Ficedula albicollis (collared flycatcher): 101818500
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Entry
101818500 CDS
T02815
Symbol
CAPRIN2
Name
(RefSeq) caprin family member 2
KO
K18744
caprin-2
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101818500 (CAPRIN2)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101818500 (CAPRIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
101818500
NCBI-ProteinID:
XP_005040071
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Position
1A:complement(57709265..57743965)
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AA seq
1151 aa
AA seq
DB search
MVQLSQAPFHRPSSPSGRSEEGEEKRMKAAKQQVTPAGESPAPASPLQSALSTAASPSQA
YEIYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKKGETLNQDQLEAVEKYDEVVHNLEFA
KELQKTFSGLSQDLLKAQKKAQRRESLLKLEAEKKKLRTILQVQYVLQNFTQEHVQKDFK
GGVNGAIYLPSKELDYLIRFAKLTCPERNENLSVEDQMEQSSLYFWDLLEGSEKPVVGTT
YKHMKDLLAKLLDSGYFESIPTPRTAVPVKELEEEVNRKPEKTRHLSKGESAKEPESIME
LMKSEIQPQEFLNRRYLPEAEYTVKKKPEEPRSWEAECARKQEPPKSWEMLVDIKEQEQK
QKQETLKPWEARVRQQELKRPDSPKPWEACVKEEEQKRESAKPWETRVEEEQQKKPEAPK
AWVARVREEQESPKPWVAKVREEQDQKKQESPKPWVTKVREEQEQKQQEPSKPWVTKVKE
EPEEKQESPKPWVTQTREQPEQKKSDSMKTWEVPVREEPEQKKQEPVKAWAAHVREEPEQ
KKQETREAWEKADRQQQVSSPQIQNPPKSWAAASMGPKEQMGPKKFDMEPKERRDRKPKV
ECEIKKVPKPVHQPAAEFCSTSTLPKDPVLRREKLQDLMTQIQGTYNFMQESILDFDKAS
PSAIGSSQPPSVTPASSPVVSKEQKLPSQSDFLQQPLQAAASSMALHGSNTSLASPDPAL
SGSETEDLVTPQATILLPSEPQSPLPTSSTPMPSVPPAQSFQSPPASSSSVTITAAPFQA
MQTVFKVNAPLPPRKDQEIKEDSSYSAGYNQNFSTASTQTPPQCQLQSSHVAEQTSLSQE
SLSSAVNYQPDGAVPVSNGSLAFYPAQANVIPRPPQPYLNSRGSFRGSARGGRSLANSYR
SPGGYKGFDAYRGSPSLTNGNYGQLQFPGRDYAGMPYSQRDINYQQCYKRGGISSGPRAS
SRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSITPVDMPVTSQAATILPVHVYPLPQQM
RVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDIQFGRFNCPVNGTYVFIFHMLKLAV
NVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLFQGDQIWLRLHRGAIYGSSWKY
STFSGYLLYQD
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctttcccaagcccctttccatcgtccatcatcaccttcaggccggtcggag
gaaggggaggagaagaggatgaaggcggccaagcagcaggtgaccccggctggggagagc
ccggctcccgccagccccctgcagtccgcgctgagcacggcggcctctccttcccaggcg
tatgagatctacatcgacaacgggctcatctgcctcaaacacaagatcaggaacatcgag
aaaaagaagctcaaactagaagactacaaagatcgtttgaagaagggagaaacccttaat
caagaccaattggaggcagtagagaaatatgatgaagtagtgcacaacctggaatttgcc
aaggagcttcagaagactttttcagggcttagccaagatctgctgaaagcacagaagaag
gctcagcggagagagagtctactgaagcttgaagcagagaagaaaaagctgcgtacaata
cttcaagtccagtatgtgctgcagaacttcactcaagagcatgttcagaaagatttcaaa
ggtggtgtgaatggtgcaatatacttgccttctaaagaactagactacctcataagattt
gcaaaactgacgtgtccagaaagaaatgagaatttgagtgttgaagaccagatggaacaa
tcatctctctacttctgggaccttctagaaggaagcgagaaacctgtggttggaacaaca
tataaacacatgaaggacctgttagccaaacttttagactctggctactttgaaagtatt
ccaactcctcgcaccgctgtgccagtaaaagaattggaagaagaagtaaatagaaaacct
gagaaaacaagacacctgtcaaaaggagagtctgccaaagaaccagaatccattatggag
cttatgaaatctgaaatacagccacaggagtttctcaacaggcgttatttgcctgaagca
gaatacactgtcaagaagaagccagaagagcccagatcttgggaagccgagtgtgctaga
aaacaagaacctccaaagtcctgggagatgcttgttgatattaaagagcaggaacagaag
cagaaacaagagaccttaaagccttgggaagctcgtgttagacagcaagaactaaaaaga
ccagattctccaaagccttgggaagcttgtgttaaagaggaggaacagaagcgtgagtct
gcaaagccctgggagacccgtgtggaggaggaacaacagaagaagccagaagctccaaag
gcatgggtagcacgtgtccgagaggagcaggagtctcccaaaccctgggtagcaaaggtc
agagaagagcaggaccagaagaaacaggaatcaccgaaaccatgggtaacaaaagttagg
gaagagcaggaacagaaacagcaggagccctcaaaaccttgggtaaccaaagttaaggaa
gaaccagaagaaaagcaggaatctccaaaaccttgggtaacccaaactagggagcaacca
gaacaaaagaagtcagactccatgaaaacatgggaagtgcctgttagggaagagccagag
caaaagaagcaggagcctgtgaaggcttgggctgcacatgttagggaggagccagaacaa
aagaagcaggagactcgagaggcttgggaaaaagctgacaggcagcagcaagtgtcatca
ccgcaaatacagaaccctccgaagtcctgggcggctgccagtatggggccaaaggaacag
atggggccaaagaagtttgatatggaacccaaagaaaggcgggaccgcaaaccgaaggtt
gaatgcgagattaaaaaagtgcctaaacctgtacatcagccagctgcagaattttgctct
acttcaactcttccaaaagatccagtattgagaagggaaaaacttcaggatctgatgact
cagatacaagggacttacaacttcatgcaagagtccattctggattttgataaagcttca
ccaagtgccattggttcatcccaacctccttcagttactccagcaagtagtcctgtagtt
tcaaaagagcagaaactgccaagtcagagtgattttcttcaacagcctcttcaggctgct
gcttcatccatggcgctgcatggttcaaacacttccctagcatctcctgatcctgctctt
tctggctctgaaactgaagacttggtgacaccacaggcaactattctcctcccaagtgag
ccacagtcgccattgcctacttcaagcacccccatgccatcagtgccaccagcgcaaagc
tttcagtctcctccagcaagcagcagttctgtcacaataacagcagctccctttcaggct
atgcagactgtatttaaagtgaatgcaccactgcctccacgtaaagaccaggaaataaaa
gaggattcttcgtattcagcgggatataaccagaatttttccacagcaagtacacagact
cctcctcaatgccagttgcaatcttctcatgttgcagaacaaacctctctttcacaagaa
tcgctgtcctcggcagtgaattatcaacctgatggagctgttcctgttagcaatggtagc
cttgccttttatccagcacaggctaatgttattcccagaccccctcagccctacctcaac
agtcgtgggtctttcagagggtctgctagaggtggaaggtcactggctaattcatatcgc
tcccctggtgggtacaaaggttttgatgcttacagaggttcaccttcattaactaatggc
aactatggccagctacagtttcctggtagagattatgctggaatgccatattctcagagg
gatattaattaccagcagtgctataaacgaggtgggataagtagtggtcctcgagcaagt
tcaagagcagggtggagcgactcctctcaggtgagcagcccagaacgagacaatgagacc
tttaacagtggggactctgggcagggagactcccgcagcatcacccctgtggatatgcca
gtgacgagccaggctgccaccatactcccagtgcacgtctacccgctcccacagcagatg
agagttgccttctctgctgctcgaacatccaacctggcccctggaactctggaccagccc
attgtatttgacctgttgctgaacaacctcggagaaacttttgatatccagtttggtagg
ttcaactgtccagtgaatggtacctatgtcttcatcttccacatgctgaaactggctgta
aatgtccctctgtatgtgaatctcatgaagaatgaagaggtccttgtgtcagcatatgca
aatgatggggctcctgaccatgaaacagccagtaaccatgcagtcctgcagctgttccag
ggagatcagatctggctacggctgcatcggggggccatctatggaagtagctggaaatac
tccaccttttcaggatacctcctttatcaggactaa
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