Ficedula albicollis (collared flycatcher): 101817432
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Entry
101817432 CDS
T02815
Symbol
SYF2
Name
(RefSeq) SYF2 pre-mRNA splicing factor
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101817432 (SYF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101817432 (SYF2)
Spliceosome [BR:
fab03041
]
Complex B
Other components
Prp19-related factors
101817432 (SYF2)
Complex C
101817432 (SYF2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
Motif
Other DBs
NCBI-GeneID:
101817432
NCBI-ProteinID:
XP_005058492
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All DBs
Position
23:6831875..6847248
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AA seq
348 aa
AA seq
DB search
MASGLRAPSGPGGVRGARGERDPLGRSLRGFEQRGGGASLPPECWKPAKPERYSPKSASA
SVICVRCRNSAGFRLLREKMRPGGSCRELPRSERRSSLRGGPGLIGFGGLSHWSQSQHPK
EEAEPGPAAAAEQRREERLRRFRELHMKRYEACKLNSQEVLEEDKRLKLPPNWEAKKARL
EWELQVQEKKKECAARGEDYERVKLLEISAEDAERWERKKKKKNPDLGFSDYAAAQLRQY
QRLTRQIKPDLEQYEKLKEQYGEALYPTSDSLLHGTHVPSKDGVDRMVADLEKQIEKREK
YSRRRPYNDDADIDYINERNAKFNQKAERFYGKYTAEIKQNLERGTAV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgggctgcgagccccgagcggccccgggggggtccggggggcgcggggggag
cgggacccgctcgggaggagcctccggggctttgaacagcgcggggggggagcttccctg
ccccccgagtgctggaaaccagcaaagcccgagcgatattccccaaaatccgcctctgcc
tcggtgatttgtgtccgctgccgaaactccgccgggttccggcttttaagggagaagatg
aggccgggcgggagctgccgggagctgccacgctcggagagacggagcagcctgcgggga
gggccggggttgatcggctttgggggcttatcccactggtcccagtcccaacatcccaag
gaggaagcagagcccgggccggcggcggcggcggagcagcggcgggaggagcggctgcgg
cggttccgggagctgcacatgaagcggtacgaggcctgcaagctgaacagccaggaggtg
ctggaggaggacaaaaggctgaaattgcccccaaactgggaagccaaaaaagctcggctg
gagtgggagctgcaggtgcaggagaagaagaaggaatgtgcagccaggggtgaggactac
gagagggtgaagctgctggagatcagtgctgaggatgctgagaggtgggagaggaagaag
aagaagaaaaatcctgacctggggttctcagactacgcggcggcgcagctgcgccagtac
cagcggctgacccggcagatcaagcccgacctggagcagtatgagaagctcaaggagcag
tatggggaagctctgtaccccacctcagacagcctcctgcacggcacccacgtgccctcc
aaggacggcgtggacaggatggtggcagacctggagaaacagatcgagaagagggagaag
tacagccgcaggcggccctacaacgacgatgccgacatcgactacatcaacgagaggaac
gccaagttcaaccagaaagctgagaggttctacgggaaatacacggcagagatcaaacag
aacctggagaggggcacggccgtgtga
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