Ficedula albicollis (collared flycatcher): 101817482
Help
Entry
101817482 CDS
T02815
Symbol
SMURF1
Name
(RefSeq) SMAD specific E3 ubiquitin protein ligase 1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04120
Ubiquitin mediated proteolysis
fab04137
Mitophagy - animal
fab04144
Endocytosis
fab04340
Hedgehog signaling pathway
fab04350
TGF-beta signaling pathway
fab04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101817482 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101817482 (SMURF1)
04350 TGF-beta signaling pathway
101817482 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101817482 (SMURF1)
04137 Mitophagy - animal
101817482 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
101817482 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101817482 (SMURF1)
04121 Ubiquitin system [BR:
fab04121
]
101817482 (SMURF1)
03029 Mitochondrial biogenesis [BR:
fab03029
]
101817482 (SMURF1)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101817482 (SMURF1)
Membrane trafficking [BR:
fab04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
101817482 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
101817482 (SMURF1)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
HECT type E3
101817482 (SMURF1)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101817482 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
101817482
NCBI-ProteinID:
XP_005054698
LinkDB
All DBs
Position
14:10783293..10803453
Genome browser
AA seq
778 aa
AA seq
DB search
MSSGRAFQCQGMNAGPGVGGVSGAFGWFVSQIANLIGTTMLRSLVKATQDACQDEISSIQ
LIGLFGKLLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVG
KTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRG
QIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPAPYTDTTGAAAG
GGCRFLESPSQEQRLQAQRLRTPEVRAHVQTPQNRPHGHQSPELPEGYEQRTTVQGQVYF
LHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPR
LHHIMNHQCQLKEPSQQPLPAPNEGSLEEGEELPAQRYERDLVQKLKVLRHELSLQQPQA
GHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEML
NPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYK
QLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRN
IPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLD
KIDLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQ
GAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaggcagagccttccagtgtcagggcatgaatgcagggcctggagtcggaggg
gtctcgggggcttttggttggtttgtgtctcagattgcaaatctcattggcaccacaatg
ctgagatcgttagtgaaggccactcaggatgcatgtcaggatgaaattagttccatacag
ctaattggcttatttggcaaattattatgtgccaagaatctcgcaaagaaagatttcttc
agacttcctgacccatttgctaaaatagttgtggatgggtcaggtcagtgccattccact
gacactgtgaagaacacgttggaccccaaatggaaccagcattacgatctatacgttggg
aaaacagattccataaccatcagtgtatggaaccataaaaaaatccataagaaacaggga
gctggcttcctggggtgtgtccgactcctctccaatgccatcagcaggctaaaagatact
ggataccagcgtttggatctatgcaaactcaaccccacagacaccgatgctgtccgaggc
caaatagtggtcagtttacagacacgggacagaataggcacaggaggttctgtagtagac
tgcagagggcttttggagaatgaaggaacggtgtatgaagattcggggccggggcggccg
ctgagctgcttcatggaggagccggcgccgtacacggacacgacgggcgcggcagcagga
ggcggctgccgcttcctggagtcccccagccaggagcagcggctgcaggcccagcggctc
cgcacccccgaggtcagagctcacgtgcagacacctcagaacaggccccacggccaccag
tcaccggagctacctgaaggctacgagcaaagaacaacggtacagggacaggtttatttt
ttgcacacacagactggagtgagcacgtggcatgacccaaggataccaagagaccttaac
agtgtgaattgtgatgaactgggacctttgcctccaggttgggaagtcagaagtacagtt
tcaggaagaatatattttgtagatcataacaacagaaccacacaattcacagatccacga
ctacatcacatcatgaaccaccaatgccagctaaaagagcccagccagcagcctctacca
gctccaaatgagggatcattggaagagggtgaggagttgcctgcacagagatatgaaaga
gacttggtacaaaagttgaaagttcttagacatgagctctctcttcagcaacctcaggct
ggccactgtcgaattgaagtatccagagaggaaatatttgaggaatcctatcgtcagata
atgaagatgaggccaaaggacttgaaaaagaggcttatggtgaaattccgaggagaggaa
ggcctggattatggaggagtagcaagggagtggttgtatttactatgccatgaaatgttg
aatccctactatggactcttccagtactccacagataatatttacatgctgcaaatcaat
ccagactcttctatcaatcctgaccatttgtcttatttccattttgttggtcggatcatg
ggtttggctgtgttccatggacactatatcaacggggggttcacagttcccttttacaag
cagctgctggggaagcccatccagctctccgatctggaatctgttgacccagaattacac
aaaagtttagtctggatcttagagaatgatatcacaccagtcctggaccatacattctgt
gtggaacacaatgccttcgggaggattttacagcatgaactcaaaccaaatggcaggaat
attccagtgacagaagagaacaagaaggaatatgtcaggttgtacgtgaactggcggttc
atgagaggaatagaggcacagttcctggctctgcagaaaggttttaatgaacttattcct
caacatctccttaagccttttgaccagaaggaacttgagctgatcataggaggcctggat
aagatagacctgaatgactggaaatccaacacccgcctaaagcactgcatggctgacagc
aacattgtcaagtggttctggcaagcagtggaaacgtttgatgaagagaggagggcaagg
ctgctgcagttcgtgacgggctcgacgcgtgtcccgcttcaaggtttcaaggctttacaa
ggcgctgcaggacccagactgtttaccatccatttaatagatgcaaacacagacaacctt
ccaaaagcccacacttgctttaaccggatcgacattccgccttatgagtcatacgagaag
ctttatgagaagctgttgacagctgtggaagagacatgtgggtttgctgtggaatga
DBGET
integrated database retrieval system
