Ficedula albicollis (collared flycatcher): 101818282
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Entry
101818282 CDS
T02815
Symbol
COL8A1
Name
(RefSeq) collagen type VIII alpha 1 chain
KO
K23455
collagen type VIII alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
101818282
NCBI-ProteinID:
XP_016151957
UniProt:
U3JTC6
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Position
1:complement(99499825..99588787)
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AA seq
739 aa
AA seq
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MVMLLFPVQLLAVAATVYLELVRSAQGGAYYGIKQLPPQVPQYQPLGQQVPHMPLGKEGI
PMQHLGKEMPHMPYGKEYPHLPQYRKEVPQMPMLGKDMAPKKEKEIPMRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGIGKPGLPGMPGKPGVMGPPGPRGEMGPKG
EIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGIPGIPGPKGEKGV
GIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGAPG
IQGPPGPPGIGKPGQDGMPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERGVG
GLPGPMGPKGEKGHAGPPGMGGPPGEPGQPGLPGIMGPPGAAGFPGPKGEGGAVGPPGPV
GPKGEPGLQGFPGKPGFPGEVGGPGLRGLPGPTGPKGEAGHKGLPGLPGVPGLVGPKGEP
GLPGAQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGMPGPPGFPGVGKPGAAGLQGPPG
KPGALGPPGQPGLQGPPGPPGPPGPPVIIPPTPPTAGQYLPEAGPGIDGLKPPYGYKGKK
GKAGGVVYEMPAFTAELLTPFPRVGVPVKFDKLLYNGRQNYNPQTGIFTCEIPGVYYFAY
HVHCKGANVWVALYKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDKVYVQMPSEQAAG
LYAGQYVHSSFSGYLLYPM
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggtcatgctgctcttccctgtgcagctgctggcagtggctgccactgtttatctagag
ctggtgaggtctgctcaaggtggtgcctactatgggatcaagcagctgccacctcaggtg
ccccagtaccaacccctcggacaacaagtacctcacatgccactgggcaaggaaggcatc
ccgatgcagcacctgggcaaggagatgccccacatgccctatgggaaggagtacccccac
ctgccccagtacaggaaggaggtcccacagatgcccatgctcggcaaggatatggctccc
aagaaagagaaagaaattcccatgcgcagtctgaggggtgagcaaggccccccgggtgag
cctggaccaagagggccaccagggccaccaggattgccaggtcatggtgtaccaggagcc
aaaggaaaaccaggcccacaaggatacccaggaattggaaagccgggtttgccggggatg
ccaggaaaaccaggggtcatggggcccccagggccaagaggggagatggggccgaagggg
gagatcgggcccatggggatccctgggccgcaaggaccgccagggcctcacgggcttccc
ggcatcgggaaggcaggcgctccggggctgcaggggcaaccggggccaaagggtgagcct
ggcatgaaggggccaccaggaatccctgggatcccggggcccaaaggggagaagggggtc
ggcatcccgggcttgccgggtctgaagggtccacccgggctgcctggtccccctggcccc
gtggggctgccgggggttggcaaaccgggcatggttggcttccctggcccgcagggaccc
ctgggcaaacccggacccccaggagagttagggctgcaggggcctccaggggccccaggg
atccaaggccctcccggcccgcccggcatcggcaaaccgggccaggacggcatgcctggc
cagcccggcttcccgggcggcaaaggggagcagggactgccggggctgccggggcccccc
ggcctccccggggttgggaagccgggcttccccgggcccaaaggggagcgcggtgtgggc
ggtctgcctggccccatgggcccgaagggggagaaggggcacgcggggccgcctggcatg
ggagggccaccgggggagcccggccagccaggactgccgggcatcatgggccccccgggg
gccgccggcttcccgggacctaaaggggaggggggtgccgtagggccaccgggaccagtc
ggccccaagggagagcctggcttgcagggttttccaggaaagccaggctttcctggggaa
gtgggcggccctgggctgcgggggctgccgggccccacaggacccaagggggaggccgga
cacaaaggcttgccggggctgccgggtgtcccagggctcgtggggccgaagggcgagccc
gggctccccggcgcccaggggcttcagggcccctcgggcatcccgggcatcgcgggaccc
agcggtcccatcggcccccccgggctgccaggggccaagggcgagccgggcatgcccggc
ccccccggcttccctggggtaggcaaacccggtgctgcagggctgcagggacccccggga
aagcctggggcgctcggtcctcccggccagccggggctccaggggccgccgggcccgccc
gggcccccagggccgccggtcatcatcccgcccaccccaccaaccgcgggacagtacctg
cctgaggcggggccgggcatagacggcctcaagcccccctacggctacaaaggcaagaaa
ggcaaggctggcggcgtcgtctacgaaatgcccgcgttcacggcagagctcctcacgccc
ttcccccgcgtcggggtgcccgtgaagttcgacaagctcctgtacaacggccggcagaac
tacaacccccagacgggcatcttcacctgcgagatccccggcgtctactacttcgcctac
cacgtgcactgcaaaggcgccaacgtgtgggtggcgctgtacaagaacaacgagccgctc
atgtacacctacgacgagtacaagaagggcttcctggaccaggcttcgggcagcgccgtg
gtgcagctgatgcacggagacaaggtttacgttcagatgccatccgagcaggcggcagga
ctctatgccgggcagtacgttcattcatctttttcagggtatttattgtatcccatgtaa
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