KEGG   Ficedula albicollis (collared flycatcher): 101818046
Entry
101818046         CDS       T02815                                 
Symbol
TAF5L
Name
(RefSeq) TATA-box binding protein associated factor 5 like
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
fab  Ficedula albicollis (collared flycatcher)
Pathway
fab03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:fab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101818046 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fab03021]
    101818046 (TAF5L)
   03036 Chromosome and associated proteins [BR:fab03036]
    101818046 (TAF5L)
Transcription machinery [BR:fab03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101818046 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     101818046 (TAF5L)
Chromosome and associated proteins [BR:fab03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     101818046 (TAF5L)
    STAGA complex
     101818046 (TAF5L)
    TFTC complex
     101818046 (TAF5L)
    SAGA complex
     101818046 (TAF5L)
    SLIK complex
     101818046 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd TFIID_NTD2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_WDR41 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Tricorn_2nd Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_HPS5 WD40_RFWD3 PEP5_VPS11_N Beta-prop_WDR19_1st PROPPIN eIF2A Ge1_WD40 WD_LRWD1 Mala_s_1-like Nbas_N
Other DBs
NCBI-GeneID: 101818046
NCBI-ProteinID: XP_005043504
LinkDB
Position
3:42567217..42582208
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRHQYVDSEGPLKQGLRLCQTAEEMAANLTVQSESGCANVVSA
APCLAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNMVQNGLKSTVDSFY
SRFHGMFLQNASQKDIIEQLQTTMTIQDILSNLKLRAFLDNKYVIRLQEDSYNYLLRYLQ
SDNNNALCKVLTLHIHLDVQPAKRTDYQLYAGGSSSRNESNGLEPSDVPASILQNEAALD
LLQDSIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPNSKLLAAGFDNSCVKLWSLRSR
KLKSEPHLVDVSRIRLACDILDEEEEEDDNTGTEMKILRGHCGPVYSTRFLSDSSGLLSC
SEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDISPCSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCIKFHPNSNYIATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCNAPADGSSSELVGVYTGQMNNVLSVQFMACNLLLVTGIAQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgcgtacgcacagaacagattcagatggcagtgtcctgctacctcaagcgccat
cagtatgtggactcagaaggtcccctaaaacaagggctgaggctgtgtcagactgctgaa
gagatggcagctaatctcacagtccaatctgagtctggttgtgccaacgttgtgtctgca
gctccctgcctggcggagccacagcaatatgaagtacagtttggacgattacgcaatttt
ctgacagattcagattctcagcacagccatgaagtgatgcctcttctatatcccctcttt
gtctacctccatctgaacatggtccagaatggcctaaaaagcacagtggacagtttttac
agccgcttccatggcatgttcttgcagaatgccagccagaaagatatcattgaacagttg
cagactaccatgactattcaagatatcctgtccaacttgaaactccgggcttttctggac
aacaaatatgtcatccgccttcaagaggacagctacaactaccttcttcgctacctccaa
agtgacaacaacaacgccctgtgcaaagtcctgaccttgcatattcacctggatgtgcag
cctgccaagaggactgactaccagctctatgccggtgggagctcctcacgcaacgagagc
aacggcctggaacccagcgatgtgccagcttccatcctgcagaatgaggcagcgctggat
ttactgcaggacagcattaaacgtgtcaaggacgggcccccttccttaaccaccatctgt
ttctatgccttctataacacagagcagttgctgaacactgcagagatttcaccaaatagc
aagctgctcgctgctgggttcgataattcgtgtgtgaagctgtggagcctgcgctccagg
aagttgaaatctgagccccaccttgttgatgtgtcccgcatccgtttggcttgtgacatc
ctggatgaggaggaggaagaggatgacaacacaggcacagaaatgaagatcctgagagga
cactgtggacctgtgtatagcacgaggttcctttcagatagttcaggactcttgtcttgt
tctgaggatatgtccatcagatactgggacctgagaagttttacaaacactgtgttgtac
caaggacatgcctatcctgtctgggatttggatattagcccctgcagcctgtactttgcc
agcggctcccacgatcgcacggcaaggctctggtcgtttgatcggacgtacccgctgcga
atatacgcgggccacttggcggacgtggactgcatcaagttccaccccaattccaactac
atagcgacgggctccacggacaaaaccgtgcgcctgtggagcactcagcagggcaactcg
gtgcggctcttcaccgggcaccggggccctgtgctggcgctcgccttttcccccaacggg
aagtacctggcatcggcaggcgaggaccagcggctgaagctgtgggacttggcatcagga
actctttacaaagaactgagggggcacacagacaacataaccagccttactttcagccct
gacagtagtttgattgcttcggcgtcgatggacaattcagttcgggtctgggacattcgg
aacacttactgcaacgcccctgcggacgggtcttccagtgaactggttggtgtatatacc
ggacagatgaacaatgtactgagcgtacagtttatggcctgtaatcttctcctagtgact
ggaattgcacaagaaaatcaggaacattaa

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