Ficedula albicollis (collared flycatcher): 101817848
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Entry
101817848 CDS
T02815
Symbol
NUP153
Name
(RefSeq) nucleoporin 153
KO
K14296
nuclear pore complex protein Nup153
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
fab03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101817848 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101817848 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101817848 (NUP153)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101817848 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
zf-RanBP
Nup_retrotrp_bd
Phage_cap_P2
Motif
Other DBs
NCBI-GeneID:
101817848
NCBI-ProteinID:
XP_005041624
UniProt:
U3KG17
LinkDB
All DBs
Position
2:complement(65554213..65601284)
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AA seq
1453 aa
AA seq
DB search
MASGGSGGGKIRTRRHHLGVAKPPYARGKQQLGLLSRVTESVKNIVPGWLQKYFNKREDK
CVDMNESANEEENPVNYHHDYANEDAMVIDGRVTPESARINLEEPCTSRSALNFSDVLTR
PSLHRSHLNCTVLDSTVPHCQPSTSTALGIGSPGLSLVKEIKDSTSQHDDDNISTTSGFS
SRASDKDITVSKNTSAPLLWSPEAERSHSLSQQPASSSKKPAFNLSAFGSPSPSLGNTSV
FKTRQLGDSPFYPGKTSYGGAAAAARQTKMQISPYQPPIKRQMKAKQANVQSYGVTSSTA
RRILQTLEKMSSPLADAKRIPSSVSSPLSSPVDRSVLNVTSFQSRQNQMDSQHPPVQKLV
TPKPISLTGSRITYFKPSLKSATNSRKIHQRVDTDHHDMMEESFPAEKPVKSSESKLSYP
KLDTPASNGLSSGGRMDSSCGKMRRERERYGASRPAQKQQQQQLEMEQEELPEVPLPIST
ASLPTFNFSFPASSAVSSSPSIVSKPVMNKVQPASSVGSPTFVFSSPIVKSTEVKVLPPV
SQIKFTFSVPVVKSSELSGSTDTPVTSILSPGSATVNSTSNKKEEEEEYDGFCKPAKFLK
QGSVLDILKSPGFMSGKSPSCSSAQPVTSTVVYTRPAISSFSAGKDTSKQASSFWQSDTQ
DPCVQNKTTDGKCVTCEAAKVSTVESTKQTISVSPCVSSKTTLPTSGTLGFEDKFKPAPN
MWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTMPVVTDNSVTVTSTSNSTGTTATLG
FGDKFKQPKGSWNCSVCLLQNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSASSGGFLDL
DKFKKPEGNWQCEVCLVQNKAEATQCIACESAKPGTKAELKGFGTTTVSTNAAMPSFTFG
VPSASSEPSQTLGSTGNFKFGEQSSFKFGIASESASSNTVTGEFKFPTGSGNFKFGVSSS
DSKSEDSKKESKSNSFTFGLPSTSSQAPSTFQFGTTSLGQQEKKEEPVLGGFGFATSSTS
SIATNENKTGVGGFTFGTVAEKDAASPALPFKKPDEKKDETVSTKGGFSFGSVESAPASQ
FVLGRTEEKQDSVTSAGPLAFGKKADNEELKAQPIFSSGTAEHTKEESTAKPVFNFSFGK
PLEKESEQAKAPFAFGAPTSTSDQGASFSFLSSSSSSTVVPTTSANSSSVFGSTLTSSNP
QPVPTPFVFGQPSNTVTSSVFGNPAEPTTSQAFGFSQENKPAATSSSTGSTITPFVFRSG
ESSTNAANSGFTFGATTTSSSTGSSSSFLFGSGPAAPAAGPAFGASQPPAFGPSPGSGQQ
SAPSFGSLSTTLFSAGSHPAPSAFGSVTSSTQPSVFGQQAAHQPAFGSGTPGAGSVFQFG
SSTTNFSFTNNPGVFTFGASPSAAAAPAPPSGTAGFSFNQPTFTVGTNGKNVFSASGSSV
PGRKIKTAVRRRK
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggtggcagcggcggcggcaagatccggacccggcggcatcacctgggagtc
gcgaagccgccctacgcgaggggcaagcagcagctggggctccttagcagagtgaccgaa
tcagtgaaaaacattgtaccaggatggctgcagaagtatttcaataaaagggaagataaa
tgtgtagatatgaatgaatctgcaaatgaggaagagaatccagtaaactatcaccatgat
tatgcaaatgaagatgccatggtaattgatgggagagtcacgcctgaatcagcaagaatt
aatttagaagaaccatgcacgagcaggtctgcactgaacttctcggatgtgttaacaagg
ccctcccttcaccggagccatttgaactgcaccgtgttggattccacagtcccacactgt
cagccctccacatctactgcacttggcatcggcagtcctgggctgtcccttgtaaaggaa
ataaaagattctacctctcagcacgatgacgataacatctcaacaaccagtggcttctcc
tctagagcatccgataaagatatcacagtttcaaaaaatacttcagcaccactgctctgg
tccccagaggctgaaagatctcattccctctcacagcaacctgcatctagctccaaaaaa
cctgcattcaatttatctgcttttggatctccctctccttcacttggaaacacttctgtc
tttaagacaagacagcttggggattctccattttaccctggaaagacctcttatggtggt
gcagccgcagcagcaagacagacaaaaatgcagatttctccttaccagccaccgataaaa
agacaaatgaaagctaaacaagcgaatgtgcaatcctatggtgtgactagttccactgcg
cggcgcatcttgcagacactggagaagatgtcaagccccttggcggatgctaagaggatt
ccatcttctgtttctagtccgctgtcttctcctgtggacaggagtgtgctgaatgtgact
agcttccaatccagacaaaaccagatggattcgcaacatccacctgtccagaaacttgtg
acaccaaagccaatctccctgacagggagtcggatcacatattttaaaccatctttgaaa
tcagctactaattccagaaaaattcaccaaagggtagatacagaccatcacgacatgatg
gaggagagttttcctgcagaaaagcctgtaaaatcatctgaaagcaaattgagctacccc
aaactcgatactcctgcatccaatggtctgtcttcaggaggaaggatggatagttcctgt
ggcaagatgagaagggaaagggaacgatacggtgcgtcaagacctgcacaaaaacaacaa
caacaacaactggagatggagcaagaggaactacctgaagtacccctgcccatcagtact
gcctcgctgccgacattcaacttcagtttccctgccagtagtgctgtctcctcatcaccc
agcattgtttcaaaaccagtgatgaacaaggtacaaccagcaagtagtgttggcagtcct
acgtttgtattttcatctccaattgtgaaatctaccgaggtgaaagtgctacctccagtg
tctcagattaagtttacgtttagtgttcctgttgtaaagtcatcagagctttctggatcc
actgatacgccagtgacatccatccttagtccaggtagtgccactgtaaacagcaccagc
aataagaaggaagaggaagaagaatatgatgggttctgcaaacctgctaagttcttaaag
caaggaagtgtgttagacattctaaaaagccctggctttatgtctgggaaatcaccctcc
tgttcatctgcacagcctgttacgagcacagtggtctatacaaggcctgcaataagtagt
ttctctgcaggtaaagacacctctaaacaagcatcctcgttttggcagtctgacacacag
gacccatgtgtgcagaacaaaaccacagatggcaagtgtgtaacatgtgaagctgctaaa
gtgtccactgttgagagtacgaagcagacgatcagtgtgagtccgtgtgtctcctccaag
acaacgctccctacgtcagggacactgggctttgaagataaatttaaaccagcacccaac
atgtgggattgtgatacctgtctggtccagaacaaacctgaagctacaaaatgtatagca
tgtgagacaccaaagcctggaacaggggtgatgcctgctctgacaatgccagtggtcacg
gacaactcggtgacagtgacatccacctccaatagcactggcacaacagccactctgggg
tttggagataaatttaaacagccaaaaggctcttggaactgttcagtgtgccttctacaa
aataaggcagaagacagcaaatgtgtagcttgtcagtctgagaaaccagggagttcagtg
cctgtgaccagtagcagtgtttctgcattttctgcttcttctggaggttttctggattta
gacaaattcaagaagcccgaaggaaattggcaatgtgaggtctgcttggtccaaaacaaa
gcagaagccacacagtgcatagcctgtgaaagtgcaaagccaggcaccaaagcagagctc
aaaggttttggtactactactgtgtctacaaatgctgcaatgccatcatttacgttcggt
gtcccgtcagcatcctctgaaccatctcaaacattaggtagcacaggaaattttaaattt
ggagaacaaagtagctttaagttcggcattgcatccgaatctgcatcgtccaacactgtg
actggagaatttaagtttcctactggttcagggaacttcaaatttggagtttcttcctca
gactctaaatcagaagacagcaaaaaagaaagtaaaagtaacagttttacctttggactt
ccatctacaagtagtcaggctccttcaacatttcagtttggaactacgagtctgggacag
caggaaaagaaagaggaaccagttttaggaggttttggttttgctacaagttctacttct
tccatagctacaaatgagaataaaactggagtcggtggcttcacttttggaaccgtggca
gaaaaggatgcagcatcacctgctttgccattcaagaagccagacgagaagaaggatgaa
actgtttcaacgaagggaggcttctcttttggcagtgtggagtcggcacctgcctcacag
tttgttttgggaaggacagaagagaagcaggactctgtcacttctgctggtccgttagca
tttggaaagaaagctgacaatgaagagttaaaggcacagcctatcttttcatctgggaca
gctgagcataccaaagaggagagcacagcaaaacctgtattcaattttagttttggtaaa
ccgttggaaaaggaaagtgagcaggcaaaggcaccttttgcatttggggcaccaaccagt
acttcggatcaaggagcatccttcagcttcttgagctccagttcctccagcacagtggta
cccaccacttcagccaacagcagcagtgtgtttggcagcactctcacttcctcaaaccct
cagccagttcccactccctttgtgtttggacagcccagcaacactgtgaccagctctgtt
tttggcaatcctgcagaacctacaacatctcaggcatttggcttctctcaagaaaacaaa
ccagcagccacatcttccagcactggctcgactattactccctttgtctttcgttcagga
gagagcagtaccaatgcagcaaattcaggatttacttttggagccacaactacatcaagt
tcaacagggtcatcctcttcgtttctgtttggctcagggcctgcagcgcctgctgccggc
ccagcctttggcgccagccagccaccagcatttggcccgagcccaggctctggccagcaa
agcgctccaagctttggatcgctgtcaacaacgttgttttctgctggctctcaccccgct
ccttctgccttcggctcggtgacaagcagcactcagccctctgtgttcggacagcaggca
gcccatcagccagcttttggctctggtacccccggtgctggttctgtattccagtttggc
agtagtactactaatttcagctttacaaataacccaggagtattcacttttggtgcaagt
ccttctgcagcagcagctcctgcaccaccttctggcactgcgggattttcgttcaaccag
cctacatttacagtggggactaatgggaaaaatgttttctctgcctctggatcttcagtt
cctggtcggaagataaagactgcagttagacgtagaaagtaa
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