Ficedula albicollis (collared flycatcher): 101818674
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Entry
101818674 CDS
T02815
Symbol
SUPT6H
Name
(RefSeq) SPT6 homolog, histone chaperone
KO
K11292
transcription elongation factor SPT6
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101818674 (SUPT6H)
03036 Chromosome and associated proteins [BR:
fab03036
]
101818674 (SUPT6H)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101818674 (SUPT6H)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101818674 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
101818674
NCBI-ProteinID:
XP_005056844
UniProt:
U3JV64
LinkDB
All DBs
Position
19:7231619..7252123
Genome browser
AA seq
1719 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEGSDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEVPVAPQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEETEGETRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSFSRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
MYVKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGDNHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKSKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSSQSQPSSSSRQRQQPKTNTHAAIDWGKMAEQWLQEKEA
ERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggagagcgaagcagaggagtcagaggaagagtacaaccaggatggg
gaggttgtacccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggagctgaacctcgatgatcaggatgagcaggggaacctgaaaggattcattaacgat
gatgatgatgaggaagaagaggaggaaggcagtgactctggagactccgaggatgatgtt
ggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgactttgacctc
attgaagaaaacttgggtgttaaagtcaaaagacaaaaattcaggcgtgtgcgaaaaatg
tctgatgatgaggacgatgaagcagaggattatggaaaggaagaacatgagaaggaagcc
attgctgaagagatctttcaggatggtgaaggcgaggaaggaggggaggctgtggaagtt
cctgttgctccacaggaagaggaagaggaggaggaggaagatgaatctgacattgatgac
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggaggaagaagcttcca
ggatacacagatgctgctttgcaggaagcccaggaaatctttggtgtggattttgactac
gatgagtttgagaagtacaatgagtacgacgaggagatggaggaggagtatgaatacgag
gatgaggaaaccgaaggggagacacgcgtgcggcccaaaaaaacgaccaagaaacgtgtc
agtcgccgcagcatcttcgagatgtacgagcccagtgagctggagagcagccacctcaca
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagctgagatccatc
ccagtgaagagtgctgaagatgatgagctggaggaggaagctgactggatttataggaat
gcatttgcaacgcccaccatctccttgcaggaaagttctgactaccttgaccgtggacaa
gccagcagcttcagccgcaaggggcccagcaccattcagaagattaaagaagccctgaat
ttcatgaggaatcagcattttgaggtcccgttcatcgccttctacagaaaggagtatgtg
gagccagagctgcacatcaacgacctgtggagggtctggcagtgggatgagaagtggacc
cagctgaagatccgcaagcagaacctgacacgactgtttgagaagatgcaggcctaccag
tatgagcaaatctctgctgacccagacaagcccttggctgatggaataagggccttggat
actactgacatggagaggctgaaggacgtgcagtccatggacgagctgaaggacgtgtac
aatcacttcctgctgtactacgggagagacattcccaagatgcagaatgctgccaaggcc
gctcgcaaaaagcaaaagcggatccgggaggatggtgaagaggaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccgaagggatatg
tacaccatctgccaggcagctgggctggatggcttggctaagaaatttggtctgacacct
gagcagtttggagagaatctccgagacagttaccagcgtcacgagacagagcagttccct
gcagagcccctggaactggccaaggattatgtgtgtagtcaattcccaagcccggaagca
gtgctggaaggagctcggtacatggtggctttgcagattgccagggagcccttggtcaga
caggtcctgagacagactttccaagaacgagccaaaatcaacatttcaccaaccaaaaaa
gggaagaaggatattgatgaagcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgagagacgaccagttcctgaaaatgagcctggcagaggatgaggca
ctgctcaccatagatatcagcattgacatgaaaggagtggagggttatggcagtgaccag
acatactttgaggaaatcaagcagttctattaccgggatgagttcagtcaccaggtgcag
gagtggaatcggcagcgcaccatggccatcgagcgctccctcaaccagttcctctacgtg
cagatggccaaagagttaaagaacaagctcttagtggaggccaaggaatatgtcctcaag
gcttgcagccgcaaactgtacaactggctgaaggttgctgcgtacaggccagatcagcaa
gtggaggaagacgatgatttcatggatgaaaaccaagggaaggggatccgggtgctgggc
attgcgttttcatcagccagggaccaccctgtgttttgtgccctcgttaatggagagggt
gaggtgacagatttcctccgattgccacacttcacaaagagaaggaatgcctggcgtgag
gaggagagagaaaagaaggcccaggatattgaaacattgaaaaaattcctcttaaacaag
aagcctcatgtggtgacaattgcaggcgagaacagggatgctcagatgctgatggaggat
gtaaagagaattgttcatgagctggaccaagggcagcagctgtcctcgattggagtggag
ctggtggataatgaactggccatcctctacatgaacagcaagaagtctgagaatgaattc
cgggattacccccctctgctgcgtcaggccgtgtccctcgctcgccgcatccaggacccc
ctcatagagtttgcccaggtctgcagctctgatgaggacattctctgcctgaaactccac
cctctgcaggagcacgtggtgaaggaggagctgctgaacgcgctctactgcgaattcatc
aaccgtgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccag
gctttgctgcagtacgtgtgcggcctgggaccacgcaaaggcactcacctgctgaagatc
ttaaaacaaaacaacacccgtctggagaacaggacccagctggttacgatgtgtcacatg
ggacccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcatcactgggt
gatagcactgattcctacattgaagtcctagatggctctagggtccatcctgaaacctac
gaatgggcaaggaaaatggcagtggatgccctggagtacgatgagtcagctgaggatgca
aatcctgcaggagctctggaggaaatcctggaaaaccccgaacgcctgaaagacctggat
ctcgatgcctttgctgaagaactggaaagacagggctatggtgacaagcacatcactttg
tatgacattcgagctgagctaagctgcagatacaaggacctgagaaccccgtaccgttct
cccaacacagaggaggtcttcaatatgctgaccaaagaaactccagagacattttacata
ggtaaaatgatcatctgcaatgtgactgggattgcccacaggcgcccacagggagagagc
tacgaccaggcgatacggaatgacgaaactggcctttggcagtgccctttctgccagcag
gacaacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccaggt
caggccattggagtgaagacacgtctggataatggtgttgctggcttcatcccaacaaaa
tttcttagtgacaaggtggtcaagaggccagaagaaagggtgaaggtgggaatgactgtc
cactgccgcatcatgaagattgacatcgagaaattcagtgcagacctgacctgcaggacc
tcagacctgatggacaagaacaatgagtggaaactgcccaaagacacctactatgacttc
gactctgaggcagcagatcacaagcaggaagaagacatgaaaagaaagcagcagaggaca
atgtacgtcaagagggtaattgctcacccatcattccacaacatcagcttcaagcaagca
gagaagatgatggagaccatggaccaaggggatgtgattattcggccaagcagcaaaggg
gataatcatctgactgtcacctggaaggtcaacgatggcatttaccagcacgtggatgtc
cgggaagagggcaaggagaatgccttcagcctgggctccatgctctggattaacacagag
gagtttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcctttgcc
agagacctgttgaaccacaaatactaccaggactgcaatggtggagacaagaagaagctg
gaagagctcctgataaagagcaagaaagagaagccaacatttattccatactttattagt
gcctgtaaagacctacctggtaaattcctcttgggataccagcctcgaggcaaaccaagg
atagagtatgtgacagtgacaccagagggattccgctaccggggccaagtcttccctaca
gtgaatggacttttccgatggtttaaggatcactatcaggaccctgttccaggtatcacc
cccagcagtagcagtcggaccaggactccagcctccattaatgctaccccagctaacatc
aacctggcagatctgacacgtgcagtgaatgctctaccacagaacatgacctcccagatg
ttcagtgccatcgctgcagtgacaggccagggacagaacccaaatgccaccccagcacag
tggggctccagccagtacggctatggaggcagcggaggcggcagcagcgcgtaccacgtc
ttcacaactccagcccagcagccggtggccacccctctgatgactcccagctactcctac
actactcccagccagcccatcaccacaccccagtaccagctccaggccaacaccacaccc
cagtcctcccagtcacagccatcgtccagctccaggcagaggcagcagccaaagaccaac
acccatgctgccatcgactggggcaagatggccgagcagtggctgcaggagaaggaggct
gagcggaggaaacagaagcagaggttgacccctcgcccctctcccagccccatgatcgag
agcacgcccatgtccatcgccggggacgccacgcctctcctggatgagatggatcgatag
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integrated database retrieval system
