Ficedula albicollis (collared flycatcher): 101817792
Help
Entry
101817792 CDS
T02815
Symbol
POLR1B
Name
(RefSeq) RNA polymerase I subunit B
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101817792 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101817792 (POLR1B)
Enzymes [BR:
fab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101817792 (POLR1B)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101817792 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
101817792
NCBI-ProteinID:
XP_016152618
LinkDB
All DBs
Position
3:complement(7529298..7545387)
Genome browser
AA seq
1010 aa
AA seq
DB search
MPQGTIKHTLGHIPVMVKSKLCNLYGFSPQDLLQHHEEEEEMGGYFIINGLEKVIRMLIM
PRRNFPLAMTRHKWKNRGPGFTEYGVVMHCVKDEHTAINMNLHYLENGCVMVNFIFHKEL
FFLPLGFALKALVNFPDYQIFEELVKGREDDTFFGNCVTEMLRAVVDAGCLTQQNVLDYL
GKSFRVKLNLPEWYSNEQAADFILSNCICIHLTKRTEKFYLLCMMTQKLYAFAKGECMED
NPDSLMNHEVLTPGQLFLMFLKERLETWLQSVKFVLQKRAEKADISLNIDSLAKIFSLAP
DFSKPFEYLLATGNLRSKTGLGMLQASGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTT
TVRKLLPESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVMDIPPLLCSLGVTPIDA
APSQPYSECYRVVLDGSMVGWVERELAPEIAQTLRRFKITQEKRFPARAEVVLIPMTGKP
SLYPGLFIFTSPCRMVRPVKNLSYGRNEWIGTLEQIFMNVATMESEVVPGVTTHQELFPH
SILSVVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYRDRSDNKLYHLHTPQSPLVRP
SMYDYYGMDSYPVGTNAIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKVESIDLSLK
ASRAGDNLVFGIKPGDPNVGEKLDADGLPFVGSILQPGDPFYSFMNFDTGETFTVYYPSK
EVGVVDNVRLCSNDRGTGKFKKACITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPF
TENGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGE
TLASAGYNFFGTEKMYSGISGVELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQ
PVKGRNVEGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMTSPVLEKL
SHSSVTSSRRYSCSVCSKVDAIEVVPVPHVFHYFVAELAAMNIKTKLNVE
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaggaactatcaaacacaccttagggcacattccagtcatggtgaagtccaaa
ctgtgcaacctctatggtttttctccacaagaccttctgcagcaccatgaggaggaagag
gaaatgggaggctactttataatcaatggcttagaaaaagtaatcaggatgttgattatg
cctaggcgaaacttccctcttgcaatgacaagacacaagtggaaaaacagaggccctggt
ttcacagagtatggggttgtgatgcattgtgtcaaggatgagcatactgcaataaacatg
aaccttcactacttggaaaacggctgtgtcatggtgaatttcatttttcacaaagagttg
ttcttcctccccttgggatttgctctgaaggcattagttaatttcccagactaccagatt
tttgaagagctggtgaaaggaagggaagatgacaccttttttgggaactgtgttactgag
atgctgagagcggtggtggatgctggctgtttgacacagcaaaacgtcctggattacctg
ggaaagagcttcagagtgaaactcaacctgcctgagtggtacagcaatgaacaggctgca
gatttcattctgagcaattgtatttgcattcacctgaccaagagaactgaaaagttctac
ctgctctgtatgatgacccagaagctctatgcttttgctaaaggggaatgcatggaggat
aatccagacagtctcatgaatcatgaagtgcttaccccaggacagcttttccttatgttc
ttaaaggagaggcttgaaacctggctgcaatctgttaagtttgttctgcagaaaagagca
gaaaaggcagatatcagcctgaatatagatagcctggcaaagatattcagcctggcacca
gacttcagcaagccatttgagtatctgcttgcaactggtaatctgcggtctaaaacaggg
ctgggcatgttgcaggccagtggtctctgtgtggtgggggacaagctgaatttcatccgc
tacctgtcccacttccgctgcatacacagaggggcggcgttttcccagatgagaaccacg
actgtccgcaagctgctgcccgaatcctggggcttcctgtgccctgtggacacccctgat
ggagagccctgtgggctgatgaaccacatgacagctctgtgtgaaatcgtcaccgagatg
gtgcccgtgatggacattccacctttgttatgttccctgggtgtcacccccattgatgca
gctccaagccagccttactcagagtgctacagagttgtgctggatggctccatggtgggc
tgggtagagcgggagttggctcccgagattgcacaaaccctccgccgtttcaagataaca
caagagaagagatttcctgcacgggcagaagtggtccttatcccaatgacaggaaaaccc
agcctgtatcctgggctgttcattttcactagcccttgccggatggtgcggcctgtcaag
aacctgtcctatggaaggaatgaatggattgggactctggaacagatcttcatgaatgtg
gccacgatggagtcagaggtggtgcctggagtgaccactcaccaggaactcttccctcac
agcattttgagcgtggtggccaatctcattcccttctctgaccacaaccaaagtccacgg
aacatgtaccagtgccagatgggaaagcagaccatggggtttcctgtttacaactacagg
gatcgctcggataacaagctgtaccacctgcacaccccccagagccctctggtgaggccc
agcatgtatgattattacgggatggacagctatcctgttggcaccaacgctattgtggct
gtcatctcctacagtggctatgacatggaagatgcaatgatcgtaaataaatcttcctgg
cagagaggatttgcttatggaagtgttatcaaggtggaaagcattgacctttcccttaaa
gccagcagggcaggcgataatttagtatttggcatcaagcccggtgatcccaacgttggg
gagaagctggatgctgatggactgccttttgttgggtctatcctgcaacctggggacccc
ttctacagcttcatgaacttcgacacaggggagaccttcactgtgtactatccgagtaag
gaagtgggcgttgtggacaacgttaggttgtgcagcaacgaccgtggcactgggaagttc
aagaaggcttgcatcactgtgagggttccccgaaatcccactattggagacaaatttgcc
agccgtcatggacagaaaggtatcctgagccagctctggcccgtcgaggacatgccattc
acggagaacgggatggttccagacatcctcttcaaccctcatggctttccttcccgcatg
accattgggatgttgattgagagcatggcggggaagtcagcagccctgcatggggtctcc
tatgatgccactcccttcaccttcaccgagaagaagtctgctctgaaatactttggtgag
actttagcgagcgcgggttacaacttctttgggacggagaagatgtacagcggcatcagt
ggggtggagctagaggcagagatcttcgtgggggtggtgtactaccagcgcctgcgccac
atggtctccgacaagttccaggtgaggaccacggggccccgagacgccgtcaccaaccag
cctgtcaaggggaggaatgtggaaggcgggatccgcttcggcgagatggagcgggacgct
ctgctggcccacggcacgtccttcctgctgcaggaccgcctcttcaactgctctgacggc
tccgtggcctatgtgtgcacgagctgcggcagcatgacatcccctgtgctggagaaactg
tcccactcctctgtcaccagcagcaggaggtattcctgctccgtctgcagcaaggtggat
gccatcgaggttgtccctgtgccccatgtcttccactattttgtggctgagctggcagcc
atgaacataaaaacaaagctcaatgtggagtag
DBGET
integrated database retrieval system
