagctt
tttgaaggattgatccagctcaagaccatgcacctcgaagccaacagaatcgctgctgtc
cactgcaccttcagacagctgcccaacttgagaaacttgtacttgaacaacaaccagatc
tcctcgatctcagactctgctttcttacacctaaacaagctgcacttcctccacctgagc
agaaacaacctcagctccctgcccgtgcacttgttcagcagcctggccaagctgcagcgc
gtgctgctgtggcacaacccctggagctgcgactgcagcacgctctggctctggcgctgg
gcctcgcccagggcggccatcgaggggctgggctgcgccttcctgcatggccccagctcc
acagcacctggggagccccagcctgcccccctggggcactgcacggtgcccctggagctg
cacagcgaggacaagtgcagggtggctgacaccagcgtggcccccaggccccccgctctg
cccggccagctcgtcctgctggcacttgcctgccacacctggtaccatgacaggggatgg
ggcaccgtggtgggcaccttttaa
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