KEGG   Ficedula albicollis (collared flycatcher): 101818200
Entry
101818200         CDS       T02815                                 
Symbol
NLE1
Name
(RefSeq) notchless homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:fab03009]
    101818200 (NLE1)
Ribosome biogenesis [BR:fab03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    101818200 (NLE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_Aladin ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th DSE1_N Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_WDR75_1st ASA1 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR36-Utp21_1st NBCH_WD40 NLE CFAP251_N WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_VPS8 PAC11 Beta-prop_DCAF12 Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Tricorn_2nd Beta-prop_HPS5 TRM82_WD eIF2A Beta-prop_SPT8 Ge1_WD40 WD40_RFWD3 RMC1_N PD40 Beta-prop_WDR75_2nd Beta-prop_NWD2_C Cytochrom_D1 FAD_binding_9 PALB2_WD40
Other DBs
NCBI-GeneID: 101818200
NCBI-ProteinID: XP_005056736
LinkDB
Position
19:8430003..8441042
AA seq 479 aa
MSPEEEDVQRLLIQFRDEAGECLGSPFDVPVTITPDKLQLVCNALLEKDEPVPLAFFVHD
AEIVASLEKTLAGQSVETEKVLDIIYQPQAVFRVRAVTRCTSSLEGHTEAVISVAFSPTG
KYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPA
TGSQIGRVLSGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTSHT
QSVTCVKWGGDGLLYSSSQDRTIKVWRSQDGVLCRTLQGHAHWVNTMALSTDYVLRTGAF
EPAEATINPQDVRGSLSELKDRALQRYNQVRGQEPERLVSGSDDFTLFLWRPAEDKKPLE
RMTGHQALINQVLFSPDTRIIASASFDKSIKLWDGRTGKYLTSLRGHVSAVYQIAWSADS
RLLVSGSSDSTLKVWDAKTKKLAIDLPGHADEVYAADWSPDGQRVASGGKDKCLRIWRR
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgtcgcctgaggaggaggatgtgcagcggctcctgatccagttccgcgatgaggcaggg
gagtgcctgggctcccccttcgacgtcccggtcaccatcactcccgacaagttgcagctg
gtctgcaacgccctcctagagaaggatgagccggtgcctctggccttcttcgtccacgat
gccgagatcgtggcgtcgctggagaagaccctggcagggcagagtgtggagacagagaag
gtcctggacatcatctaccagccgcaggcggtgttcagggtgcgggcggtgacgcgctgc
accagctccctggagggacacaccgaggccgtcatctccgtggctttcagccccacggga
aagtacctggcgagcggctctggggacaccactgtccgcttctgggacctcagcacggaa
acgccgcagttcacagctaaaggtcaccggcactgggtgctcagcattgcttggtcacct
gatggcaagaaactggcctcaggctgcaagaacagccagatctttctctgggacccagcc
actggcagccagatcggccgggtgctctctggccactccaaatggatcacatgtctgtgc
tgggaaccactccacataaatccagagtgccgttacctggccagtgcctccaaggacggc
agcatccgcatctgggacacgctgatgggcaggtgtgacaaaatcctcacaagccacacg
cagtcggtgacctgtgtgaagtgggggggcgatggcttgctctactcctcctcccaggac
aggaccatcaaagtctggaggagccaggatggggtcctgtgccgcacgctgcagggccac
gctcactgggtgaacaccatggccctgagcaccgactacgttctccgcaccggcgccttc
gagccggccgaggccaccatcaacccccaggatgtcagaggctccttgtcagaactgaaa
gacagggcactgcagaggtacaaccaagtccggggccaggaaccagaaaggctcgtctct
gggtcagatgatttcaccctgtttctttggagaccagcagaagacaagaagccactggag
agaatgacaggccaccaggcattgattaaccaagtcctgttctccccagacacccggata
atagctagtgcttcctttgacaagtccataaagctctgggatggtaggacaggaaagtac
ctgacgtcgctgaggggccacgtgtcagccgtgtaccagatcgcctggtcagccgacagc
cgcttgctggtgagcggcagcagcgacagcaccctcaaggtctgggatgccaagacaaag
aaactggccattgatctgcctggccatgcagatgaggtgtacgcagcggattggagcccg
gacggacagagggtagcgagcggagggaaggacaagtgtttgaggatatggcgtcgatag

DBGET integrated database retrieval system