Ficedula albicollis (collared flycatcher): 101817757
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Entry
101817757 CDS
T02815
Symbol
CHD5
Name
(RefSeq) chromodomain helicase DNA binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101817757 (CHD5)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101817757 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
101817757
NCBI-ProteinID:
XP_016158939
LinkDB
All DBs
Position
21:3874979..3900613
Genome browser
AA seq
1883 aa
AA seq
DB search
MSENEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDNEDGGLKEPKSS
AQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWRE
FSANNPFKGSSAAAAAAAVAAAVETVTIAPALPASPQLPALPPVIRKAKTKEGKGPGVRK
KIKGSKDGKKKGKGKKVAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRSE
CSAGLGKRGKKRKKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPEL
EKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEDDHMEFCRVCKDGGELLCCDTCP
SSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPPAPLQPVLPSPDPE
LPLPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMFRNYQRKNDMDEPPAF
DYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKW
KDLPYDQCTWEIDDIDIPYYENLKVLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKP
PETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQ
TIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENE
FSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKN
NQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKE
DQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSK
GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGNSLVKSSGKLMLLQKMLK
KLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF
CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV
EERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQR
IAMPDAVTPFSDTLSTKGGAATAGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRN
QDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYE
QQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEG
QSGRRQSRRQLKTDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNS
HWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSL
VRKKVQEFEHVNGKYSTPDLLLEGPESKRSSEVVSSDPNTPVPASPAHTHAGPGALADKI
EAQLGFHEEKDLVEQKPRKVSDSQVPAGAEVESEEHPESCDSKERPREEKQEDCEKAEPS
SEPLVKDEGIQEQEKPLEKAELSSSPGKGEDKEVKPAEDGKEEEKEPSDAQQNGDKEEEE
EGKKDDRNMNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDIWHRRHDYWLLAGIVT
HGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAA
YLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD
MKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQGSFGSAQIFNNSFGPNF
RGPGPGGIVNYSQMPLGPYVTDI
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatgaagaggagatcgaggagaaatcagaaagtgaagggagtgactattct
cccaataaaaagaagaagaaaaaactgaaagataagaaggagaaaaagccaaaaaggaag
aagaaggatgaagaagaagatgacaatgaggatggaggtttaaaggagcccaagagctca
gcccagctcatggaggaatggggtctcgatgatgtagattatgttttctcagaagaggat
tatcacactctgacgaattacaaggctttcagccagttcctcaggcctctgattgccaag
aagaaccccaagatccccatgtccaagatgatgacagtgctcggtgccaagtggcgagag
ttcagtgccaacaaccccttcaagggcagctcggcggcggcggctgcggcggctgtggct
gcagctgtggagactgtcaccatcgccccggcgctccccgccagcccccagctccctgcc
ctgccccccgtcatcaggaaagccaaaaccaaggaggggaagggtccaggtgtacggaag
aaaatcaagggctccaaagatgggaagaaaaaggggaaagggaaaaaggtggcaggcttg
aaattccggtttggaggaatccccagcaaaaggaaaaagggctcctctagtgaagaggag
gaacgggaggaatctgactttgacagtgcgagcatcaacagctcctctgtgcgctccgag
tgctcagctggcctggggaagagagggaagaagaggaaaaagaaaaagaggatcgaagag
ggggacgggtacgagacggatcaccaggactactgcgaggtgtgccagcagggcggggag
atcatcctgtgcgacacctgcccccgcgcctaccacctggtgtgcctggaccccgagctg
gagaaggcccctgagggcaagtggagctgcccccactgtgagaaggagggcatccagtgg
gagccgaaggaggaggaggaggaggaagaggatggcggtgaggaggaggaggatgaccac
atggagttctgccgggtctgtaaggacggaggggagctgctgtgctgcgacacctgcccg
tcctcctaccaccttcactgcctgaacccgccgctgccagagattccaaacggtgaatgg
ctctgcccacgctgtacatgccccccgttgaagggcaaggtgcagcgcatcctgcactgg
gcctggaaggagcccccgcccgccccgctccagcccgtgctgcccagcccagaccccgag
ctgcctctgcccccacccaaggtgctggaggggatcccagagcgcgaattctttgtgaag
tgggcaggcctctcctactggcactgctcctgggtcaaggagctgcagctggagctctac
cacaccgtcatgttccgcaactaccagcgcaagaacgacatggacgagccgccagccttc
gactacggctctggggacgaggacagccagagggagaagcggaagaacaaggacccccag
tatgccaagatggaggagcggttctaccgctatggcatcaagcctgagtggatgatgatc
caccgcatcctcaaccacagctttgataaaaagggagacatccactacctgatcaagtgg
aaggacctgccctatgaccagtgcacctgggagattgatgacatagacatcccctactat
gagaacctcaaagtcctctactggaaccacagggagctgatgctgggggaggacacacgc
cctctgaagaagctgaacaagaaagggaaaaagctgaaagaggagaagctggaaaagcct
ccagaaacacctcttgtggatcctacagtgaagtttgacaagcagccgtggtacattgat
gccacggggggcacgctgcacccttaccagctggaagggctgaactggctgaggttctcc
tgggcacaagggacagatacaatcctggctgatgagatggggctagggaagacggtgcag
accattgtgttcttgtattccctgtacaaggagggccactcgaaggggccgtacctggtc
agtgcccccctctccaccatcatcaactgggagcgtgagtttgagatgtgggcacctgac
ttctacgtcgtgacctacacgggggacaaggagagccgctcggtcatccgggaaaatgag
ttttcctttgaggacaacgccatccggagcgggaagaaggttttccggatgaagaaggaa
gcccagatcaagttccatgtcctgctcacgtcctatgagctgatcaccattgaccaggca
gtgctaggctccatagagtgggcttgtctggtggtggatgaagcacacaggctgaaaaac
aaccagtccaaattctttagagtactgaatagctacaagatcgattacaagctgcttctc
acagggactccgctccagaacaacttggaagagctcttccacctgctcaatttcctgact
ccagagaggtttaacaacctggaggggttcctggaggagtttgcagacatctccaaggag
gaccagatcaaaaagctgcatgacctgctgggtccccacatgctgcggcggctcaaggct
gatgtgttcaagaacatgccggccaagacagagctgatcgtgcgggtggagctgagccag
atgcagaagaagtactacaaattcattctgacgaggaactttgaagcactgaattcgaaa
ggtggtgggaatcaggtctcactgctcaacatcatgatggacctgaagaagtgctgcaat
cacccctacctgttccctgtggcagctgtggaggcccctatgctgcccaatggatcttat
gatgggaattctttggtcaaatcttctgggaaactgatgctgctccaaaagatgctgaag
aaattgcgggatgggggtcacagagttctgatcttctcacagatgacaaaaatgctggat
ttgctggaggatttcctggagtacgaaggctacaagtatgagcggatcgacgggggcatc
actggcggcctgcgccaggaggccatcgacaggttcaatgctcctggggctcagcagttc
tgcttcctcctctccacccgcgccggtggtctgggcataaaccttgctacggccgacact
gtcattatttatgattctgactggaatccccacaatgacatccaggcgttcagcagagct
caccgcatcgggcagaacaagaaggtgatgatttaccgcttcgtgaccagggcctctgtg
gaggagcgcatcacccaggtggccaaaaggaagatgatgctcacccacctggtggtccgc
ccggggctcggctccaagtcgggctccatgaccaagcaagagctagatgacatcctcaag
tttgggacagaggagctcttcaaggatgatgtggagggcatggtgtctcagggacagcgg
attgccatgccagacgctgttacccctttctctgacacactgtcaacaaaagggggtgca
gcaactgctggcatgaaaaaaaagcatggtggcaccccaccaggtgacaataaggatgta
gatgacagcagtgtgatccactatgatgatgctgccatctcgaagcttttggaccggaac
caggatgcaactgacgacacagagctgcagaacatgaacgagtatctcagctcctttaaa
gtggctcagtatgttgtgagagaagaggacggtgtggaggaggtggaacgggagatcatt
aagcaagaggagaacgtggaccctgactactgggagaagctgctgcggcaccactatgag
cagcagcaggaagatctggccaggaacctggggaaagggaagagaatccgcaagcaggtc
aactacaatgacacctctcaggaggaccaagagtggcaggacgagctctctgacaaccag
tcagagtattccattggctctgaggatgaggatgaagactttgaagagaggccagagggc
cagagtggcagaagacagtcccggagacagctgaagactgacagagacaaacctctccct
cctttgctggcaagagttggggggaacatcgaggttctgggcttcaacgcccggcagcgc
aaggcgttcctgaatgccatcatgcgctggggaatgccgccccaggatgccttcaactcc
cactggctggtccgggatctgcgagggaagagcgagaaggagttcagggcgtacgtgtct
ctgttcatgagacacttgtgtgagcccggggcggacggtgccgagacctttgcggacggc
gttcctcgggaggggctgtcacgccagcacgtgctgacgcgcatcggggtcatgtcacta
gtaaggaagaaggtccaggagtttgagcatgtcaatgggaagtacagcaccccagacctg
cttcttgagggcccagagagcaagagatccagtgaggttgtgtcttcggatcccaacaca
cctgttccagccagtccagcgcacacacacgcgggaccaggggcccttgcagacaaaata
gaagcgcaactggggttccatgaggaaaaggacctggtggagcagaagcccagaaaggtg
tctgacagccaggtgcctgcaggtgctgaagtggagagtgaagagcacccagaaagctgt
gacagcaaagagaggccaagggaagagaagcaagaggattgtgagaaggctgagccttct
tctgagcccctggtgaaagatgagggaattcaagagcaagagaagcctttggagaaggcg
gagttgagcagcagccctgggaagggggaggataaagaagtcaaaccagcagaggatggc
aaggaggaagagaaagagccaagtgatgcccagcaaaacggtgacaaagaggaagaggag
gaaggaaagaaggatgacaggaacatgaacttcagattcatgttcaacattgctgatggt
ggcttcacagagctgcacacgctgtggcagaacgaggagagggctgccatgtcctctggc
aagatttacgacatctggcaccgccgacatgactactggctgttggcaggaattgtcact
catggctatgcccgctggcaggacatccagaatgacccacgctacgtgatcctgaatgag
cccttcaagtcagagatacacaaggggaactacctcgagatgaagaacaagttccttgcc
cggcggtttaagttgctggagcaggccctggtgatcgaggagcagctgcggagggcagcg
tacctgaacatgacccaagaccccagtcacccggccatggctctgaacgcgcggctggca
gaggtggagtgccttgctgagagccaccagcacctctccaaagagtctctggctggaaac
aagcctgccaacgctgtcctgcacaaggtgctgaaccagctcgaggagctgctgagtgac
atgaaggctgatgtgacacgcctgccctccatgctgtcccgcatcccgcccgtggctgcc
cggctgcagatgtcagagcggagcatcctcagccgcctggccacccgtggaggggaccca
gctgcccagggctcctttggctctgcccaaatcttcaacaacagctttgggccaaatttc
cgtggtcctgggccaggtggaattgtcaactacagccagatgcctctgggaccctacgtg
actgatatttag
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