Ficedula albicollis (collared flycatcher): 101818505
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Entry
101818505 CDS
T02815
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fab03400
]
101818505 (SMC6)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
101818505 (SMC6)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
BRE1
AAA_29
FtsK_SpoIIIE
NPV_P10
Phage_tail_APC
Motif
Other DBs
NCBI-GeneID:
101818505
NCBI-ProteinID:
XP_005044431
UniProt:
U3JGJ5
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All DBs
Position
3:complement(105457610..105491736)
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AA seq
1095 aa
AA seq
DB search
MGKRKEESVLNPGSQKRQRKEYTDVHNNESSDEETLELSPNGSPSSQSPDGEVGIIESIQ
LKNFMCHSNLGPFQFGSNLNFVVGTNGSGKSSVLTALIVGLGGKATATNRGSSLKMFIQK
GETSADISITLRNQGRDAFKPELYGTSITVNQRINQDGSRTCKLKSKSGTIISSKKEELI
GILDHFNIQVDNPVSVLTQEMSKQFLQTKNEGDKYKFFMKATQLEQMKEDYSFIGKTKKN
THVQIEQGEERLEELKQLYLEKKETFKSIAFVNDMQNRLKDLKHQMAWAVVSETEKEIEL
LQEGIRAEEGNTELLQKVEECQVKVNEAEKKYKTIQDKLITVSEEAQALHPQCISLKAEV
QAKRKAVNETEIVYNRSRTELKRLEKDREQLRKRIEELKSCANKVSEPEKLERQRRIAHL
REQLKAFHDEEIMIGQQVDQFQQAISRCREEHSRLRRESSEVQQALDAQQKQLRDLKDSK
TNTLKRFGPHVPAFLEAVEAAYRQGRFRKKPLGPLGALIHPKDPELILAIESCLKGLLQA
FCCDNHSDERTLQLMMSKFYSRGHRPQIIVSKFQNKIYDTSQRAVHHPEFPSVLTALEID
NPVVANCLIDMRGVETVLLIKDSRRAREVMQCNRPPKNCREAFTAEGDQVFERRYYSSNF
VRPKFLSQDVEAEISHLDKEIENKRSQLTASHQRLHSIENEIRQNEDHLCGHRRHQKQLQ
VKVRTANAEIADLENMEEHQSADIHILQDEAEENKGRMESVKQDMQLQSRKMEELKNSLQ
AAEKKLEEVKEKIHQVEEIAGPIKAELNQAESEVENCKCHLQHYKDKQREHEACINKHKD
LLASKGKELEEKMAKARQIFSERIKVSRTVKSLDAEMNRLREKINLESSHHGNREEIIQQ
FHYAKERYEDASNKVKNLRRFIAALDKVMTERLKAYRQFLRNLSMQCKLHFEHLLRVRGC
SGHINFDHKNETLSITVQPREQEKTARSDLRSLSGGERSFSTVCFILSLWNISESPFRCM
DEFDVYMDMVNRRIAVDMILERADFQRHRQFILFTPLSMSSLPTSPHIHILRMPDPPRDQ
RTLNFQNRNDRDEDQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagagaaaggaagaaagtgttttaaatcctgggtcccagaaaaggcagagaaaa
gaatacacagatgtgcataataatgaatctagtgatgaagaaactttagagctctcacct
aatggtagtccctcttcacagtcgcctgatggtgaagttgggataatagaaagtatccag
ctgaagaatttcatgtgccattcaaacctggggccttttcagtttggatcaaatctcaat
ttcgttgttggaaccaatggaagtggaaaaagctctgtgttaacagcactaattgttgga
cttggtggaaaagccactgcaactaacagaggttcctcattaaaaatgtttattcaaaaa
ggagagacttctgcagatatttccataactttgcggaaccaaggaagagatgcatttaaa
cccgaattgtatggaacctctattactgtgaatcaacgcattaatcaggatggaagcaga
acttgcaaactgaaaagcaaatctgggaccataatttcttcaaagaaagaggaactcata
ggaatactggatcactttaatatacaggtagataatcctgtgtctgttttaacccaagag
atgagtaaacagtttttacagactaaaaatgaaggtgacaagtacaagttttttatgaag
gcaactcagctggaacaaatgaaagaagattattcatttattgggaaaactaaaaaaaat
acccacgttcagatagaacaaggggaagagcgtcttgaagaacttaagcagctatatttg
gagaagaaggaaactttcaaaagcattgcatttgtgaatgacatgcaaaatcgtctcaaa
gatttgaaacatcagatggcgtgggcagtggtgagtgagacggaaaaggaaatagagctg
ctccaagaaggcatcagagctgaagaaggaaatacagagctccttcagaaggtagaagaa
tgccaggtaaaagtgaatgaagcagaaaaaaagtacaaaacaatacaagacaaattgata
acagtaagtgaagaagcacaagctcttcatcctcagtgtatttctttgaaggctgaagtg
caggcaaaaagaaaagcagtcaatgaaactgagattgtttataatcgttccagaacggag
ttaaaacgtctggaaaaagacagagaacagctacgtaaacgaattgaagaactgaaaagc
tgtgcgaataaggtttcagagccagagaaattggaaagacagaggagaattgcgcaccta
agggaacagttaaaggcattccatgatgaagaaataatgattggtcagcaggtggatcag
tttcagcaggctatatctaggtgtagggaggaacattctagactgaggagagaaagcagt
gaagtgcaacaagcactagatgcccagcagaaacagctgagagacttgaaggatagtaaa
acaaacactttgaaaagatttggaccacatgtaccagcatttcttgaagcagttgaagca
gcctatagacaaggacgctttagaaagaaacctcttgggcctttaggtgctttgattcat
ccaaaagatccagaactgatcttggctatcgaatcctgtttaaaaggcctacttcaggca
ttttgctgtgataatcatagcgatgaaagaactctccagcttatgatgtcaaaattttat
tcacgtggacatagacctcaaataattgtcagtaaatttcagaataaaatttatgatact
agtcagagagctgttcatcatccagaattcccatcagttctgacagcattggaaatagat
aatccagtggttgccaattgtttgatcgatatgaggggtgtagaaacagtgctgctgatt
aaagatagccgtagggctcgggaggtaatgcagtgcaatcggcccccaaaaaactgtaga
gaagctttcactgctgaaggtgatcaagtatttgaacgacggtattactcttccaatttt
gtcagacccaagttcctaagtcaagatgttgaagcagaaatcagtcacttggataaagaa
attgaaaacaaaaggtcacagttgacagcctctcatcaacgcttacattccattgaaaat
gagatcaggcagaatgaagatcatctctgtggtcatcggcgacaccaaaaacagctacag
gtaaaagtaagaacagcaaatgcagagatagctgatcttgaaaacatggaagaacaccag
tcagcagacatccatatattacaagatgaagctgaagaaaataaaggtaggatggaatct
gtaaaacaagacatgcagctacaaagtagaaaaatggaagaactgaaaaatagtctccaa
gcagctgaaaaaaaattagaagaagtaaaagaaaaaattcatcaagtagaagaaattgct
ggcccaattaaggctgaattaaaccaggctgagtcagaagtggaaaactgtaaatgccat
ttgcagcactataaagacaaacagagagaacatgaggcttgcataaataagcacaaagat
ttactagcttccaaaggaaaggaattagaggaaaaaatggcaaaagcaaggcaaatcttc
tcagagcgcatcaaggtcagcagaactgttaaaagtcttgatgcagaaatgaatcgcttg
agagagaagataaatttagaaagcagtcaccatggaaacagagaagaaataatccagcaa
tttcattatgcaaaggaaagatacgaggatgcaagcaataaagtaaagaatttaaggaga
tttattgcagcgctggacaaagtaatgacagagaggctcaaagcgtatcggcagttccta
aggaacctttctatgcaatgcaaactccactttgagcacttactacgtgttcgaggttgc
tctggacatataaattttgatcacaagaatgagacactttccataacagttcagcctcga
gagcaagaaaaaactgcccgtagtgatctgcgatccttatctggaggtgaacgttccttc
tccacagtttgtttcattctttctctgtggaacatttctgaatctcctttcagatgcatg
gatgaatttgatgtctacatggatatggttaacagaagaattgctgtcgatatgattctg
gagagggctgactttcagcggcatcgacagttcattttgttcacccccctgagcatgagt
tctctgcctacgagtccccacattcacatcctccgcatgccagaccctccaagagaccaa
agaacactgaatttccaaaataggaatgacagagatgaagatcaataa
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