Ficedula albicollis (collared flycatcher): 101818689
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Entry
101818689 CDS
T02815
Symbol
FREM1
Name
(RefSeq) FRAS1 related extracellular matrix 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101818689 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
fab04091
]
101818689 (FREM1)
Lectins [BR:
fab04091
]
C-Type lectins
Lecticans
101818689 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Jag_N
Motif
Other DBs
NCBI-GeneID:
101818689
NCBI-ProteinID:
XP_016160575
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Position
Z
Genome browser
AA seq
2183 aa
AA seq
DB search
MKPFKRSCLFLLLPVLLRVVCSSFISVNLGVKVMKGQSVFLSEEDLKFSIPKEKDVCKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDMVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSHALEVPEYYGLSRMIDKNVLTFDYDRKINLDCTISIISSETH
LPAHGQLITRKVQREQFRGDQPWSFFPGMKHSLGQKCRNGSCTLGLEAISNKKMSCEEFL
RMGIQYQHLYPPSPDIDYIPVRLDLSDSRSKTLHKTEYAWLPVRIRGAVPNQIPKAAPMA
KLVLEVDQFILTPITTTTVDAEDNETPKSLLIFNITKPPPQGFITHLSDHTKTVGSFTWK
DLSDMLIAYQPPNNSHTERRNYEVEFEVHDFYFERSLPITVRLSIRTTDTNAPRVSWNTG
LNLLEGQSRPITWQHFQIVDNDDIQNVRLVTVDGLQHGRLSVRGGKGFMFTVSDIQAGVV
CYHHDDSDSTKDFVVFRIFDGFHSIRHKFPINILPKDDSPPFLISNVVIEVHEGQTILIQ
GSMLHASDLDSSDDYILFNITKPSQAGEIMKKPGPNLIGYSVNSFLQRDLFNGMIYYHHL
GGEVFEDSLEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGVTRHLVVKETEISHL
TKKHLHFLDVEEQDRELTYTITTSPFFSCTRGYSDAGKLFMVDTIPKLVKDPAALPLQSF
TQHAVNYMKVAYMPPLQDIGPEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQAPQVF
TNHLRVEEGGMTPITEGHILISDADTKQEHLFLLLQRQPQHGVVELGDIPMHGGDRLSCE
DLRTLAVRYHHDGSETLTDDVFFAATDGIHSVEFILQVKVLPVNDELPVMQTGLVPVLHC
LEGEEVVLSSEYIHATDADSNDMELTFLLARQPCHGAVRKAGIAVQRFSQADVVAGLVTY
KHTGGEIGLTPSIEVLTLIVSDGEAGLDVKDCCYDGPLPPPVSRDDPFPVYDLNITVLPV
DNQPPSIAAGASFVVEEGSSAALTTNHLFATDPDTAADDLEFVLVSPPHFGYIENILPSP
GFEKSNVGISIGSFQLKHLKAMNINYVQARHLRVEPTEDKFVLYVTDGLHRSAETPFFVL
ISPTNDEVPEFIATNITVQEGEMKELDLSVINAVDLDVPQDPLVFEVVQRPSYGFLINGA
HGSDVLHYKQLINHDHHSHGLLVHDFSMELLRSGMKLMYMHDDSENLTDSFKIQLSDGKH
KVLRTISVKVIPVNDETPVLSKKNDIEVNIGETQIISSAVLSAGDKDTPRERIYYLFERL
PENGQLQLKVGQGWVTLRTGMKCTQEELDMNLVRYVHTGTVGSKKKDSFTFYLWDGYNRS
PAVDFYINIKDLEKGDIAIFVKPLRVPKGDRSYVTTDVLLALDGTDKPEELLYVITSPPQ
YGQIEYVSYPGIPIASFSQMDVARQIVCYVHKAKAVVREDTFRFIISNGLRTKHGTFKIL
LEAADQALPTLSRNMGLRIMEGAMALLTPDVLQLSDPDTAKENLTFLLAQLPQYGHLYYH
GAVLLQYNFTQRDVDNGDVAYKHRGGNSQIDRFTFIATDRTNQGFIVNGRVQSEPVAFTI
QVDPLDKMAPKIIHLHCISDVELLKNGNYGIYITARSLRASDPNTEDDKIIFKILRGPHY
GYLENITGGFIQEGFSQKDLNSKIILYVINPSQEVNSDSLEFQVTDASGNSAAPQRLELR
WARIEMLQTEYEVCENTGVVSLKITRAGHSGESAFITVKVNEISARLGKDFTVTPSKLVQ
FDPGVSTKMWNIAITYDGLEEDDEVFEVILSSPVNAVLGARTKAVVKILDSKAGQCSYSR
PSGQSKHDFRGRSTLFPVSLGSSSPSRPGNVSLEGIPLPPSKRMREHGEDVQQEHSLANR
SRTRLRVTGNGRTVHPSSVFRNETDVIFKYHGIVSLKIEDDTSAETNKKAQPQINKAQPQ
INVISSRKTEIPQADKAELAAEPGSRHKDFYSFERACTPDLKGLLHYEESTQKLFQCDGI
TWKFWNSQSKEVTMKKCPSGWTYHEGSCYFLVVNHKVTWNTAAQACREKYLGSLTSVANE
QHMQWLWDFSGRMPFWIGLNDQVNPGHWEWNGGEPVTYINWRRGSYRFPVRGRNCVFVQK
RGKWQATDCKKVKPNSYICSRKL
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttaagagaagctgtttgtttctactgctgcctgtcctgttgagagttgtg
tgctcctcctttattagtgtgaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagaggacctcaagttttccatccccaaagagaaggatgtctgcaaagtagaa
gtggtgattaatgagccaataacacagagggttgggaaacttactccacaggtttttgac
tgtcacttccttcctaatgaagtcaaatatacccacaatggatgtccaattttagatgaa
gacatggtcatgcttcggctgtacaggtttacagaaacagaaacgtttgtagaaacattc
acccttcatgtgcagctacttgagccagactgtaacatcataaaaatgcgctcccatgct
ttggaggtgcctgaatactacggtctgtctaggatgattgacaagaatgtcctcaccttt
gattatgacaggaagataaacctggattgcaccatttccataatttcttcagaaactcac
ctgcctgctcatggccagcttatcaccaggaaagtgcagcgagagcagtttcgcggagat
cagccatggagcttcttccctggcatgaagcacagcctgggccaaaagtgcagaaatggg
agctgtacactgggattagaagctattagcaacaaaaagatgagctgtgaagaatttctg
aggatgggcattcagtatcaacacctttaccccccctcacctgacattgactatattcct
gtgaggttggatctctcagacagcagaagcaaaactctgcacaagacagagtatgcatgg
ctccctgttcggattagaggtgctgttcccaaccaaatacccaaagctgctccaatggca
aagctcgtcctggaagtagatcaatttattttaacccctattacaaccacaaccgttgat
gctgaagacaacgaaactccaaagtctctgcttatattcaacattaccaagccacctcca
cagggctttatcactcacctctccgaccacacaaaaactgttggctccttcacgtggaag
gatctcagtgacatgctcattgcttatcagcctccaaataacagccacacagagaggagg
aattatgaggtggagtttgaggtgcatgacttctactttgaaaggagtttgccaatcact
gtgcgtctttccattaggacaacagatacaaatgcccctcgggtttcatggaacacaggc
ctcaacctcctggaagggcagtcccgacccatcacttggcaacacttccaaattgtagac
aatgatgacatccaaaatgttcgcttggtcacagttgatggattacagcacgggcggctg
tcagtgagaggagggaaaggattcatgttcactgtctctgacattcaggctggagttgtt
tgctaccatcatgatgacagtgattctactaaggacttcgtggtatttagaatttttgat
ggcttccacagtattcgccataagtttccaataaatatcctccctaaagatgatagccct
ccatttctgatcagcaatgtagtcattgaagttcatgagggacagacaatcctgattcaa
ggctccatgcttcatgcttcggacctggattccagtgatgactacatactattcaacatt
accaagccttcacaggctggagaaatcatgaagaaaccaggaccaaacttgatagggtat
tctgtcaacagttttcttcagagggacctatttaatggaatgatttattatcatcatttg
ggaggagaagtatttgaagattcccttgagtttgtgctatgtgatagccatgaccctcca
aatctctcagagccacaggtgatgatggttcacattatccctgtggatgatcagctaccc
agagaagctccaggagtgacccgtcacctggttgttaaggagactgagatttctcaccta
actaagaaacatctccacttcctagatgtggaagagcaagacagggagctcacatacacc
ataaccacttccccatttttctcttgcacccgtggctactcagatgctgggaagctgttt
atggtggacaccatccccaaactggtcaaggatcctgctgctcttccactgcagtcattc
actcagcatgctgtgaactatatgaaagttgcttacatgccacccctgcaggatattgga
cctgaaccccagcaagtccagttcattttttctgtcagcaaccagcatggaggcactttg
tatgggatctgcttcaatattacaattcttcctgtggacaaccaagccccacaggttttt
acaaaccacttgagagtggaagagggcggcatgacccctattacagagggacacattctc
atctctgacgcagacacgaaacaagagcatctcttcctgctcctgcagagacagccgcag
cacggggtagtggagctgggcgacattcccatgcatggaggtgacaggctttcctgtgag
gacctgcgcaccctggcagtcagatatcatcatgacggctctgagactctcactgatgat
gttttctttgcagccacagatggcatccattctgtagagttcatcctgcaggtcaaggtg
ctccctgtgaatgatgagctgcctgttatgcaaacaggccttgttcccgtgctccactgc
ctggagggtgaagaagtagtcctctcctcggagtacattcacgccacagatgccgacagc
aacgacatggagctgacgttcctgctggcccgccagccctgccacggggcagtgaggaaa
gctggcattgccgtgcagcgtttctcccaggctgatgtcgttgctggtttagtcacatac
aagcacactggtggtgagattggcctgactccttccattgaggtgttaaccttgattgtc
tctgatggcgaggctggcctagatgtgaaagactgctgttatgatggacctcttcctcct
ccagtttcacgtgatgatccgtttcctgtctatgaccttaacatcactgtacttccagtg
gacaaccagcctccatcaattgcagccggtgcaagctttgtggtggaggagggctcctca
gcagcccttacgaccaatcatttgtttgccactgaccctgacaccgctgcagatgactta
gagtttgtgctggtttctcctccccactttggttacattgaaaatatactgccttctcct
gggtttgagaagagcaacgttggaataagcataggttcatttcagctgaagcacctgaaa
gccatgaatataaactatgttcaagccaggcacttgcgagtggagccaacagaagacaag
tttgtactttatgtcactgatgggttgcatcgctcagcagagactccattttttgtgcta
atcagcccaaccaatgatgaagttccagaattcatagccacgaatattaccgttcaagaa
ggggagatgaaggagctggatctgtctgttatcaatgcagttgatctggatgtgcctcaa
gaccctctggtgtttgaggttgtgcagaggccctcgtacgggttccttatcaatggtgct
catggcagtgatgttctacactataaacagttaattaaccatgatcaccacagccatggg
ctgcttgttcatgacttttccatggagctactgaggagtggaatgaagctgatgtacatg
catgacgactctgaaaacctcactgacagctttaaaattcagctatcagatggaaaacat
aaagttctcagaaccatttcagtaaaggtcattccagttaatgatgagacaccagtgttg
agcaagaagaacgatatagaggtgaacataggtgaaactcaaatcatttccagtgctgtt
ctgtcagcaggagataaagatacccccagggagagaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtaggacaagggtgggtgactctccgaactgga
atgaagtgcacccaggaagagctggatatgaaccttgtgagatatgtccacacaggaact
gtggggtccaagaaaaaagacagcttcacattttacctctgggatgggtacaacagatcc
ccagctgtggacttctacataaatatcaaggacttggaaaagggagacattgctattttt
gtgaaaccccttagagtgccaaaaggagatcgcagctacgttacaactgatgtcctcctc
gcactggatggtactgacaagccagaggagctgctttatgtgatcacctccccaccccag
tacgggcaaatagagtatgtcagctatcctggcatccccattgcgagcttcagtcaaatg
gatgtagcacgacagattgtctgctatgttcacaaagccaaggcagttgttcgtgaagat
acattcagattcatcatcagcaacggactgaggactaagcatgggacattcaagatcctc
ttggaggcagctgaccaggctttgcccactctatctaggaacatggggttaagaataatg
gaaggagctatggcacttcttactcctgatgtactgcagctttcagacccagatactgcc
aaagaaaaccttaccttcctcttggctcagctcccccagtatggtcatctctattaccat
ggggctgtgctactgcagtacaatttcacacagcgagatgtggacaacggggatgttgca
tacaagcaccgaggtgggaattcccagattgacagatttacattcattgccacagacagg
actaaccaaggcttcatcgtgaatgggagggtgcagagcgagccagtggcattcaccatc
caggtggaccctttggacaaaatggcaccaaaaattattcatctccattgcatttctgat
gtggaactcctgaagaatggcaattacgggatctatattactgccaggtccctgagggca
tctgaccccaatacagaagacgacaaaataatttttaagattttgcgaggtcctcattat
ggctacctggaaaatataacaggtggattcattcaggaaggatttagtcaaaaggattta
aacagcaaaatcatactttatgtcatcaacccatcacaagaagtgaattcagacagcttg
gagttccaagtgacagatgccagtggaaactcagcagcaccccaaaggctggagctgcgc
tgggctcgaattgaaatgctacagactgaatatgaggtgtgcgaaaacacgggagtggtg
tctctgaaaatcaccagggcaggacactcaggagagtccgcctttataactgtgaaggtc
aatgaaatatctgctagactgggaaaggacttcacggtgactccctccaagcttgttcaa
tttgatccaggagtgtcaaccaagatgtggaatatagcaattacctatgacggattagag
gaagatgatgaagtctttgaagtaattctgagctcccctgtgaatgctgttcttggcgca
cggacaaaagctgtagtgaaaattttggactcaaaagcaggtcaatgcagctattcccgt
ccttctggccaaagcaagcatgacttcagggggagaagcacgctgtttccagtttccttg
ggctcctcatcaccttccaggcctggcaatgtttccttggaagggatcccactgccgcct
tccaaaaggatgagagagcacggagaggacgtgcagcaggagcacagcttggcaaatcgg
tcaaggaccaggctgagagtaactggaaatggcagaacagttcatccttcatctgtattt
cgaaatgaaacagatgtaattttcaaatatcacgggattgtatcactcaaaatagaggat
gacacctcagctgaaaccaacaagaaggcacaaccacagataaataaggcacaaccacag
ataaatgtcatctcctccaggaaaacagaaatcccacaggctgataaggcagaacttgca
gctgaaccaggatcaagacataaggacttctactcttttgaaagggcttgtacaccagat
ttaaagggcctcttgcattatgaagaaagcacacagaagttatttcagtgtgatgggata
acatggaaattctggaattctcaaagcaaggaggtaactatgaagaaatgtccctctgga
tggacttaccatgagggcagctgctacttcctggtagtgaatcacaaggtcacctggaac
actgctgctcaggcttgcagagaaaagtacctggggagtttaacaagtgtggctaatgaa
caacacatgcagtggttgtgggacttcagcgggaggatgcccttttggataggtttgaat
gaccaagtcaatcctggacactgggagtggaatggaggagaacctgtaacctacataaac
tggagaagaggctcctaccgctttccagtgagagggagaaattgtgtatttgtgcagaag
cgaggaaaatggcaagcaactgactgcaagaaggtcaaaccaaacagctatatatgttca
agaaagttgtaa
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