Ficedula albicollis (collared flycatcher): 101818183
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Entry
101818183 CDS
T02815
Symbol
CCDC88C
Name
(RefSeq) coiled-coil domain containing 88C
KO
K25811
protein Daple
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101818183 (CCDC88C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
GAS
Motif
Other DBs
NCBI-GeneID:
101818183
NCBI-ProteinID:
XP_005047558
LinkDB
All DBs
Position
5:complement(47441601..47532536)
Genome browser
AA seq
1999 aa
AA seq
DB search
MNLPNVLMIGKDPLSGKSMDEIKKLLLLVLGCAVQCERKEEFIDRIKQLDIETQAAIVSH
IQEVTHNQENVFDLQWLELPDMAPEELESLSRNMVFHLRRLIDERDECTEVIVDLTQERD
YLQSQQPPSPLKVPSPDSSPNPANPLSNEEKQHLAVELADTKAKLRRIRQELEEKSEQLA
DSKHEVEQLTLELQKIKQENMHLAADARSARAYRDELDSLREKANRVERLEMELVRCKEK
LHDVEFYKARMEELREDNIVLIETKAMLEEQLTMARARGDKLHELEKENLQLKSKLHDVE
LDRDTDKKRIEELLEENMVLEIAQKQSMNESAHLGWELEQLSKSTDLADTRKSFVFELNE
CASSRILKLEKDNQSLQNTIQELRDASLTSRESSLKFVELEKENQQLSKKIEKLQNQIEK
EKQSNQDLETLSEELIKDKEQLQVVMETLKADKDRQIKDLKQENDHLNQVVLSLRQRSQV
SSEARVKDIEKENRILHETVTETSSKLSKLEFEKKQLQKDFDQVREKVERVEEMEKELHR
LERENEQLTKKAAVMKIVTEKVEVLEQENGDLEVENRKLRKSLDTLQNISIRLSDLERDN
KQLDEENLELRRVVETMRFTSTKMAQIEAENKDLEREKEDLRKNVEMLKAMNKKSERLEL
SYQSINSENQRLQQIVENSSKKIQELEKEVQGMESENQVLQRNLEELKVSAKRIERLEKE
NKALEQGMSQLEKDKKMLEKETKRLWQQLELKDAILDDSTVKLAVAEKENKTLEKEIARF
RDSSSKLKEFEKDNKDLLKQVTIDKRTLATLREDLVLEKLKSQKLSSELDKLSQELEKMG
LSKELLLEDDNGNDDIKYKVLESKTESVLKSTLAVKEEKITMLEAQVKDFLNLNQQLQND
LNMVKKDFDALKQTQQNGQYAQKSLRNSAEKLIPNQQMNENLEMRHQEATTELLKLKDRT
IELERNNAALHTEKQLLKEQLQHLETQNVSFNNQILTLQKQNVFLQEHNTSLQTQTAKLQ
VENSTLSSQSASLTAQNALLQNQQTAKENENENLLKQKEQLKAEYESLLQDHEHLASLHE
RQSAEYERLINQHSCLKTLHKTLDLEHKGLRERYNSLTKHKAELEELELVLKTEREVLQQ
ERRSNAITTGENQKLREELERVNFLHNQLKAEYEGLHSHTKELKTSLNNSQLELNRWQAR
YDELKEQHQSMDISLTKLDNHCELLSRLKGNLEEENHHLLSQIQMLSQQNQMLLEQNMES
KEQYHEEQKQYIDKLNALRRHKEKLEEKIMDQYKFYDPAPKKKNPWIGARALVKLIKPKK
ETPRERLKPAAESSMWYSESPEMINSPSASQKLKHQHEAQDNTSQGSNPGEERENPGGSS
NKVLMDLKQKRNSHHGGSNDNGEISADSATKPSCVEMDARTYSTSAIHVHTSTPISRLQS
RPKGYNSEDNLCEQSPEVEFANTRRHVSRPNSLESSRNASSSSSPLNLKGSLDHIHGRTE
SLNSEDLVPSREAPVLLRDTYSLHSAAAFLSPGSRHELSSHRNDLMSCDVPQKSNPSQSH
SGRQRSASPGSEMVTLEEFLEESNRLSLQSHRRSLNESEMISLHQFLLEADSLYPSCYFP
CPCIHQEHSQSLESVLSVSYPDSVRHRTGRGNRRSASFYIPRGPSTNRDDLLSDYFRKAN
EPSATGNLLVQPSRKEAGKMPTSLVAPTVKMAVAGEEGRTAKPDNYMKPNLRQVEPDALA
NPQGSLKLPHTPQHQSASGVRQMAQPQQPGTVSRRSTSLNRAFSLASADLLRAAGPEAYR
QESPQKSGAELHGGRDTVCQSTRASVPTNSQAPLRERPQSAKAASSVQGVDSRCRQLDVR
RLSLVPPKDERPLSFHQFSASPTASTSSLNVQQQERVNPGQHYSSASHTPSKVKPRSAPR
TEDVATVAPARAVCSSTEGITSPGQGQGDALLTKCQGKLLESSSGAVEETVRAGSSNSTP
GSPDPQGDQQTVWYEYGCV
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaccaaatgttttaatgattggcaaagatcctctttctggtaaaagtatggat
gaaatcaagaagctgctgttgttggttctgggatgtgctgtgcagtgtgaaaggaaagaa
gagtttattgacagaataaaacagctggatattgaaacccaagctgccattgtgtcacac
attcaagaggtgactcacaatcaggagaatgtctttgacttgcagtggctggaactccca
gatatggccccagaagaactagagtctctatccaggaatatggttttccacctcaggagg
ctcattgatgagagagatgaatgcacagaagtcattgtagatctcactcaagagagagat
tatctgcagtctcagcagccaccaagccctctgaaagtaccaagtccagattcttcacca
aaccctgccaaccctctttctaatgaagaaaagcagcaccttgcagttgagctggcagac
acaaaggctaaattgagaagaatccgtcaggagctggaagagaagtctgagcagcttgca
gattctaaacatgaagttgagcagctcaccctagagctgcaaaaaataaagcaagagaac
atgcaccttgccgcagatgctcgctctgcccgagcgtacagagacgagctcgattccctg
agagagaaggcaaaccgcgtggagagactggagatggagctggttcggtgcaaagagaag
cttcacgatgtggagttttacaaagctcgcatggaggaattaagagaggacaacattgta
ttaattgaaacaaaggccatgctggaagaacagctaactatggcaagagctcgtggtgat
aagctgcatgaattagagaaggaaaatttgcagttgaaatccaaacttcatgatgtagag
ctggaccgggacacagacaagaagagaattgaagagctgctggaggagaacatggtcttg
gagattgcacagaaacagagcatgaatgagtctgcacacctaggctgggaactagagcaa
ctgtctaaaagcactgatcttgcagataccagaaagtcctttgtgtttgagttgaatgaa
tgtgcttcaagtcgaatactgaagctggagaaggataatcagagcttgcagaacacaatc
caagagctgagagatgcctccttgacctccagagagagcagcctaaagtttgtggaactg
gaaaaggaaaatcagcagcttagcaaaaagattgagaagttgcaaaatcaaattgaaaaa
gagaagcaaagcaatcaagatttggagaccttgagtgaggagctgataaaagataaagag
cagctacaagttgtcatggagactctaaaagctgacaaagacagacagataaaggacctt
aaacaagaaaatgatcatcttaatcaagttgtcttatccctgagacaaagatcacaagtg
agcagtgaggcaagagtgaaagatattgaaaaagagaacagaatccttcatgaaacggta
actgagacgagtagcaaactgagcaagctggaatttgagaagaaacaattgcaaaaggat
tttgaccaggttagagaaaaagtggaaagagtggaagaaatggaaaaagagctccaccgg
ctggagagggagaatgaacagctcacaaaaaaggcagcagtgatgaaaatagtgacagaa
aaagttgaagttctggagcaggagaatggtgatctggaagtggaaaataggaaactaaga
aaatcattggacacattacaaaatatatccattcggcttagtgaccttgaaagggacaac
aagcaattggatgaagaaaatctggagctcagaagagtggtagagaccatgagatttacc
agcacaaaaatggcacaaatagaagcagaaaataaagatttggagagagagaaagaggac
ttaagaaagaatgtggaaatgttaaaagcaatgaacaagaaatcagagaggctcgagcta
agctatcagagtatcaattctgaaaaccagagacttcagcaaattgtggagaatagcagt
aaaaagatccaggaattagaaaaagaagttcaaggaatggagagtgaaaatcaggtcctc
cagaggaatcttgaagagctgaaggtttctgccaaacgaatagagaggttagaaaaggaa
aacaaagccctagaacaaggaatgtctcagctagagaaagacaaaaaaatgctagagaaa
gaaacaaaacggctttggcagcaattggagctgaaagatgctattttggatgacagtaca
gtaaagttggcagtggctgagaaggaaaacaagacactagaaaaagaaattgctcgattc
agagattcttctagtaaactgaaagaatttgaaaaggacaataaagacctcctaaagcaa
gttacaattgataagaggacactagctacactgagagaggatttggtcctggagaagctg
aagagtcagaagctatctagtgagctggacaaactgagccaggaactggagaagatggga
ttgagcaaagagctgctgctggaggatgataatggcaatgatgacataaaatacaaggtt
ctggaaagcaaaactgaatcagtactgaaatcaactctagctgtgaaagaggaaaagatt
acaatgctagaagctcaagtgaaagactttctgaacttgaaccagcaattacagaatgat
ctaaatatggtgaagaaggactttgatgcacttaagcagactcagcagaatgggcagtat
gctcagaagtcactgaggaattcagcagagaagctcattcccaaccagcaaatgaatgag
aatttggaaatgaggcaccaagaggctactacagagctgctgaaactgaaggacaggacc
attgaactggaaaggaataatgcagccctgcatactgagaagcagctgcttaaggagcag
ctacagcatttggaaacacagaatgtctccttcaacaatcagatcctgacactacagaaa
caaaatgtcttccttcaggaacataacacttccctgcagacgcagacagccaaactccag
gtagaaaattcaactctcagctcccagagtgcttcattgacagcccagaatgctttgctc
caaaatcagcagacagccaaggagaatgagaatgaaaatctactgaaacagaaggagcag
ctgaaagctgaatatgagtcattgcttcaggaccacgaacaccttgcttcactgcatgaa
cggcagtctgcagagtatgaaaggctaataaatcagcacagctgcctgaaaacattgcac
aaaaccctggatctggagcacaaaggtctgcgggagagatacaacagtttaacgaagcac
aaagcagaattggaagagttggaattggttttaaaaacagagagagaagttttgcaacaa
gagagaagatcaaatgcaataaccactggggaaaatcagaagctgagagaggaactggag
agggtgaatttcttgcacaaccaactaaaggcagagtatgaagggctgcattcacacact
aaagagctgaaaacttccttgaacaactctcagctggagttgaatcgttggcaagctcgc
tatgatgagctgaaagaacagcaccagtccatggatatctctctcaccaagctggataac
cactgtgagctcctgtcccgtctaaagggcaatctggaagaagaaaaccatcatctcctg
agtcagattcagatgctgagccagcagaatcagatgttattggagcagaacatggagagc
aaggagcaatatcatgaagaacagaaacagtacattgataaattgaatgccttaagaaga
cacaaggaaaaacttgaagagaagataatggatcagtacaagttctatgatcctgctcca
aaaaagaaaaacccctggattggagccagagccttagtcaaattaatcaagccaaagaag
gagactccaagggagcggttgaaaccagcagcagaaagctccatgtggtattctgaatcc
ccagagatgataaactctccatctgcctcccaaaaattgaaacatcaacacgaggctcag
gataatacctctcaagggtcaaaccctggggaggagagagagaaccctgggggctcttca
aacaaagtgctaatggacctaaagcaaaaaaggaattcccatcacggaggcagcaatgat
aacggtgaaatctcagcagactctgcaacaaaacccagctgtgtggaaatggatgccagg
acttactcaacctcagctattcatgtgcacacttccactcccatctcccggctccagagc
aggccaaaaggctataattcagaagataatctgtgtgagcagtccccagaggtcgagttt
gcaaacaccaggcggcatgtgtccaggccaaacagtttagagagcagtaggaacgcttcc
agcagtagttcacctctcaatttgaaaggttccttagaccatatccatggtagaactgag
agcctcaacagtgaagatttggtgccaagcagagaggcaccagtcttgctccgagacacg
tattctcttcactctgctgctgctttcttaagccctggcagcaggcatgagctctcctcc
cacaggaatgatttgatgtcctgtgatgtacctcagaagagcaatccatctcagtctcac
tcaggcaggcagcggtctgcctcgcctggcagtgagatggtaactttggaagagttcttg
gaagagagcaacaggctgtctctacaaagtcatcggcgcagtttaaatgagagtgaaatg
atttcattgcaccagtttctgttagaagcagattcactgtatccctcttgctacttccca
tgtccttgcattcatcaggaacattcgcagtcactcgaatcggtcctcagtgtttcatat
cccgacagcgtgaggcacagaacaggcaggggaaataggagatctgcttcattctatatt
cccaggggcccctccactaacagagatgacttgctcagcgattattttaggaaagcaaat
gagccttcagctactgggaacttgctggttcagccttccagaaaggaggctggtaagatg
cccactagtcttgttgctccaactgtgaagatggctgtggctggtgaagaaggaagaaca
gctaagcctgacaattacatgaagccaaacctcagacaagttgaacctgatgctctggca
aacccccaagggtcccttaagcttcctcacacaccacagcaccagtctgccagcggggtg
cggcagatggcacagcctcagcagcctggaaccgtgagcaggaggagtacctcactgaac
agggcatttagcttggcctctgcagacctcctcagggctgctggcccagaggcctacagg
caggagagccctcagaagtcaggagcagagctgcatgggggcagggacactgtctgtcag
agcaccagggcttctgtgccaacgaactcccaggcacccttaagagagaggccgcagtct
gcaaaagccgcaagttctgtgcaaggtgtcgattcccgctgtcggcagctcgatgtgagg
cgcctttccctggtcccaccaaaagatgagaggccactctccttccatcagttctctgcc
tcacccactgcatccaccagcagtctgaatgtccagcagcaagagcgtgtgaaccctggg
cagcactactcatctgcatcccatactccctcaaaagtcaagcccaggtcagcgcctcgt
actgaggacgtggccacagtggcccctgccagagctgtttgcagcagcactgagggaatt
acttccccagggcaaggccagggtgatgcccttcttactaagtgccagggtaagctgcta
gaaagcagctctggggctgtagaggagacggtgagagcaggcagctccaacagcactcct
gggtctcctgacccccagggggatcagcagactgtttggtatgagtatggctgtgtgtaa
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integrated database retrieval system
