Ficedula albicollis (collared flycatcher): 101818098
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Entry
101818098 CDS
T02815
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101818098 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101818098 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fab04812
]
101818098 (VIM)
04147 Exosome [BR:
fab04147
]
101818098 (VIM)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
101818098 (VIM)
Cytoskeleton proteins [BR:
fab04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
101818098 (VIM)
Exosome [BR:
fab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101818098 (VIM)
Exosomal proteins of other cancer cells
101818098 (VIM)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
FKBP15
DUF1664
TolA_bind_tri
KIF21A_4th
ANG-1
DUF7491
DUF4200
Sec10_N
TPR_MLP1_2
RBD-FIP
DUF4515
Motif
Other DBs
NCBI-GeneID:
101818098
NCBI-ProteinID:
XP_005040805
UniProt:
U3JYD1
LinkDB
All DBs
Position
2:complement(21327237..21335444)
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AA seq
459 aa
AA seq
DB search
MSISTKNSSYRRMFGGGSRPSTGTRYITSSSRYSLGSALRPSSARFVSASPGGMYATKTT
SVRLRSSMPPMRLHDSVDFTLADAINTEFKANRTNEKVELQELNDRFANYIDKVRFLEQQ
NKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLADDIMRLRE
KLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIVFLKKLHDEEIRELQA
QLQEQHIQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNND
ALRQAKQEANEYRRQIQSLTCEVDALKGSNESLERQMREMEENFAVEAANYQDTIGRLQD
EIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRINMPIPTFAALNLRETN
IESQPMVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagcacgaaaaactcctcgtaccgccgcatgttcggcgggggcagccgcccc
agcaccggcacccggtacatcacgtccagcagccggtactcgctgggcagcgccctgcgg
cccagcagcgcccggttcgtgtccgcctcgcccggcggcatgtacgccaccaagacgacg
tcggtgcggctgcggagcagcatgccgcccatgcggctccacgactccgtggacttcacc
ctggccgacgccatcaacacggagttcaaggcgaaccgcaccaacgagaaggttgagctg
caggagcttaatgaccgcttcgccaactacatcgacaaggtgcgctttctagagcagcag
aacaagatcctgctggccgagctggagcagctcaagggcaagggcacgtcccgcttgggc
gacctgtacgaggaggagatgcgggagctgcggcgacaggtggaccagctcaccaacgac
aaggcacgcgtggaagtggagcgggacaacctcgccgacgacatcatgcggctgcgggag
aagttgcaagaggagatgcttcagagggaggaggccgagagcaccctgcagtccttcaga
caggatgttgacaatgcctctctggcacgtcttgatcttgagcgcaaagttgagtccctg
caagaggagattgtcttcttgaagaagcttcatgatgaggaaatccgagaattgcaggcc
caactccaggaacagcacatccaaattgatatggatgtttctaagcctgatctcactgct
gccctgcgtgatgttcgccagcagtatgaaagtgttgctgctaagaatcttcaggaagct
gaagagtggtacaagtccaaatttgcagatctctctgaagctgctaacaggaacaacgac
gccctgcgccaggccaagcaggaggccaatgagtaccgcagacagatccagtctctcacc
tgcgaagtcgatgctctcaagggaagcaatgagtccctggagcgccagatgcgtgagatg
gaggagaactttgctgttgaagctgctaactaccaagacactattggccgtctgcaggat
gagattcagaacatgaaggaagaaatggctcgccatctccgcgagtatcaggacctgctg
aatgtaaagatggctcttgatattgagattgccacctacagaaaactgctggagggtgaa
gagagcaggattaacatgcctattccaacctttgctgctttgaacctgagagaaaccaac
attgagtctcagccaatggttgacactcactcaaagagaacacttctaattaagaccgtg
gaaactagagatggacaggttattaatgaaacttcccagcatcacgatgacttggagtaa
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